Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.7e-68 261.9 138 100.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 2.2e-46 189.1 117 82.1
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.1e-45 186.8 116 81.0
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.5e-45 186.4 116 81.0
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 2.5e-45 185.7 114 82.5
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 9.4e-45 183.7 129 74.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 4.7e-44 181.4 127 75.6
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 4.7e-44 181.4 117 82.9
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 6.1e-44 181.0 115 78.3
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 6.1e-44 181.0 117 77.8
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 8.0e-44 180.6 112 79.5
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 1.0e-43 180.3 116 76.7
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.8e-43 179.5 118 78.0
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 1.8e-43 179.5 126 74.6
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 2.3e-43 179.1 115 80.0
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 3.0e-43 178.7 115 78.3
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.2e-43 177.9 111 79.3
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 6.8e-43 177.6 127 70.9
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 6.8e-43 177.6 129 73.6
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 8.8e-43 177.2 139 70.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 8.8e-43 177.2 114 78.9
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 1.5e-42 176.4 115 78.3
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 2.6e-42 175.6 113 79.6
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 3.4e-42 175.3 117 80.3
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.4e-42 174.9 111 79.3
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 5.7e-42 174.5 113 77.9
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 5.7e-42 174.5 117 77.8
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 5.7e-42 174.5 134 67.9
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 5.7e-42 174.5 113 77.0
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 5.7e-42 174.5 111 81.1
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 5.7e-42 174.5 111 81.1
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 7.5e-42 174.1 115 79.1
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 7.5e-42 174.1 107 79.4
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 9.8e-42 173.7 109 79.8
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.3e-41 173.3 115 75.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.3e-41 173.3 114 78.9
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 2.2e-41 172.6 114 77.2
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 2.8e-41 172.2 114 78.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 3.7e-41 171.8 114 77.2
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 3.7e-41 171.8 112 77.7
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.8e-41 171.4 113 77.0
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.8e-41 171.4 113 77.0
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 4.8e-41 171.4 111 81.1
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 6.3e-41 171.0 113 77.0
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.3e-41 171.0 113 77.0
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.3e-41 171.0 113 77.0
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.3e-41 171.0 113 77.0
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.3e-41 171.0 112 76.8
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 6.3e-41 171.0 114 77.2
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 6.3e-41 171.0 126 73.0
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 8.3e-41 170.6 114 76.3
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.1e-40 170.2 116 77.6
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.4e-40 169.9 123 74.0
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.4e-40 169.9 113 76.1
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.4e-40 169.9 127 72.4
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.8e-40 169.5 113 77.0
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.8e-40 169.5 109 78.0
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.8e-40 169.5 142 66.9
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.4e-40 169.1 112 80.4
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.4e-40 169.1 114 78.1
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 3.1e-40 168.7 109 78.0
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 3.1e-40 168.7 111 77.5
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 3.1e-40 168.7 113 71.7
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 4.1e-40 168.3 111 80.2
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 4.1e-40 168.3 127 72.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 7.0e-40 167.5 110 76.4
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 7.0e-40 167.5 110 76.4
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 7.0e-40 167.5 110 76.4
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 7.0e-40 167.5 110 76.4
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 7.0e-40 167.5 111 76.6
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 7.0e-40 167.5 114 77.2
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 9.1e-40 167.2 120 73.3
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.1e-40 167.2 120 73.3
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.2e-39 166.8 114 76.3
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.6e-39 166.4 110 76.4
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 2.0e-39 166.0 117 75.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 2.7e-39 165.6 114 74.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 3.5e-39 165.2 114 74.6
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 3.5e-39 165.2 114 74.6
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-39 165.2 142 63.4
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 4.5e-39 164.9 111 75.7
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 5.9e-39 164.5 117 76.1
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 5.9e-39 164.5 114 75.4
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 5.9e-39 164.5 146 61.0
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 7.7e-39 164.1 109 76.1
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.7e-39 164.1 125 70.4
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 7.7e-39 164.1 116 74.1
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 2.2e-38 162.5 114 72.8
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.9e-38 162.2 114 74.6
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 3.8e-38 161.8 123 69.1
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 5.0e-38 161.4 107 74.8
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 5.0e-38 161.4 127 69.3
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 6.5e-38 161.0 107 74.8
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.5e-38 160.6 112 74.1
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 1.5e-37 159.8 125 66.4
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 3.2e-37 158.7 110 73.6
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.5e-37 157.9 98 79.6
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.2e-36 156.8 123 68.3
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 2.1e-36 156.0 111 75.7
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 2.1e-36 156.0 111 75.7
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 2.7e-36 155.6 107 73.8
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.7e-36 155.6 110 72.7
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.7e-36 154.8 111 70.3
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 1.0e-35 153.7 114 73.7
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.4e-35 153.3 134 63.4
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 1.8e-35 152.9 127 67.7
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.0e-35 151.8 111 70.3
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 4.0e-35 151.8 92 79.3
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 1.2e-34 150.2 115 70.4
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.5e-34 149.8 111 72.1
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.5e-34 149.8 127 66.1
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 9.8e-34 147.1 131 60.3
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 9.8e-34 147.1 114 67.5
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.7e-33 146.4 116 66.4
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 2.2e-33 146.0 115 67.8
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.8e-33 145.6 129 62.8
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 3.7e-33 145.2 110 65.5
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.3e-33 144.4 116 65.5
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.4e-32 142.5 127 60.6
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 3.1e-32 142.1 99 72.7
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 3.1e-32 142.1 134 61.2
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 3.5e-31 138.7 102 67.6
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 1.1e-29 133.7 93 71.0
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.3e-29 132.1 108 62.0
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 1.0e-27 127.1 110 62.7
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 9.2e-24 114.0 99 61.6
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 2.7e-23 112.5 92 59.8
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.5e-23 112.1 93 61.3
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.9e-21 106.3 128 51.6
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 7.3e-21 104.4 114 51.8
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-20 103.6 57 86.0
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.0e-19 100.5 106 50.9
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 3.1e-19 99.0 126 46.8
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.5e-13 79.3 76 53.9
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 7.3e-13 77.8 105 44.8
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 3.6e-12 75.5 124 41.1
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.1e-12 74.3 93 48.4
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 8.3e-09 64.3 52 65.4
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 3.5e-07 58.9 93 34.4


User provided reference genes

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