Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 7.0e-58 226.9 99 100.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 2.9e-48 194.9 100 84.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 5.0e-48 194.1 99 81.8
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 1.6e-46 189.1 99 80.8
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 2.1e-46 188.7 99 78.8
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 4.7e-46 187.6 99 78.8
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 78.8
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 79.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 79.8
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 77.8
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.0e-45 186.4 99 79.8
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.3e-45 185.3 99 78.8
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 78.8
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.0e-45 184.5 100 79.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.0e-45 184.5 100 79.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 4.0e-45 184.5 100 79.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 6.8e-45 183.7 100 79.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 74.7
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.5e-44 182.6 99 77.8
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 2.0e-44 182.2 100 78.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.6e-44 181.8 98 80.6
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 2.6e-44 181.8 100 79.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 2.6e-44 181.8 100 78.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 3.4e-44 181.4 100 79.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 4.4e-44 181.0 98 80.6
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 4.4e-44 181.0 100 78.0
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 4.4e-44 181.0 100 78.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 5.7e-44 180.6 99 75.8
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.7e-43 179.1 100 78.0
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.7e-43 177.9 99 75.8
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 77.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 77.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 77.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 4.8e-43 177.6 100 77.0
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 8.3e-43 176.8 99 75.8
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.1e-42 176.4 98 75.5
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.1e-42 176.4 100 75.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 77.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 1.4e-42 176.0 99 73.7
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 75.0
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 72.7
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 72.7
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 2.4e-42 175.3 100 76.0
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 4.1e-42 174.5 99 70.7
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 7.0e-42 173.7 98 74.5
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 75.0
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 76.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 9.1e-42 173.3 100 73.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.2e-41 172.9 100 72.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 1.2e-41 172.9 99 71.7
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 1.2e-41 172.9 99 71.7
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 72.0
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 4.5e-41 171.0 100 74.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 5.9e-41 170.6 97 71.1
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 7.7e-41 170.2 99 71.7
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.0e-40 169.9 100 72.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 1.0e-40 169.9 100 74.0
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.3e-40 169.5 99 71.7
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 1.7e-40 169.1 100 70.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.7e-40 169.1 100 72.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 3.8e-40 167.9 100 72.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 8.6e-40 166.8 100 71.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 2.5e-39 165.2 100 69.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.5e-39 165.2 100 69.0
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 4.2e-39 164.5 99 64.6
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 4.2e-39 164.5 95 74.7
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 5.5e-39 164.1 97 71.1
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 7.2e-39 163.7 100 67.0
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 9.5e-39 163.3 99 63.6
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.6e-38 162.5 100 68.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.8e-38 161.8 100 68.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 6.1e-38 160.6 100 69.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 6.1e-38 160.6 100 67.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.3e-37 158.7 98 70.4
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.0e-36 155.6 80 81.2
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.4e-36 154.8 87 74.7
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 1.3e-35 152.9 169 46.2
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.1e-34 149.8 80 77.5
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 1.4e-34 149.4 98 66.3
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 7.0e-34 147.1 134 52.2
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 4.5e-33 144.4 98 63.3
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 63.6
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 1.1e-31 139.8 110 53.6
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.5e-31 138.7 100 63.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.5e-31 138.7 100 63.0
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.0e-29 133.3 99 59.6
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.4e-26 122.9 67 77.6
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 2.0e-25 119.0 101 56.4
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 3.1e-21 105.1 101 51.5
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.7e-19 99.4 50 84.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.2e-19 99.0 102 50.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 6.6e-16 87.4 100 41.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.2e-12 76.6 37 86.5
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 2.9e-11 72.0 32 93.8
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.3e-08 62.4 39 66.7
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 1.9e-07 59.3 88 36.4


User provided reference genes

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