Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 9.3e-65 250.0 120 100.0
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 9.4e-41 170.2 86 90.7
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.1e-33 146.7 89 73.0
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 1.6e-32 142.9 89 71.9
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 2.7e-32 142.1 82 74.4
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 1.0e-31 140.2 85 72.9
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.0e-31 140.2 89 68.5
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 3.9e-31 138.3 84 73.8
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 5.2e-31 137.9 91 69.2
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.1e-30 136.7 88 69.3
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.1e-30 136.7 89 71.9
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.1e-30 136.7 88 69.3
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 1.5e-30 136.3 89 67.4
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.5e-30 136.3 86 68.6
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 2.0e-30 136.0 91 68.1
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 4.4e-30 134.8 90 67.8
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 7.4e-30 134.0 82 72.0
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 7.4e-30 134.0 86 68.6
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 7.4e-30 134.0 86 68.6
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.7e-29 132.9 89 65.2
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.2e-29 132.5 86 66.3
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.2e-29 132.5 85 70.6
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.8e-29 132.1 89 64.0
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.8e-29 132.1 86 67.4
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 3.7e-29 131.7 86 69.8
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 3.7e-29 131.7 88 65.9
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 3.7e-29 131.7 88 67.0
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 3.7e-29 131.7 86 65.1
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 4.8e-29 131.3 87 64.4
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 4.8e-29 131.3 87 64.4
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 4.8e-29 131.3 89 66.3
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 4.8e-29 131.3 88 65.9
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 8.2e-29 130.6 89 62.9
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 1.1e-28 130.2 89 65.2
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 1.1e-28 130.2 89 61.8
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 1.4e-28 129.8 82 67.1
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 1.8e-28 129.4 89 64.0
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.8e-28 129.4 89 64.0
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 2.4e-28 129.0 86 64.0
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.1e-28 128.6 85 67.1
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 3.1e-28 128.6 84 67.9
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 3.1e-28 128.6 88 68.2
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 4.1e-28 128.3 89 66.3
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 4.1e-28 128.3 88 64.8
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 4.1e-28 128.3 88 63.6
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 5.3e-28 127.9 82 67.1
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 5.3e-28 127.9 89 61.8
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 9.1e-28 127.1 88 63.6
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.2e-27 126.7 89 60.7
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 1.6e-27 126.3 84 61.9
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 2.0e-27 125.9 88 62.5
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.6e-27 125.6 85 64.7
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 3.5e-27 125.2 84 61.9
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 4.5e-27 124.8 82 65.9
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 4.5e-27 124.8 82 65.9
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 4.5e-27 124.8 88 63.6
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.9e-27 124.4 85 63.5
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.9e-27 124.4 85 63.5
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.9e-27 124.4 85 63.5
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 5.9e-27 124.4 89 62.9
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 7.7e-27 124.0 109 55.0
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 7.7e-27 124.0 84 64.3
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 7.7e-27 124.0 89 62.9
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.0e-26 123.6 89 61.8
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.0e-26 123.6 82 63.4
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 1.0e-26 123.6 87 62.1
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.3e-26 123.2 89 64.0
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.3e-26 123.2 89 64.0
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 2.9e-26 122.1 80 66.2
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 2.9e-26 122.1 84 64.3
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 3.8e-26 121.7 93 60.2
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.0e-26 121.3 88 60.2
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 5.0e-26 121.3 88 60.2
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 5.0e-26 121.3 89 60.7
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 5.0e-26 121.3 89 61.8
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 5.0e-26 121.3 82 64.6
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 6.5e-26 120.9 85 61.2
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 6.5e-26 120.9 89 61.8
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 8.5e-26 120.6 84 61.9
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 8.5e-26 120.6 88 59.1
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-26 120.6 89 60.7
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.1e-25 120.2 88 59.1
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.5e-25 119.8 88 59.1
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 1.5e-25 119.8 87 58.6
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 1.5e-25 119.8 82 64.6
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 1.9e-25 119.4 89 60.7
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 2.5e-25 119.0 85 58.8
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.2e-25 118.6 88 58.0
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 3.2e-25 118.6 88 58.0
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 3.2e-25 118.6 82 63.4
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 4.2e-25 118.2 88 59.1
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 5.5e-25 117.9 84 61.9
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 7.2e-25 117.5 82 63.4
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.6e-24 116.3 88 56.8
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.1e-24 115.9 88 56.8
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 3.6e-24 115.2 89 58.4
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.0e-23 113.6 89 59.6
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 1.4e-23 113.2 89 60.7
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 1.4e-23 113.2 89 58.4
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 1.8e-23 112.8 89 57.3
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 1.8e-23 112.8 89 57.3
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 1.8e-23 112.8 89 57.3
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 1.8e-23 112.8 89 57.3
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 1.8e-23 112.8 89 57.3
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 3.0e-23 112.1 89 58.4
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 4.0e-23 111.7 89 59.6
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 5.2e-23 111.3 89 59.6
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 8.8e-23 110.5 89 58.4
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 8.8e-23 110.5 85 56.5
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 8.8e-23 110.5 82 61.0
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.2e-22 110.2 89 58.4
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.2e-22 110.2 89 58.4
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.2e-22 110.2 89 58.4
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.2e-22 110.2 89 58.4
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 4.4e-22 108.2 89 56.2
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 4.8e-21 104.8 88 55.7
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.3e-20 101.3 111 45.0
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 2.9e-18 95.5 79 53.2
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 8.5e-18 94.0 83 49.4
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 2.5e-17 92.4 63 66.7
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.5e-17 92.4 60 70.0
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 6.1e-16 87.8 74 51.4
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.8e-15 86.3 75 50.7
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 5.2e-15 84.7 60 60.0
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.2e-14 83.6 57 57.9
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.7e-13 79.7 66 56.1
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 9.1e-12 73.9 50 66.0
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.2e-11 73.6 83 37.3
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.6e-11 73.2 56 58.9
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 4.5e-11 71.6 44 68.2
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 5.0e-10 68.2 45 64.4
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 6.6e-10 67.8 55 56.4
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 4.2e-09 65.1 79 45.6
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 5.5e-09 64.7 43 62.8
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 5.5e-09 64.7 43 62.8
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 1.2e-08 63.5 79 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.3e-07 59.3 83 36.1
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 4.0e-07 58.5 71 39.4
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 4.0e-07 58.5 71 39.4
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.4e-06 55.5 74 36.5
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.4e-06 55.5 74 36.5
Zm00001eb233510 Zea mays HOM05D004945 ORTHO05D005536 9.8e-06 53.9 54 46.3


User provided reference genes

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