Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_29.g31882 Utricularia gibba HOM05D005814 ORTHO05D006821 8.2e-208 726.9 381 100.0
unitig_27.g25164 Utricularia gibba HOM05D005814 ORTHO05D006821 4.1e-167 591.7 524 68.1
Migut.E00496 Erythranthe guttata HOM05D005814 ORTHO05D006821 1.4e-53 214.5 383 40.2
SalBow2G2494 Salvia bowleyana HOM05D005814 ORTHO05D006821 1.8e-45 187.6 385 37.7
Cc11_g06580 Coffea canephora HOM05D005814 ORTHO05D006821 1.9e-42 177.6 335 39.1
CSS0022543 Camellia sinensis var. sinensis HOM05D005814 ORTHO05D006821 1.7e-40 171.0 337 39.8
Lj6A734T81 Lonicera japonica HOM05D005814 ORTHO05D006821 3.9e-40 169.9 380 36.6
Dinv26373 Davidia involucrata HOM05D005814 ORTHO05D006821 2.5e-39 167.2 383 36.0
SGA_v2.0_scaffold23G10169 Striga asiatica HOM05D005814 ORTHO05D006821 7.3e-39 165.6 385 34.8
Nitab4.5_0007364g0010 Nicotiana tabacum HOM05D005814 ORTHO05D006821 2.4e-37 160.6 343 38.8
Actinidia22431 Actinidia chinensis HOM05D005814 ORTHO05D006821 1.3e-35 154.8 342 37.7
Solyc04g008070.3 Solanum lycopersicum HOM05D005814 ORTHO05D006821 2.9e-35 153.7 389 35.5
Hma1.2p1_0234F.1_g098410 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 8.4e-35 152.1 424 31.8
Oeu006299.1 Olea europaea HOM05D005814 ORTHO05D006821 8.4e-35 152.1 426 34.0
PGSC0003DMG400029513 Solanum tuberosum HOM05D005814 ORTHO05D006821 1.1e-34 151.8 403 34.2
DCAR_023563 Daucus carota HOM05D005814 ORTHO05D006821 2.4e-34 150.6 347 34.6
Sopen04g003220 Solanum pennellii HOM05D005814 ORTHO05D006821 1.2e-33 148.3 387 35.1
CAN.G74.21 Capsicum annuum HOM05D005814 ORTHO05D006821 2.3e-32 144.1 334 36.8
Peaxi162Scf00337g00625 Petunia axillaris HOM05D005814 ORTHO05D006821 3.0e-32 143.7 306 37.3
Nn4g24463 Nelumbo nucifera HOM05D005814 ORTHO05D006821 3.9e-32 143.3 305 35.7
Nitab4.5_0012105g0040 Nicotiana tabacum HOM05D005814 ORTHO05D006821 1.9e-31 141.0 340 36.2
TAR629G0065 Trochodendron aralioides HOM05D005814 ORTHO05D006821 5.3e-29 132.9 339 33.6
GSVIVG01011625001 Vitis vinifera HOM05D005814 ORTHO05D006821 9.9e-28 128.6 372 34.1
AUR62000804 Chenopodium quinoa HOM05D005814 ORTHO05D006821 4.9e-27 126.3 241 43.2
Glyma.02G086500 Glycine max HOM05D005814 ORTHO05D006821 3.2e-26 123.6 359 33.4
Cpa.g.sc2.165 Carica papaya HOM05D005814 ORTHO05D006821 4.2e-26 123.2 378 30.4
Lsat_1_v5_gn_4_23401 Lactuca sativa HOM05D005814 ORTHO05D006821 7.1e-26 122.5 394 28.9
MELO3C016674.2 Cucumis melo HOM05D005814 ORTHO05D006821 3.5e-25 120.2 342 31.0
Ciclev10017889m.g Citrus clementina HOM05D005814 ORTHO05D006821 7.9e-25 119.0 367 31.6
ECA234G1246 Erigeron canadensis HOM05D005814 ORTHO05D006821 1.8e-24 117.9 376 30.6
A08p31820 Brassica napus HOM05D005814 ORTHO05D006821 3.0e-24 117.1 391 31.5
BraA08t35104Z Brassica rapa HOM05D005814 ORTHO05D006821 3.0e-24 117.1 391 31.5
Manes.17G085800 Manihot esculenta HOM05D005814 ORTHO05D006821 3.9e-24 116.7 445 30.1
Gohir.A12G154700 Gossypium hirsutum HOM05D005814 ORTHO05D006821 5.1e-24 116.3 339 31.0
Gorai.008G170700 Gossypium raimondii HOM05D005814 ORTHO05D006821 6.7e-24 115.9 337 31.2
CsaV3_5G014510 Cucumis sativus L. HOM05D005814 ORTHO05D006821 3.3e-23 113.6 354 31.1
Gohir.D12G157900 Gossypium hirsutum HOM05D005814 ORTHO05D006821 4.3e-23 113.2 389 29.3
Medtr1g032850 Medicago truncatula HOM05D005814 ORTHO05D006821 5.6e-23 112.8 335 30.7
CDE11G1165 Ceratophyllum demersum HOM05D055633 ORTHO05D006821 7.4e-23 112.5 229 38.0
AUR62005164 Chenopodium quinoa HOM05D005814 ORTHO05D006821 7.4e-23 112.5 278 37.1
Potri.010G103800 Populus trichocarpa HOM05D005814 ORTHO05D006821 7.4e-23 112.5 370 31.9
Cfa015048 Carpinus fangiana HOM05D005814 ORTHO05D006821 1.6e-22 111.3 347 31.7
CiPaw.06G055200 Carya illinoinensis HOM05D005814 ORTHO05D006821 1.6e-22 111.3 395 31.1
Prupe.1G335600 Prunus persica HOM05D005814 ORTHO05D006821 2.1e-22 110.9 370 31.4
BcaB02g06546 Brassica carinata HOM05D005814 ORTHO05D006821 2.8e-22 110.5 391 31.2
C08p16910 Brassica napus HOM05D005814 ORTHO05D006821 3.7e-22 110.2 391 30.4
BolC8t49318H Brassica oleracea HOM05D005814 ORTHO05D006821 3.7e-22 110.2 391 30.4
Nitab4.5_0003884g0090 Nicotiana tabacum HOM05D005814 ORTHO05D006821 6.2e-22 109.4 331 33.5
BcaC07g38760 Brassica carinata HOM05D005814 ORTHO05D006821 1.1e-21 108.6 390 30.3
Phvul.003G016100 Phaseolus vulgaris HOM05D005814 ORTHO05D006821 1.1e-21 108.6 393 30.0
Dinv26379 Davidia involucrata HOM05D005814 ORTHO05D006821 1.8e-21 107.8 75 73.3
MD13G1018000 Malus domestica HOM05D005814 ORTHO05D006821 5.3e-21 106.3 320 31.9
Ca_13003_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 9.0e-21 105.5 365 29.3
Sed0025695 Sechium edule HOM05D005814 ORTHO05D006821 1.5e-20 104.8 355 29.9
Aa31LG1G340 Aethionema arabicum HOM05D005814 ORTHO05D006821 2.6e-20 104.0 336 31.8
Hma1.2p1_1845F.1_g305150 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 2.6e-20 104.0 72 70.8
Sc16g0008510 Simmondsia chinensis HOM05D005814 ORTHO05D006821 4.5e-20 103.2 457 30.9
THA.LOC104805940 Tarenaya hassleriana HOM05D005814 ORTHO05D006821 5.8e-20 102.8 310 33.2
RcHm_v2.0_Chr4g0442421 Rosa chinensis HOM05D005814 ORTHO05D006821 7.6e-20 102.4 364 31.6
VMungo1215G3061 Vigna mungo HOM05D005814 ORTHO05D006821 1.0e-19 102.1 368 30.2
Aqoxy3G04061 Aquilegia oxysepala HOM05D005814 ORTHO05D006821 1.7e-19 101.3 340 30.0
Carub.0001s1454 Capsella rubella HOM05D005814 ORTHO05D006821 2.2e-19 100.9 340 29.7
Sed0028047 Sechium edule HOM05D005814 ORTHO05D006821 2.9e-19 100.5 338 29.6
FAN22G0411 Fragaria x ananassa HOM05D005814 ORTHO05D006821 8.4e-19 99.0 352 31.8
TWI74G1321 Tripterygium wilfordii HOM05D005814 ORTHO05D006821 8.4e-19 99.0 342 30.7
Lj2g0010004 Lotus japonicus HOM05D005814 ORTHO05D006821 1.1e-18 98.6 398 28.6
A06p10800 Brassica napus HOM05D005814 ORTHO05D006821 2.5e-18 97.4 401 28.9
FAN07G0145 Fragaria x ananassa HOM05D005814 ORTHO05D006821 5.5e-18 96.3 340 31.5
BolC5t30013H Brassica oleracea HOM05D005814 ORTHO05D006821 9.3e-18 95.5 365 28.5
FAN12G4059 Fragaria x ananassa HOM05D005814 ORTHO05D006821 9.3e-18 95.5 402 30.8
PSO782G2706 Papaver somniferum HOM05D005814 ORTHO05D006821 9.3e-18 95.5 337 29.1
BraA06t24258Z Brassica rapa HOM05D005814 ORTHO05D006821 1.2e-17 95.1 369 29.3
C05p12700 Brassica napus HOM05D005814 ORTHO05D006821 1.6e-17 94.7 370 28.4
FvH4_4g33270 Fragaria vesca HOM05D005814 ORTHO05D006821 1.6e-17 94.7 402 30.8
Ah.06g189510 Amaranthus hybridus HOM05D005814 ORTHO05D006821 2.1e-17 94.4 286 33.6
Psat6g051160 Pisum sativum HOM05D005814 ORTHO05D006821 2.7e-17 94.0 394 28.9
Haze_10846 Corylus avellana HOM05D005814 ORTHO05D006821 3.5e-17 93.6 335 29.6
HanXRQChr17g0566001 Helianthus annuus HOM05D005814 ORTHO05D006821 4.6e-17 93.2 356 28.7
Sp1g13190 Schrenkiella parvula HOM05D005814 ORTHO05D006821 7.9e-17 92.4 339 31.0
BcaB03g13082 Brassica carinata HOM05D005814 ORTHO05D006821 1.0e-16 92.0 390 28.2
FAN17G1112 Fragaria x ananassa HOM05D005814 ORTHO05D006821 1.3e-16 91.7 345 31.3
unitig_27.g25167 Utricularia gibba HOM05D000391 ORTHO05D000293 1.3e-16 91.7 46 100.0
Atru.chr11.819 Acer truncatum HOM05D005814 ORTHO05D006821 2.3e-16 90.9 75 64.0
Duzib251G0248 Durio zibethinus HOM05D005814 ORTHO05D006821 2.3e-16 90.9 354 30.5
PSO782G1915 Papaver somniferum HOM05D005814 ORTHO05D006821 3.0e-16 90.5 75 60.0
PGR004G2344 Punica granatum HOM05D005814 ORTHO05D006821 1.1e-15 88.6 375 27.5
BolC8t52099H Brassica oleracea HOM05D005814 ORTHO05D006821 1.9e-15 87.8 350 28.9
CARHR015280 Cardamine hirsuta HOM05D005814 ORTHO05D006821 1.9e-15 87.8 337 29.1
ClCG07G005440 Citrullus lanatus HOM05D005814 ORTHO05D006821 1.9e-15 87.8 341 28.7
Ah.04g160370 Amaranthus hybridus HOM05D005814 ORTHO05D006821 2.5e-15 87.4 342 29.8
Eucgr.B02694 Eucalyptus grandis HOM05D005814 ORTHO05D006821 3.3e-15 87.0 319 28.2
BcaC07g41541 Brassica carinata HOM05D005814 ORTHO05D006821 1.3e-14 85.1 338 29.0
C08p45460 Brassica napus HOM05D005814 ORTHO05D006821 1.3e-14 85.1 338 28.7
A09p61820 Brassica napus HOM05D005814 ORTHO05D006821 2.1e-14 84.3 340 28.5
Hma1.2p1_0279F.1_g112070 Hydrangea macrophylla HOM05D005814 ORTHO05D008065 3.7e-14 83.6 59 69.5
Hma1.2p1_2790F.1_g328600 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 4.8e-14 83.2 58 70.7
Thecc.02G307500 Theobroma cacao HOM05D005814 ORTHO05D006821 8.2e-14 82.4 176 37.5
BraA09t41550Z Brassica rapa HOM05D005814 ORTHO05D006821 1.1e-13 82.0 348 28.7
HPP92_002293 Vanilla planifolia HOM05D005814 ORTHO05D006821 1.8e-13 81.3 78 51.3
Aa31LG2G8110 Aethionema arabicum HOM05D005814 ORTHO05D006821 5.3e-13 79.7 340 28.2
Atru.chr11.820 Acer truncatum HOM05D005814 ORTHO05D006821 6.9e-13 79.3 223 32.3
AT1G14750 Arabidopsis thaliana HOM05D005814 ORTHO05D006821 6.9e-13 79.3 340 28.5
Lalb_Chr10g0095591 Lupinus albus HOM05D005814 ORTHO05D006821 2.0e-12 77.8 173 38.2
Os03g0225200 Oryza sativa ssp. japonica HOM05D005814 ORTHO05D006821 2.0e-12 77.8 333 26.1
Thhalv10009486m.g Eutrema salsugineum HOM05D005814 ORTHO05D006821 3.4e-12 77.0 135 37.8
COL.COLO4_27611 Corchorus olitorius HOM05D005814 ORTHO05D006821 7.6e-12 75.9 209 36.4
TPR.G6435 Trifolium pratense HOM05D005814 ORTHO05D006821 1.0e-11 75.5 223 28.3
AL1G26770 Arabidopsis lyrata HOM05D005814 ORTHO05D006821 3.8e-11 73.6 348 28.2
Lalb_Chr10g0095581 Lupinus albus HOM05D005814 ORTHO05D006821 5.0e-11 73.2 75 52.0
SEGI_10740 Sequoiadendron giganteum HOM05D005814 ORTHO05D006821 5.0e-11 73.2 162 31.5
EL10Ac4g09401 Beta vulgaris HOM05D005814 ORTHO05D006821 6.5e-11 72.8 203 37.4
Zm00001eb009260 Zea mays HOM05D005814 ORTHO05D006821 4.2e-10 70.1 74 48.6
arahy.Tifrunner.gnm1.ann1.UBK9I9 Arachis hypogaea HOM05D005814 ORTHO05D006821 4.6e-09 66.6 214 31.8
arahy.Tifrunner.gnm1.ann1.FUL2U5 Arachis hypogaea HOM05D005814 ORTHO05D006821 6.1e-09 66.2 214 31.8
Glyma.07G172600 Glycine max HOM05D005814 ORTHO05D006821 1.0e-08 65.5 75 49.3
SHI04346 Sapria himalayana HOM05D005814 ORTHO05D006821 2.3e-08 64.3 181 32.6
Ca_13001_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 1.9e-07 61.2 120 39.2
QL03p038226 Quercus lobata HOM05D005814 ORTHO05D006821 2.2e-06 57.8 418 23.9
ATR0021G040 Amborella trichopoda HOM05D005814 ORTHO05D006821 3.7e-06 57.0 324 24.7
HanXRQChr16g0527251 Helianthus annuus HOM05D005814 ORTHO05D006821 4.8e-06 56.6 165 30.9


User provided reference genes

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