Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10992 Utricularia gibba HOM05D000532 ORTHO05D002745 5.6e-51 204.5 149 100.0
SalBow6G1768 Salvia bowleyana HOM05D000532 ORTHO05D002745 9.6e-19 97.4 150 66.7
Migut.I01202 Erythranthe guttata HOM05D000532 ORTHO05D002745 5.8e-16 88.2 144 45.8
Prupe.3G023200 Prunus persica HOM05D000532 ORTHO05D002745 1.7e-15 86.7 146 61.6
Manes.06G179801 Manihot esculenta HOM05D000532 ORTHO05D002745 2.1e-13 79.7 150 42.7
Oeu035088.3 Olea europaea HOM05D000532 ORTHO05D002745 2.1e-13 79.7 150 33.3
Oeu038374.2 Olea europaea HOM05D000532 ORTHO05D002745 4.6e-13 78.6 141 41.1
Psat7g265200 Pisum sativum HOM05D000532 ORTHO05D002745 6.0e-13 78.2 43 72.1
FAN09G0230 Fragaria x ananassa HOM05D000532 ORTHO05D002745 1.3e-12 77.0 149 57.0
Hma1.2p1_2954F.1_g330730 Hydrangea macrophylla HOM05D000532 ORTHO05D002745 1.3e-12 77.0 152 54.6
MSTRG.10874 Avicennia marina HOM05D000532 ORTHO05D002745 2.3e-12 76.3 149 60.4
Haze_16180 Corylus avellana HOM05D000532 ORTHO05D002745 3.0e-12 75.9 153 45.1
MD09G1165600 Malus domestica HOM05D000532 ORTHO05D002745 3.9e-12 75.5 148 61.5
QL05p088886 Quercus lobata HOM05D000532 ORTHO05D002745 3.9e-12 75.5 148 62.2
Hma1.2p1_0517F.1_g170830 Hydrangea macrophylla HOM05D000532 ORTHO05D002745 6.7e-12 74.7 151 54.3
Ca_20983_v3 Cicer arietinum L. HOM05D000532 ORTHO05D002745 8.7e-12 74.3 43 69.8
SGA_v2.0_scaffold71G23981 Striga asiatica HOM05D000532 ORTHO05D002745 8.7e-12 74.3 150 62.7
Atru.chr1.2667 Acer truncatum HOM05D000532 ORTHO05D002745 1.5e-11 73.6 153 57.5
Actinidia38810 Actinidia chinensis HOM05D000532 ORTHO05D002745 1.5e-11 73.6 147 36.7
FAN02G0023 Fragaria x ananassa HOM05D000532 ORTHO05D002745 1.5e-11 73.6 149 51.0
Medtr4g005350 Medicago truncatula HOM05D000532 ORTHO05D002745 2.5e-11 72.8 43 69.8
Potri.008G004400 Populus trichocarpa HOM05D000532 ORTHO05D002745 2.5e-11 72.8 46 69.6
Sabra08G0002000 Salix brachista HOM05D000532 ORTHO05D002745 2.5e-11 72.8 46 69.6
CiPaw.01G208800 Carya illinoinensis HOM05D000532 ORTHO05D002745 3.3e-11 72.4 149 62.4
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 3.3e-11 72.4 147 59.2
FvH4_6g36930 Fragaria vesca HOM05D000532 ORTHO05D002745 3.3e-11 72.4 149 50.3
FAN14G4617 Fragaria x ananassa HOM05D000532 ORTHO05D002745 3.3e-11 72.4 149 50.3
Dinv20333 Davidia involucrata HOM05D000532 ORTHO05D002745 4.3e-11 72.0 147 58.5
Duzib192G0258 Durio zibethinus HOM05D000532 ORTHO05D002745 4.3e-11 72.0 46 65.2
TWI12G0399 Tripterygium wilfordii HOM05D000532 ORTHO05D002745 4.3e-11 72.0 147 59.9
Gohir.D10G001900 Gossypium hirsutum HOM05D000532 ORTHO05D002745 5.6e-11 71.6 44 65.9
Gorai.011G002300 Gossypium raimondii HOM05D000532 ORTHO05D002745 5.6e-11 71.6 44 65.9
arahy.Tifrunner.gnm1.ann1.2PI64E Arachis hypogaea HOM05D000532 ORTHO05D002745 1.3e-10 70.5 43 67.4
arahy.Tifrunner.gnm1.ann1.Z9Y3M4 Arachis hypogaea HOM05D000532 ORTHO05D002745 1.3e-10 70.5 43 67.4
CANSAT01G0487 Cannabis sativa HOM05D000532 ORTHO05D002745 1.3e-10 70.5 153 39.9
CiPaw.02G129200 Carya illinoinensis HOM05D000532 ORTHO05D002745 1.3e-10 70.5 43 67.4
FAN05G3653 Fragaria x ananassa HOM05D000532 ORTHO05D002745 1.3e-10 70.5 143 49.0
Lj9C542G7 Lonicera japonica HOM05D000532 ORTHO05D002745 1.3e-10 70.5 42 73.8
Lalb_Chr01g0011661 Lupinus albus HOM05D000532 ORTHO05D002745 1.3e-10 70.5 43 67.4
Solyc06g063340.3 Solanum lycopersicum HOM05D000532 ORTHO05D002745 1.3e-10 70.5 151 57.0
Sopen06g022810 Solanum pennellii HOM05D000532 ORTHO05D002745 1.3e-10 70.5 44 65.9
TPR.G38765 Trifolium pratense HOM05D000532 ORTHO05D002745 1.3e-10 70.5 140 30.7
unitig_748.g8063 Utricularia gibba HOM05D000532 ORTHO05D002745 1.3e-10 70.5 55 61.8
Glyma.08G224800 Glycine max HOM05D000532 ORTHO05D002745 1.6e-10 70.1 43 67.4
Oeu035096.1 Olea europaea HOM05D000532 ORTHO05D002745 2.1e-10 69.7 142 30.3
Glyma.07G002000 Glycine max HOM05D000532 ORTHO05D002745 2.8e-10 69.3 43 67.4
Phvul.010G164300 Phaseolus vulgaris HOM05D000532 ORTHO05D002745 2.8e-10 69.3 48 60.4
Eucgr.J03181 Eucalyptus grandis HOM05D000532 ORTHO05D002745 3.7e-10 68.9 145 42.1
Lj3g0024992 Lotus japonicus HOM05D000532 ORTHO05D002745 3.7e-10 68.9 43 62.8
MD17G1162200 Malus domestica HOM05D000532 ORTHO05D002745 3.7e-10 68.9 147 58.5
Aa31LG8G7070 Aethionema arabicum HOM05D000532 ORTHO05D002745 4.8e-10 68.6 43 67.4
Manes.14G008500 Manihot esculenta HOM05D000532 ORTHO05D002745 4.8e-10 68.6 42 66.7
Thecc.06G056300 Theobroma cacao HOM05D000532 ORTHO05D002745 4.8e-10 68.6 43 67.4
PGSC0003DMG400026510 Solanum tuberosum HOM05D000532 ORTHO05D002745 6.2e-10 68.2 43 65.1
Sed0013930 Sechium edule HOM05D000532 ORTHO05D002745 8.1e-10 67.8 43 65.1
Actinidia21888 Actinidia chinensis HOM05D000532 ORTHO05D002745 1.1e-09 67.4 44 63.6
Nitab4.5_0003757g0070 Nicotiana tabacum HOM05D000532 ORTHO05D002745 1.1e-09 67.4 151 57.0
RcHm_v2.0_Chr2g0149351 Rosa chinensis HOM05D000532 ORTHO05D002745 1.1e-09 67.4 144 60.4
THA.LOC104817846 Tarenaya hassleriana HOM05D000532 ORTHO05D002745 1.1e-09 67.4 43 65.1
AL3G33960 Arabidopsis lyrata HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 67.4
AT3G20260 Arabidopsis thaliana HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 67.4
DCAR_022611 Daucus carota HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 62.8
Thhalv10020782m.g Eutrema salsugineum HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 67.4
Nitab4.5_0002354g0070 Nicotiana tabacum HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 65.1
Sp3g18280 Schrenkiella parvula HOM05D000532 ORTHO05D002745 1.4e-09 67.0 43 67.4
Lalb_Chr25g0278541 Lupinus albus HOM05D000532 ORTHO05D002745 1.8e-09 66.6 42 64.3
VMungo0331G0222 Vigna mungo HOM05D000532 ORTHO05D002745 1.8e-09 66.6 43 62.8
BcaC05g28346 Brassica carinata HOM05D000532 ORTHO05D002745 2.4e-09 66.2 43 67.4
C05p44070 Brassica napus HOM05D000532 ORTHO05D002745 2.4e-09 66.2 43 67.4
BolC5t33129H Brassica oleracea HOM05D000532 ORTHO05D002745 2.4e-09 66.2 43 67.4
CSS0000034 Camellia sinensis var. sinensis HOM05D000532 ORTHO05D002745 2.4e-09 66.2 150 38.0
CAN.G308.16 Capsicum annuum HOM05D000532 ORTHO05D002745 2.4e-09 66.2 44 63.6
Lsat_1_v5_gn_1_39361 Lactuca sativa HOM05D000532 ORTHO05D002745 2.4e-09 66.2 44 63.6
CARHR095870 Cardamine hirsuta HOM05D000532 ORTHO05D002745 3.1e-09 65.9 43 65.1
Lalb_Chr04g0264841 Lupinus albus HOM05D000532 ORTHO05D002745 4.0e-09 65.5 41 65.9
A05p28670 Brassica napus HOM05D000532 ORTHO05D002745 5.3e-09 65.1 43 65.1
BraA05t21743Z Brassica rapa HOM05D000532 ORTHO05D002745 5.3e-09 65.1 43 65.1
Cpa.g.sc176.2 Carica papaya HOM05D000532 ORTHO05D002745 6.9e-09 64.7 149 47.0
GSVIVG01029552001 Vitis vinifera HOM05D000532 ORTHO05D002745 6.9e-09 64.7 147 57.8
Ciclev10032671m.g Citrus clementina HOM05D000532 ORTHO05D002745 9.0e-09 64.3 43 62.8
PGR042G3447 Punica granatum HOM05D000532 ORTHO05D002745 1.2e-08 63.9 44 56.8
vmacro18741 Vaccinium macrocarpon HOM05D000532 ORTHO05D002745 1.5e-08 63.5 42 66.7
Carub.0003s2019 Capsella rubella HOM05D000532 ORTHO05D002745 2.0e-08 63.2 43 62.8
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 3.4e-08 62.4 36 69.4
Cc04_g00040 Coffea canephora HOM05D000532 ORTHO05D002745 3.4e-08 62.4 42 64.3
Rhsim08G0250600 Rhododendron simsii HOM05D000532 ORTHO05D002745 3.4e-08 62.4 46 58.7
BcaB04g19099 Brassica carinata HOM05D000532 ORTHO05D002745 4.5e-08 62.0 43 62.8
C03p51010 Brassica napus HOM05D000532 ORTHO05D002745 4.5e-08 62.0 42 61.9
Peaxi162Scf00207g01630 Petunia axillaris HOM05D000532 ORTHO05D002745 4.5e-08 62.0 43 58.1
BcaC01g03570 Brassica carinata HOM05D000532 ORTHO05D002745 7.6e-08 61.2 42 61.9
A03p41660 Brassica napus HOM05D000532 ORTHO05D002745 7.6e-08 61.2 42 61.9
BolC3t17385H Brassica oleracea HOM05D000532 ORTHO05D002745 7.6e-08 61.2 42 61.9
BraA03t13318Z Brassica rapa HOM05D000532 ORTHO05D002745 7.6e-08 61.2 42 61.9
CsaV3_7G033660 Cucumis sativus L. HOM05D000532 ORTHO05D002745 7.6e-08 61.2 37 64.9
MELO3C024280.2 Cucumis melo HOM05D000532 ORTHO05D002745 9.9e-08 60.8 36 66.7
TAR626G0270 Trochodendron aralioides HOM05D000532 ORTHO05D002745 1.7e-07 60.1 41 61.0
ECA246G1845 Erigeron canadensis HOM05D000532 ORTHO05D002745 3.8e-07 58.9 43 53.5
Nn8g40973 Nelumbo nucifera HOM05D000532 ORTHO05D002745 8.4e-07 57.8 44 54.5
TAR636G0955 Trochodendron aralioides HOM05D000532 ORTHO05D002745 8.4e-07 57.8 47 57.4
MBI16_g18215_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002745 3.2e-06 55.8 44 54.5
HanXRQChr04g0094111 Helianthus annuus HOM05D000532 ORTHO05D002745 7.1e-06 54.7 39 56.4


User provided reference genes

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