Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 7.9e-98 360.5 193 100.0
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 7.8e-29 131.3 113 67.3
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.5e-27 127.1 112 65.2
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 2.8e-26 122.9 112 64.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 2.8e-26 122.9 112 64.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 2.8e-26 122.9 112 64.3
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.0e-25 120.9 121 61.2
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.8e-25 120.2 116 63.8
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 3.1e-25 119.4 94 69.1
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 6.8e-25 118.2 118 63.6
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.5e-24 114.8 121 58.7
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 9.8e-24 114.4 109 60.6
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.3e-23 114.0 101 63.4
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.7e-23 113.6 111 63.1
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.7e-23 113.6 82 75.6
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.7e-23 113.6 82 75.6
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 1.7e-23 113.6 112 59.8
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.2e-23 113.2 115 60.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.9e-23 112.8 153 52.3
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 6.4e-23 111.7 104 63.5
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.1e-22 110.9 124 54.8
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.1e-22 110.9 106 58.5
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.1e-22 110.9 83 68.7
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.1e-22 110.9 117 59.8
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 1.4e-22 110.5 111 60.4
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 2.4e-22 109.8 117 58.1
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.4e-22 109.8 77 75.3
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 3.2e-22 109.4 95 68.4
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.1e-22 109.0 80 73.8
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 4.1e-22 109.0 80 72.5
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 5.4e-22 108.6 113 54.9
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 7.0e-22 108.2 97 63.9
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 7.0e-22 108.2 91 67.0
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 7.0e-22 108.2 85 69.4
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 9.2e-22 107.8 105 60.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.2e-21 107.5 88 65.9
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.2e-21 107.5 85 71.8
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.2e-21 107.5 81 74.1
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.2e-21 107.5 106 59.4
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.6e-21 107.1 105 59.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 2.0e-21 106.7 125 49.6
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 2.7e-21 106.3 149 49.7
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 2.7e-21 106.3 108 63.9
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.5e-21 105.9 80 71.2
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 3.5e-21 105.9 151 47.7
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 4.6e-21 105.5 105 60.0
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 4.6e-21 105.5 114 57.0
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 4.6e-21 105.5 115 53.9
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 4.6e-21 105.5 97 59.8
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 4.6e-21 105.5 80 71.2
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 6.0e-21 105.1 121 56.2
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 7.8e-21 104.8 120 54.2
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.0e-20 104.4 126 51.6
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.0e-20 104.4 84 67.9
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.3e-20 104.0 115 53.0
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 1.3e-20 104.0 120 55.8
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.7e-20 103.6 83 67.5
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 3.0e-20 102.8 127 52.8
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 3.0e-20 102.8 115 52.2
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 3.0e-20 102.8 110 56.4
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 5.0e-20 102.1 126 51.6
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 5.0e-20 102.1 127 52.8
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 5.0e-20 102.1 136 46.3
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 5.0e-20 102.1 104 58.7
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 6.6e-20 101.7 114 56.1
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 6.6e-20 101.7 106 56.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.6e-20 101.7 83 69.9
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 8.6e-20 101.3 127 52.8
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 8.6e-20 101.3 127 52.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 8.6e-20 101.3 122 49.2
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.1e-19 100.9 118 55.9
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.5e-19 100.5 114 55.3
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.9e-19 100.1 92 60.9
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 2.5e-19 99.8 127 50.4
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.3e-19 99.4 115 49.6
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 4.3e-19 99.0 130 49.2
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 4.3e-19 99.0 125 50.4
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 5.6e-19 98.6 115 49.6
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 9.5e-19 97.8 83 65.1
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.2e-18 97.4 83 63.9
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.2e-18 97.4 130 48.5
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.6e-18 97.1 126 50.8
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.6e-18 97.1 84 65.5
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 2.1e-18 96.7 59 79.7
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 2.1e-18 96.7 67 76.1
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 3.6e-18 95.9 115 50.4
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 4.7e-18 95.5 130 50.0
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 3.1e-17 92.8 108 50.9
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 6.8e-17 91.7 99 58.6
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 8.9e-17 91.3 61 75.4
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 8.9e-17 91.3 68 72.1
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 3.4e-16 89.4 65 72.3
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 3.7e-15 85.9 126 46.8
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.4e-14 84.0 61 67.2
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.9e-14 83.6 78 59.0
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 7.1e-14 81.6 55 72.7
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.7e-12 77.0 112 43.8
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 3.0e-12 76.3 55 69.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 3.9e-12 75.9 53 71.7
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.5e-11 73.9 148 38.5
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 5.6e-11 72.0 95 47.4
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 2.3e-09 66.6 182 34.6
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.0e-09 65.9 72 51.4
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 4.0e-09 65.9 138 38.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 4.4e-08 62.4 114 35.1


User provided reference genes

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