Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.7e-224 782.3 390 100.0
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 3.4e-156 555.4 400 70.5
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 2.2e-147 526.2 386 69.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.9e-147 525.8 393 69.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 6.0e-145 518.1 388 69.1
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 5.0e-144 515.0 422 65.2
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 2.5e-143 512.7 396 67.4
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 9.5e-143 510.8 394 68.0
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 8.1e-142 507.7 396 66.4
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.1e-141 507.3 399 67.2
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.4e-141 506.9 392 65.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 2.3e-141 506.1 354 71.8
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 3.1e-141 505.8 387 66.7
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 4.0e-141 505.4 389 67.9
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 5.2e-141 505.0 407 64.4
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 6.8e-141 504.6 389 67.9
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 8.9e-141 504.2 396 66.7
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.5e-140 503.4 364 70.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.6e-140 502.7 401 66.1
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.4e-140 502.3 394 66.2
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.2e-139 499.6 393 66.7
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.2e-139 499.6 393 65.9
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.2e-139 499.6 345 73.6
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.9e-139 499.2 297 79.8
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 4.9e-139 498.4 397 64.2
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 8.3e-139 497.7 400 66.0
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 8.3e-139 497.7 393 66.9
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.1e-138 497.3 393 66.2
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.1e-138 497.3 305 80.0
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.4e-138 496.9 344 72.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.9e-138 496.5 295 80.7
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.4e-138 496.1 393 65.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.4e-138 496.1 295 80.7
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 7.1e-138 494.6 396 64.9
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 9.2e-138 494.2 310 77.1
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 9.2e-138 494.2 304 77.3
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.2e-137 493.8 302 77.8
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.2e-137 493.8 302 77.8
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.2e-137 493.8 304 77.6
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.2e-137 493.8 395 65.3
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.7e-137 492.7 341 71.3
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.7e-137 492.7 304 77.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 3.5e-137 492.3 393 66.7
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 7.8e-137 491.1 298 79.9
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.3e-136 490.3 420 62.4
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.3e-136 490.3 305 78.4
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.7e-136 490.0 301 78.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.0e-136 489.2 397 64.7
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.0e-136 489.2 332 73.2
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.0e-136 489.2 388 67.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.0e-136 489.2 395 64.8
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.9e-136 488.8 298 78.2
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.9e-136 488.8 332 72.9
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 8.6e-136 487.6 337 73.3
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 8.6e-136 487.6 347 69.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.9e-135 486.5 383 64.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.3e-135 485.3 384 68.5
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 5.6e-135 485.0 308 76.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.6e-135 485.0 386 66.1
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 7.3e-135 484.6 388 64.9
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 9.5e-135 484.2 338 71.3
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.5e-135 484.2 398 64.8
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.6e-134 483.4 342 71.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 2.8e-134 482.6 305 76.4
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.7e-134 481.9 303 77.9
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 8.1e-134 481.1 393 63.6
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.4e-133 480.3 305 75.1
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.8e-133 479.9 297 78.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.1e-133 479.2 389 63.8
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.0e-133 478.8 306 76.8
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 5.2e-133 478.4 395 63.3
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.2e-133 478.4 303 77.2
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 8.9e-133 477.6 306 75.8
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.2e-132 477.2 393 64.9
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.0e-132 476.5 306 74.2
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.4e-132 475.3 306 74.2
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.4e-132 475.3 349 67.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 5.8e-132 474.9 346 68.2
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.8e-132 474.9 302 76.2
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 9.9e-132 474.2 303 73.6
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 9.9e-132 474.2 303 73.9
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.3e-131 473.8 300 75.0
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.7e-131 473.4 303 73.9
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.7e-131 473.4 305 75.1
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.2e-131 473.0 346 67.6
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.2e-131 473.0 346 67.6
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 4.9e-131 471.9 306 75.2
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.1e-130 470.7 352 67.3
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.1e-130 470.7 357 67.5
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.4e-130 470.3 349 66.8
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.4e-130 470.3 349 66.8
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.4e-130 470.3 349 66.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.4e-130 469.5 341 70.4
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.1e-129 466.5 388 62.9
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 5.6e-127 458.4 339 67.6
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 7.3e-127 458.0 282 78.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-122 444.1 318 69.8
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 5.4e-122 441.8 349 64.8
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.7e-121 439.5 271 79.7
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-119 434.1 333 66.7
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.5e-119 433.7 300 72.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 7.3e-119 431.4 323 68.1
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 4.9e-115 418.7 289 69.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.4e-114 417.2 295 68.1
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 5.4e-114 415.2 253 79.1
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 7.9e-113 411.4 373 57.4
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.3e-112 409.8 293 67.2
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.2e-99 366.7 297 63.3
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 7.1e-98 361.7 311 63.3
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.1e-93 347.8 295 61.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.2e-84 317.8 287 56.1
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 4.2e-82 309.3 184 79.9
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 6.1e-81 305.4 289 54.0
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 3.3e-79 299.7 295 56.6
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 5.5e-74 282.3 293 47.1
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.3e-64 250.4 218 63.3
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.2e-60 238.0 145 76.6
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.8e-48 197.6 174 58.0
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.3e-46 191.4 126 69.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.0e-33 145.6 102 68.6
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.1e-26 125.2 88 70.5
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 7.8e-20 102.4 182 36.3
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.3e-18 97.1 106 48.1
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.5e-18 95.5 74 63.5
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.4e-16 91.7 67 62.7
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.9e-13 81.3 52 65.4
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 3.6e-09 67.0 131 38.9


User provided reference genes

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