Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 2.7e-214 748.4 385 100.0
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.2e-102 377.5 364 54.1
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 6.6e-96 355.1 365 52.6
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 2.5e-95 353.2 363 53.4
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.2e-91 340.1 364 50.8
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 6.4e-91 338.6 364 51.4
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 4.1e-90 335.9 364 50.5
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 7.1e-90 335.1 364 49.5
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.2e-89 334.3 366 51.4
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 2.7e-89 333.2 364 49.7
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 7.8e-89 331.6 365 49.3
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 3.9e-88 329.3 363 49.6
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 5.1e-88 328.9 364 49.2
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.1e-87 327.8 338 52.7
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 2.5e-87 326.6 375 49.3
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 9.5e-87 324.7 364 48.9
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.1e-86 323.6 364 48.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.4e-85 320.9 369 48.2
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.8e-85 320.5 364 49.7
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 6.8e-85 318.5 364 48.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 2.0e-84 317.0 371 47.7
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 2.9e-83 313.2 363 46.6
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 2.9e-83 313.2 366 48.4
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 4.9e-83 312.4 364 45.6
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 8.4e-83 311.6 365 47.1
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.4e-82 310.8 371 46.9
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 3.2e-82 309.7 365 47.4
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 7.1e-82 308.5 368 46.5
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 9.2e-82 308.1 365 46.8
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.2e-81 307.8 364 46.7
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.6e-81 307.4 364 48.1
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 2.1e-81 307.0 365 47.1
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.0e-80 303.1 337 47.5
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 3.9e-80 302.8 367 45.2
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 3.9e-80 302.8 365 46.0
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.6e-78 297.4 364 45.3
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 2.1e-78 297.0 366 45.1
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 2.1e-78 297.0 366 46.2
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.6e-78 296.2 365 44.7
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 4.7e-78 295.8 369 44.4
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 8.1e-78 295.0 369 44.2
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.4e-77 294.3 364 44.8
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 4.0e-77 292.7 366 44.8
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.9e-77 292.0 364 44.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 6.9e-77 292.0 364 45.3
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 2.6e-76 290.0 365 43.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 3.4e-76 289.7 349 45.6
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 1.1e-74 284.6 365 44.4
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.1e-74 284.6 363 43.3
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.4e-74 284.3 363 45.2
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 5.4e-74 282.3 363 45.2
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 7.8e-73 278.5 368 42.7
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 3.0e-72 276.6 303 51.2
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 6.6e-72 275.4 345 45.5
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 8.7e-72 275.0 354 43.2
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.5e-71 274.2 363 43.8
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.6e-70 270.8 367 43.3
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 9.0e-69 265.0 364 42.3
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 2.0e-68 263.8 362 42.3
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.0e-68 263.8 366 42.1
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.7e-67 260.8 370 40.5
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.2e-67 260.4 366 40.7
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.5e-65 253.1 367 40.6
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 3.5e-65 253.1 366 41.0
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 5.1e-64 249.2 319 43.9
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.1e-63 248.1 261 51.7
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.3e-63 246.1 323 44.0
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 4.0e-61 239.6 369 40.4
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 9.0e-61 238.4 369 40.7
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.2e-60 238.0 366 40.2
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.5e-60 237.7 369 40.7
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.6e-60 236.9 366 40.2
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 4.5e-60 236.1 368 40.8
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 9.9e-60 235.0 366 40.4
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.2e-59 233.8 366 40.2
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 2.2e-59 233.8 366 40.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 1.1e-58 231.5 368 38.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.4e-58 231.1 248 52.0
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 7.9e-57 225.3 368 39.4
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 8.7e-56 221.9 240 49.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.5e-55 221.1 390 35.9
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 5.6e-55 219.2 370 38.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.4e-52 209.9 263 46.0
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 3.4e-52 209.9 369 36.9
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.9e-51 206.8 366 36.1
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 3.8e-51 206.5 481 31.8
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 3.1e-45 186.8 257 42.4
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.6e-44 183.7 235 47.7
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.9e-43 180.3 372 34.4
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.2e-38 164.1 365 31.0
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 9.1e-37 158.7 364 33.2
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.8e-35 153.3 363 30.6
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 5.0e-35 152.9 364 32.4
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 5.0e-35 152.9 364 32.4
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.0e-32 143.7 246 35.0
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.7e-30 137.9 141 50.4
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.0e-24 118.6 100 61.0
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.8e-24 117.9 118 49.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 6.7e-24 115.9 211 35.5
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.3e-23 113.6 145 43.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 7.4e-23 112.5 279 31.5
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.7e-22 110.2 347 29.1
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.2e-20 105.1 292 30.5
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 5.9e-20 102.8 117 43.6
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.5e-15 88.2 168 34.5
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 2.6e-15 87.4 122 37.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.1e-13 80.1 115 43.5
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.3e-11 75.1 205 30.2
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 5.2e-08 63.2 179 31.3


User provided reference genes

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