Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10929 Utricularia gibba HOM05D003627 ORTHO05D004307 6.2e-64 247.3 124 100.0
unitig_748.g8200 Utricularia gibba HOM05D003627 ORTHO05D004307 8.4e-61 236.9 124 95.2
Migut.A00309 Erythranthe guttata HOM05D003627 ORTHO05D004307 2.5e-52 208.8 124 80.6
MSTRG.11762 Avicennia marina HOM05D003627 ORTHO05D004307 4.3e-49 198.0 124 75.8
Oeu045199.1 Olea europaea HOM05D003627 ORTHO05D004307 3.7e-48 194.9 124 72.6
Solyc08g067020.4 Solanum lycopersicum HOM05D003627 ORTHO05D004307 6.3e-48 194.1 124 75.0
Sopen08g020960 Solanum pennellii HOM05D003627 ORTHO05D004307 6.3e-48 194.1 124 75.0
CAN.G98.17 Capsicum annuum HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 75.0
Os07g0205000 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 1.8e-47 192.6 124 77.4
Oeu031576.1 Olea europaea HOM05D003627 ORTHO05D004307 2.4e-47 192.2 124 72.6
Peaxi162Scf00341g00821 Petunia axillaris HOM05D003627 ORTHO05D004307 2.4e-47 192.2 124 74.2
Migut.E01481 Erythranthe guttata HOM05D003627 ORTHO05D004307 3.1e-47 191.8 124 74.2
PGSC0003DMG400029087 Solanum tuberosum HOM05D003627 ORTHO05D004307 5.3e-47 191.0 124 74.2
Zm00001eb094460 Zea mays HOM05D003627 ORTHO05D004307 6.9e-47 190.7 119 78.2
BcaC03g17902 Brassica carinata HOM05D003627 ORTHO05D004307 9.0e-47 190.3 124 76.6
A02p39740 Brassica napus HOM05D003627 ORTHO05D004307 9.0e-47 190.3 124 76.6
C02p59530 Brassica napus HOM05D003627 ORTHO05D004307 9.0e-47 190.3 124 76.6
Lj7A717G55 Lonicera japonica HOM05D003627 ORTHO05D004307 9.0e-47 190.3 124 72.6
Hma1.2p1_0000F.1_g000840 Hydrangea macrophylla HOM05D003627 ORTHO05D004307 2.0e-46 189.1 124 74.2
Nitab4.5_0006827g0010 Nicotiana tabacum HOM05D003627 ORTHO05D004307 2.6e-46 188.7 124 72.6
Actinidia15690 Actinidia chinensis HOM05D003627 ORTHO05D004307 5.9e-46 187.6 124 73.4
MSTRG.13989 Avicennia marina HOM05D003627 ORTHO05D004307 5.9e-46 187.6 124 71.0
Cc11_g01730 Coffea canephora HOM05D003627 ORTHO05D004307 5.9e-46 187.6 121 75.2
SGA_v2.0_scaffold169G38619 Striga asiatica HOM05D003627 ORTHO05D004307 5.9e-46 187.6 144 66.0
Carub.0006s2330 Capsella rubella HOM05D003627 ORTHO05D004307 1.7e-45 186.0 115 77.4
Dinv11613 Davidia involucrata HOM05D003627 ORTHO05D004307 1.7e-45 186.0 124 71.8
GSVIVG01035802001 Vitis vinifera HOM05D003627 ORTHO05D004307 2.9e-45 185.3 121 74.4
Thhalv10005137m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 3.8e-45 184.9 118 73.7
MBI01_g13086_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 3.8e-45 184.9 124 73.4
AL6G37230 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 5.0e-45 184.5 116 76.7
CSS0039202 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 5.0e-45 184.5 124 71.0
THA.LOC104803827 Tarenaya hassleriana HOM05D003627 ORTHO05D004307 5.0e-45 184.5 115 76.5
Lsat_1_v5_gn_5_31481 Lactuca sativa HOM05D003627 ORTHO05D004307 6.5e-45 184.1 124 71.8
CDE10G0654 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 8.5e-45 183.7 124 75.0
AT5G25450 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 1.1e-44 183.3 116 76.7
COL.COLO4_23986 Corchorus olitorius HOM05D003627 ORTHO05D004307 1.4e-44 183.0 118 72.9
Zm00001eb212550 Zea mays HOM05D003627 ORTHO05D004307 1.4e-44 183.0 124 73.4
Potri.018G031400 Populus trichocarpa HOM05D003627 ORTHO05D004307 1.9e-44 182.6 116 75.9
HPP92_001612 Vanilla planifolia HOM05D003627 ORTHO05D004307 1.9e-44 182.6 121 73.6
ATR0737G081 Amborella trichopoda HOM05D003627 ORTHO05D004307 2.5e-44 182.2 124 71.8
FAN20G0596 Fragaria x ananassa HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.0
FAN27G2400 Fragaria x ananassa HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.0
CDE10G0960 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 5.5e-44 181.0 124 74.2
Potri.006G250000 Populus trichocarpa HOM05D003627 ORTHO05D004307 7.2e-44 180.6 116 73.3
FvH4_2g29690 Fragaria vesca HOM05D003627 ORTHO05D004307 9.4e-44 180.3 116 75.9
FAN15G2106 Fragaria x ananassa HOM05D003627 ORTHO05D004307 9.4e-44 180.3 116 75.9
FAN24G2732 Fragaria x ananassa HOM05D003627 ORTHO05D004307 9.4e-44 180.3 116 75.9
CSS0004095 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 1.2e-43 179.9 124 70.2
TPR.G15658 Trifolium pratense HOM05D003627 ORTHO05D004307 1.2e-43 179.9 116 76.7
Manes.16G119000 Manihot esculenta HOM05D003627 ORTHO05D004307 1.6e-43 179.5 115 74.8
RcHm_v2.0_Chr6g0298671 Rosa chinensis HOM05D003627 ORTHO05D004307 1.6e-43 179.5 115 75.7
Zm00001eb061560 Zea mays HOM05D003627 ORTHO05D004307 2.7e-43 178.7 124 71.0
Sabra18G0032500 Salix brachista HOM05D003627 ORTHO05D004307 3.6e-43 178.3 115 74.8
HPP92_000819 Vanilla planifolia HOM05D003627 ORTHO05D004307 3.6e-43 178.3 117 73.5
Atru.chr7.2370 Acer truncatum HOM05D003627 ORTHO05D004307 4.6e-43 177.9 115 74.8
Thecc.09G148600 Theobroma cacao HOM05D003627 ORTHO05D004307 4.6e-43 177.9 115 74.8
CARHR115730 Cardamine hirsuta HOM05D003627 ORTHO05D004307 6.1e-43 177.6 118 73.7
Ca_12928_v3 Cicer arietinum L. HOM05D003627 ORTHO05D004307 6.1e-43 177.6 116 75.0
ClCG05G017090 Citrullus lanatus HOM05D003627 ORTHO05D004307 6.1e-43 177.6 116 72.4
MD08G1143000 Malus domestica HOM05D003627 ORTHO05D004307 6.1e-43 177.6 121 74.4
Medtr1g011880 Medicago truncatula HOM05D003627 ORTHO05D004307 6.1e-43 177.6 116 75.9
MD15G1119900 Malus domestica HOM05D003627 ORTHO05D004307 7.9e-43 177.2 121 74.4
Manes.03G017600 Manihot esculenta HOM05D003627 ORTHO05D004307 7.9e-43 177.2 115 73.0
Nn2g11929 Nelumbo nucifera HOM05D003627 ORTHO05D004307 7.9e-43 177.2 124 68.5
Prupe.1G472700 Prunus persica HOM05D003627 ORTHO05D004307 7.9e-43 177.2 116 75.9
TAR626G0665 Trochodendron aralioides HOM05D003627 ORTHO05D004307 1.0e-42 176.8 124 70.2
Thhalv10023759m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 1.4e-42 176.4 118 72.9
Aqoxy7G02033 Aquilegia oxysepala HOM05D003627 ORTHO05D004307 1.8e-42 176.0 116 70.7
AT4G32470 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 1.8e-42 176.0 121 72.7
A08p18170 Brassica napus HOM05D003627 ORTHO05D004307 1.8e-42 176.0 118 74.6
C03p87330 Brassica napus HOM05D003627 ORTHO05D004307 1.8e-42 176.0 115 75.7
BraA08t33770Z Brassica rapa HOM05D003627 ORTHO05D004307 1.8e-42 176.0 118 74.6
Carub.0007s0811 Capsella rubella HOM05D003627 ORTHO05D004307 1.8e-42 176.0 121 72.7
MELO3C003682.2 Cucumis melo HOM05D003627 ORTHO05D004307 1.8e-42 176.0 121 70.2
Gohir.A13G206900 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.8e-42 176.0 116 73.3
Gohir.D13G211500 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.8e-42 176.0 116 73.3
Gorai.013G241600 Gossypium raimondii HOM05D003627 ORTHO05D004307 1.8e-42 176.0 116 73.3
Lj1g0024003 Lotus japonicus HOM05D003627 ORTHO05D004307 1.8e-42 176.0 115 73.9
CiPaw.08G013800 Carya illinoinensis HOM05D003627 ORTHO05D004307 2.3e-42 175.6 116 72.4
Sed0001403 Sechium edule HOM05D003627 ORTHO05D004307 2.3e-42 175.6 115 73.9
BcaC01g01021 Brassica carinata HOM05D003627 ORTHO05D004307 3.0e-42 175.3 115 75.7
BcaC09g52038 Brassica carinata HOM05D003627 ORTHO05D004307 3.0e-42 175.3 115 75.7
BolC3t21033H Brassica oleracea HOM05D003627 ORTHO05D004307 3.0e-42 175.3 115 75.7
Os03g0806900 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 3.9e-42 174.9 119 71.4
BcaB03g12747 Brassica carinata HOM05D003627 ORTHO05D004307 5.1e-42 174.5 115 75.7
Sp7g30260 Schrenkiella parvula HOM05D003627 ORTHO05D004307 5.1e-42 174.5 115 73.0
CANSAT78G1909 Cannabis sativa HOM05D003627 ORTHO05D004307 6.7e-42 174.1 116 72.4
CARHR240390 Cardamine hirsuta HOM05D003627 ORTHO05D004307 6.7e-42 174.1 115 73.9
Cpa.g.sc1755.1 Carica papaya HOM05D003627 ORTHO05D004307 6.7e-42 174.1 115 73.9
Duzib168G1482 Durio zibethinus HOM05D003627 ORTHO05D004307 6.7e-42 174.1 115 72.2
Sp4g05010 Schrenkiella parvula HOM05D003627 ORTHO05D004307 6.7e-42 174.1 118 72.0
Duzib150G1042 Durio zibethinus HOM05D003627 ORTHO05D004307 8.8e-42 173.7 115 71.3
Phvul.001G121500 Phaseolus vulgaris HOM05D003627 ORTHO05D004307 8.8e-42 173.7 118 71.2
Cfa013184 Carpinus fangiana HOM05D003627 ORTHO05D004307 1.1e-41 173.3 115 73.0
Eucgr.C02813 Eucalyptus grandis HOM05D003627 ORTHO05D004307 1.1e-41 173.3 115 73.0
CsaV3_3G046570 Cucumis sativus L. HOM05D003627 ORTHO05D004307 1.5e-41 172.9 121 68.6
Eucgr.C01792 Eucalyptus grandis HOM05D003627 ORTHO05D004307 1.5e-41 172.9 116 70.7
Lalb_Chr08g0243901 Lupinus albus HOM05D003627 ORTHO05D004307 1.5e-41 172.9 115 72.2
PSO170G3425 Papaver somniferum HOM05D003627 ORTHO05D004307 1.5e-41 172.9 124 70.2
PSO455G0147 Papaver somniferum HOM05D003627 ORTHO05D004307 1.5e-41 172.9 124 70.2
C01p06520 Brassica napus HOM05D003627 ORTHO05D004307 2.0e-41 172.6 116 74.1
BolC1t00646H Brassica oleracea HOM05D003627 ORTHO05D004307 2.0e-41 172.6 116 74.1
Peaxi162Scf00361g00612 Petunia axillaris HOM05D003627 ORTHO05D004307 2.0e-41 172.6 124 69.4
Psat6g030080 Pisum sativum HOM05D003627 ORTHO05D004307 2.0e-41 172.6 116 72.4
PGR044G1161 Punica granatum HOM05D003627 ORTHO05D004307 2.0e-41 172.6 121 69.4
PGR044G1771 Punica granatum HOM05D003627 ORTHO05D004307 2.0e-41 172.6 121 70.2
Sed0003789 Sechium edule HOM05D003627 ORTHO05D004307 2.5e-41 172.2 122 69.7
Thhalv10026575m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 3.3e-41 171.8 115 73.0
CiPaw.07G220400 Carya illinoinensis HOM05D003627 ORTHO05D004307 5.7e-41 171.0 115 71.3
Duzib187G0128 Durio zibethinus HOM05D003627 ORTHO05D004307 5.7e-41 171.0 115 72.2
A01p05900 Brassica napus HOM05D003627 ORTHO05D004307 7.4e-41 170.6 116 73.3
ECA236G1938 Erigeron canadensis HOM05D003627 ORTHO05D004307 9.7e-41 170.2 118 72.0
Gohir.A02G112400 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.3e-40 169.9 115 70.4
BraA01t00557Z Brassica rapa HOM05D003627 ORTHO05D004307 1.7e-40 169.5 116 72.4
AUR62024869 Chenopodium quinoa HOM05D003627 ORTHO05D004307 1.7e-40 169.5 124 70.2
HanXRQChr05g0142301 Helianthus annuus HOM05D003627 ORTHO05D004307 2.8e-40 168.7 118 70.3
Lsat_1_v5_gn_8_57600 Lactuca sativa HOM05D003627 ORTHO05D004307 2.8e-40 168.7 121 69.4
Lalb_Chr23g0268801 Lupinus albus HOM05D003627 ORTHO05D004307 2.8e-40 168.7 115 69.6
ECA240G2460 Erigeron canadensis HOM05D003627 ORTHO05D004307 4.8e-40 167.9 118 70.3
Glyma.17G208000 Glycine max HOM05D003627 ORTHO05D004307 8.2e-40 167.2 115 70.4
VMungo0647G0605 Vigna mungo HOM05D003627 ORTHO05D004307 8.2e-40 167.2 115 71.3
AL7G19340 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 2.4e-39 165.6 137 64.2
Lsat_1_v5_gn_7_42641 Lactuca sativa HOM05D003627 ORTHO05D004307 4.1e-39 164.9 116 69.8
HanXRQChr03g0062131 Helianthus annuus HOM05D003627 ORTHO05D004307 5.3e-39 164.5 116 69.8
HanXRQChr06g0179891 Helianthus annuus HOM05D003627 ORTHO05D004307 6.9e-39 164.1 118 68.6
SGA_v2.0_scaffold22G09938 Striga asiatica HOM05D003627 ORTHO05D004307 2.0e-38 162.5 124 66.1
SGA_v2.0_scaffold18G08283 Striga asiatica HOM05D003627 ORTHO05D004307 5.9e-38 161.0 196 45.9
DCAR_003029 Daucus carota HOM05D003627 ORTHO05D004307 7.7e-38 160.6 137 60.6
TAR636G0318 Trochodendron aralioides HOM05D003627 ORTHO05D004307 1.1e-36 156.8 115 66.1
Glyma.14G126300 Glycine max HOM05D003627 ORTHO05D004307 1.4e-36 156.4 107 70.1
arahy.Tifrunner.gnm1.ann1.J127JW Arachis hypogaea HOM05D003627 ORTHO05D004307 2.5e-36 155.6 160 53.1
TWI32G0136 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 4.2e-36 154.8 116 69.0
BraA02t08939Z Brassica rapa HOM05D003627 ORTHO05D004307 5.5e-36 154.5 106 72.6
BolC2t12016H Brassica oleracea HOM05D003627 ORTHO05D004307 2.1e-35 152.5 106 71.7
TWI34G0954 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 3.6e-35 151.8 116 67.2
SalBow4G0188 Salvia bowleyana HOM05D003627 ORTHO05D004307 1.0e-34 150.2 98 71.4
Actinidia14624 Actinidia chinensis HOM05D003627 ORTHO05D004307 8.8e-34 147.1 99 69.7
SEGI_30503 Sequoiadendron giganteum HOM05D003627 ORTHO05D004307 8.8e-34 147.1 104 69.2
Sc09g0008620 Simmondsia chinensis HOM05D003627 ORTHO05D004307 8.8e-34 147.1 94 75.5
Nn8g39358 Nelumbo nucifera HOM05D003627 ORTHO05D004307 2.0e-33 146.0 110 65.5
Dinv30181 Davidia involucrata HOM05D003627 ORTHO05D004307 4.4e-33 144.8 101 67.3
QL02p023157 Quercus lobata HOM05D003627 ORTHO05D004307 4.4e-33 144.8 99 70.7
Hund03017 Selenicereus undatus HOM05D003627 ORTHO05D004307 4.4e-33 144.8 98 69.4
Sc06g0000590 Simmondsia chinensis HOM05D003627 ORTHO05D004307 2.2e-32 142.5 108 64.8
Actinidia13260 Actinidia chinensis HOM05D003627 ORTHO05D004307 4.8e-32 141.4 101 66.3
Sabra06G0195600 Salix brachista HOM05D003627 ORTHO05D004307 6.3e-32 141.0 95 70.5
Aa31LG2G19380 Aethionema arabicum HOM05D003627 ORTHO05D004307 2.4e-31 139.0 99 68.7
TAR625G0096 Trochodendron aralioides HOM05D003627 ORTHO05D004307 2.4e-31 139.0 93 69.9
Ciclev10009887m.g Citrus clementina HOM05D003627 ORTHO05D004307 7.0e-31 137.5 94 69.1
Ah.10g026040 Amaranthus hybridus HOM05D003627 ORTHO05D004307 1.3e-29 133.3 219 39.3
Gorai.013G110700 Gossypium raimondii HOM05D003627 ORTHO05D004307 1.3e-29 133.3 93 67.7
arahy.Tifrunner.gnm1.ann1.8QVL0P Arachis hypogaea HOM05D003627 ORTHO05D004307 3.8e-29 131.7 162 46.9
Oeu030075.1 Olea europaea HOM05D003627 ORTHO05D004307 3.8e-29 131.7 85 70.6
QL02p087302 Quercus lobata HOM05D003627 ORTHO05D004307 5.0e-29 131.3 94 66.0
AagrBONN_evm.TU.Sc2ySwM_344.1095 Anthoceros agrestis HOM05D003627 ORTHO05D004307 1.5e-28 129.8 107 60.7
Gohir.D03G071300 Gossypium hirsutum HOM05D003627 ORTHO05D004307 3.2e-28 128.6 93 65.6
Rhsim02G0194100 Rhododendron simsii HOM05D003627 ORTHO05D004307 5.5e-28 127.9 87 67.8
SalBow8G5246 Salvia bowleyana HOM05D003627 ORTHO05D004307 5.5e-28 127.9 85 69.4
SalBow8G5369 Salvia bowleyana HOM05D003627 ORTHO05D004307 5.5e-28 127.9 85 69.4
Pp3c6_18020 Physcomitrium patens HOM05D003627 ORTHO05D004307 2.7e-27 125.6 114 60.5
Pp3c25_1520 Physcomitrium patens HOM05D003627 ORTHO05D004307 4.7e-27 124.8 115 59.1
vmacro05197 Vaccinium macrocarpon HOM05D003627 ORTHO05D004307 8.0e-27 124.0 85 68.2
HanXRQChr06g0182081 Helianthus annuus HOM05D003627 ORTHO05D004307 2.3e-26 122.5 82 75.6
Mapoly0020s0108 Marchantia polymorpha HOM05D003627 ORTHO05D004307 3.0e-26 122.1 114 56.1
CBR_g8907 Chara braunii HOM05D003627 ORTHO05D004307 5.2e-26 121.3 116 55.2
Os08g0246400 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 5.7e-25 117.9 106 60.4
SMO169G0058 Selaginella moellendorffii HOM05D003627 ORTHO05D004307 5.7e-25 117.9 117 52.1
Ah.10g026070 Amaranthus hybridus HOM05D003627 ORTHO05D004307 9.7e-25 117.1 82 69.5
Gohir.1Z049369 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.3e-24 116.7 78 71.8
Pp3c10_14460 Physcomitrium patens HOM05D003627 ORTHO05D004307 1.3e-24 116.7 100 60.0
PRCOL_00006283 Prasinoderma coloniale HOM05D003627 ORTHO05D004307 3.1e-23 112.1 113 53.1
MCO05G573 Micromonas commoda HOM05D003627 ORTHO05D004307 1.2e-22 110.2 114 51.8
Haze_21577 Corylus avellana HOM05D003627 ORTHO05D004307 4.5e-22 108.2 76 67.1
Nitab4.5_0000010g0100 Nicotiana tabacum HOM05D003627 ORTHO05D004307 1.7e-21 106.3 85 62.4
Nn1g01248 Nelumbo nucifera HOM05D001793 ORTHO05D001938 3.8e-21 105.1 87 55.2
MBI04_g38347_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 1.9e-20 102.8 76 68.4
Cre06.g262700 Chlamydomonas reinhardtii HOM05D003627 ORTHO05D004307 2.5e-20 102.4 117 50.4
CAN.G536.8 Capsicum annuum HOM05D003627 ORTHO05D001832 3.1e-15 85.5 81 59.3
AUR62030679 Chenopodium quinoa HOM05D003627 ORTHO05D004307 2.7e-14 82.4 85 55.3
SGA_v2.0_scaffold399G50806 Striga asiatica HOM05D005821 ORTHO05D006649 1.0e-13 80.5 53 67.9
Ah.10g026060 Amaranthus hybridus HOM05D003627 ORTHO05D004307 1.7e-08 63.2 39 74.4
CAN.G538.10 Capsicum annuum HOM05D003627 ORTHO05D000766 2.8e-08 62.4 43 69.8
CiPaw.03G239400 Carya illinoinensis HOM05D003627 ORTHO05D004307 3.7e-08 62.0 41 61.0
DCAR_029199 Daucus carota HOM05D003627 ORTHO05D004307 6.3e-08 61.2 39 71.8
CARHR187770 Cardamine hirsuta HOM05D003627 ORTHO05D004307 1.2e-06 57.0 57 52.6
PGR044G2108 Punica granatum HOM05D007797 ORTHO05D009741 5.9e-06 54.7 77 42.9


User provided reference genes

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