Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 3.4e-186 654.8 324 100.0
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.1e-99 365.9 317 58.7
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 1.5e-93 347.1 331 54.7
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 3.4e-93 345.9 372 49.5
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 6.3e-92 341.7 340 53.5
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 2.4e-91 339.7 322 55.6
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 7.0e-91 338.2 338 53.3
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 4.5e-90 335.5 286 59.1
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 5.9e-90 335.1 340 52.4
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 1.0e-89 334.3 358 52.0
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.3e-89 333.2 298 57.4
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 3.9e-89 332.4 292 57.9
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 6.6e-89 331.6 272 59.2
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.3e-88 329.3 288 56.9
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 1.6e-87 327.0 286 57.0
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 1.6e-87 327.0 318 51.9
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.1e-87 326.6 318 51.6
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 2.8e-87 326.2 273 59.7
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.1e-86 322.8 294 54.8
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 5.2e-86 322.0 337 51.0
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.2e-85 320.9 298 54.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.5e-85 320.5 293 56.3
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 2.0e-85 320.1 287 55.7
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 5.8e-85 318.5 340 50.9
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 5.8e-85 318.5 298 53.0
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 5.8e-85 318.5 305 54.1
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 9.8e-85 317.8 291 56.4
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 9.8e-85 317.8 313 53.4
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 1.7e-84 317.0 290 55.2
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.7e-84 315.8 288 55.2
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 8.3e-84 314.7 290 54.8
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.1e-83 314.3 286 55.2
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.4e-83 313.9 340 50.3
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 1.9e-83 313.5 290 54.8
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.4e-83 313.2 287 55.7
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.4e-83 313.2 274 55.5
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 3.2e-83 312.8 290 55.9
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 4.1e-83 312.4 301 53.8
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 4.1e-83 312.4 286 55.2
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 4.1e-83 312.4 292 53.1
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 5.4e-83 312.0 288 54.2
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 9.2e-83 311.2 301 54.2
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 9.2e-83 311.2 304 54.3
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.2e-82 310.8 291 55.0
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.2e-82 310.8 291 55.0
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 1.2e-82 310.8 289 55.4
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.2e-82 310.8 287 55.7
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.6e-82 310.5 321 52.6
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 2.0e-82 310.1 331 51.7
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 2.0e-82 310.1 291 56.4
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 2.7e-82 309.7 297 53.9
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 3.5e-82 309.3 290 55.9
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 4.6e-82 308.9 291 55.0
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 4.6e-82 308.9 337 48.4
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 6.0e-82 308.5 288 54.9
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.3e-81 306.6 337 47.8
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 5.0e-81 305.4 294 54.1
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 5.0e-81 305.4 281 55.9
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.5e-80 303.9 297 54.9
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.5e-80 303.9 290 55.2
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.5e-80 303.9 283 54.8
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 2.5e-80 303.1 316 49.7
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 3.3e-80 302.8 286 54.5
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 4.3e-80 302.4 337 47.8
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 4.3e-80 302.4 298 51.3
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.3e-80 302.4 307 51.8
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 5.6e-80 302.0 299 50.8
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 5.6e-80 302.0 285 56.5
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 2.8e-79 299.7 286 54.5
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 5.2e-78 295.4 281 54.1
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 5.2e-78 295.4 281 53.4
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 6.8e-78 295.0 281 53.7
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 1.2e-77 294.3 379 44.9
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.6e-77 293.1 299 51.8
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 5.8e-77 292.0 291 53.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 7.5e-77 291.6 287 54.4
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 9.8e-77 291.2 281 53.7
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 9.8e-77 291.2 327 47.1
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 6.4e-76 288.5 283 53.7
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 1.9e-75 287.0 293 54.6
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 3.2e-75 286.2 362 44.5
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 6.6e-73 278.5 283 50.9
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 4.9e-68 262.3 295 50.2
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.4e-67 260.8 267 52.1
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 7.8e-66 255.0 243 54.3
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.6e-63 247.3 247 49.4
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 6.2e-63 245.4 275 49.8
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.0e-61 240.4 336 41.4
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.4e-59 234.2 257 49.0
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.4e-59 233.4 298 44.0
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.0e-58 228.8 309 42.7
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 3.4e-53 213.0 199 51.8
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.1e-51 208.0 308 38.6
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.0e-49 199.9 260 40.4
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.5e-48 196.8 306 37.3
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.4e-46 191.0 307 37.1
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 3.5e-42 176.4 338 37.9
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 7.9e-42 175.3 129 63.6
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 2.6e-37 160.2 138 52.9
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 7.6e-37 158.7 233 41.6
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.9e-35 154.1 223 39.0
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 3.2e-35 153.3 119 59.7
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 3.5e-34 149.8 278 34.9
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 3.1e-30 136.7 163 42.9
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 3.9e-25 119.8 359 27.0
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 3.1e-22 110.2 144 38.2
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 1.3e-20 104.8 111 46.8
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 7.2e-19 99.0 302 28.1
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 6.3e-15 85.9 81 49.4
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 2.1e-10 70.9 99 36.4
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.1e-06 55.5 61 47.5
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.1e-06 55.5 61 47.5
SalBow8G1474 Salvia bowleyana HOM05D000221 ORTHO05D359434 9.1e-06 55.5 55 40.0


User provided reference genes

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