Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 7.1e-54 213.8 115 100.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.5e-32 141.4 114 66.7
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 6.5e-31 137.5 107 70.1
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 5.5e-30 134.4 111 65.8
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 7.1e-30 134.0 103 71.8
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.6e-29 132.9 115 65.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.6e-29 132.9 103 70.9
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 2.7e-29 132.1 115 64.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.6e-29 131.3 101 71.3
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 4.6e-29 131.3 116 66.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.0e-28 130.2 103 70.9
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.0e-28 130.2 108 66.7
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.0e-28 130.2 114 64.9
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 2.3e-28 129.0 115 65.2
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 5.1e-28 127.9 94 70.2
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 5.1e-28 127.9 112 67.0
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 6.7e-28 127.5 112 67.0
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.1e-27 126.7 107 66.4
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.1e-27 126.7 99 67.7
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.5e-27 126.3 109 62.4
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.5e-27 126.3 100 69.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.5e-27 125.6 115 64.3
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.5e-27 125.6 101 64.4
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 3.3e-27 125.2 103 69.9
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 3.3e-27 125.2 111 64.9
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.3e-27 124.8 104 64.4
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 5.7e-27 124.4 107 62.6
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 9.6e-27 123.6 114 62.3
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.3e-26 123.2 103 68.9
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.3e-26 123.2 111 64.0
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 1.6e-26 122.9 107 61.7
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.1e-26 122.5 100 64.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.8e-26 122.1 91 68.1
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 3.7e-26 121.7 107 59.8
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 4.8e-26 121.3 92 70.7
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 4.8e-26 121.3 112 59.8
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 8.2e-26 120.6 109 60.6
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 8.2e-26 120.6 109 60.6
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.1e-25 120.2 91 69.2
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.4e-25 119.8 100 64.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 1.8e-25 119.4 104 61.5
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.4e-25 119.0 112 58.0
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.4e-25 119.0 110 58.2
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 3.1e-25 118.6 100 66.0
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 3.1e-25 118.6 100 67.0
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.1e-25 118.2 94 69.1
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 5.3e-25 117.9 100 63.0
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 5.3e-25 117.9 100 63.0
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 5.3e-25 117.9 94 68.1
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 6.9e-25 117.5 91 70.3
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 9.0e-25 117.1 111 61.3
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 9.0e-25 117.1 103 65.0
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 9.0e-25 117.1 91 67.0
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.5e-24 116.3 100 62.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.0e-24 115.9 106 57.5
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 4.5e-24 114.8 100 61.0
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 4.5e-24 114.8 91 64.8
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.0e-23 113.6 103 59.2
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.3e-23 113.2 103 63.1
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.2e-23 112.5 103 62.1
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 2.9e-23 112.1 103 63.1
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 3.8e-23 111.7 96 61.5
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.8e-23 111.7 100 63.0
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 5.0e-23 111.3 99 60.6
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 6.5e-23 110.9 99 59.6
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 6.5e-23 110.9 92 64.1
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 8.4e-23 110.5 113 59.3
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.1e-22 110.2 100 59.0
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.6e-21 106.3 111 54.1
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.6e-21 106.3 94 61.7
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 2.7e-21 105.5 94 60.6
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 2.7e-21 105.5 94 60.6
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 2.7e-21 105.5 95 58.9
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 6.1e-21 104.4 94 59.6
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.3e-20 103.2 99 56.6
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.8e-20 102.8 91 60.4
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 3.0e-20 102.1 91 60.4
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.0e-20 102.1 91 59.3
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 3.0e-20 102.1 94 61.7
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 5.1e-20 101.3 99 54.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 8.7e-20 100.5 99 62.6
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.1e-19 100.1 112 56.2
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.5e-19 99.0 80 68.8
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 2.5e-19 99.0 101 55.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.3e-19 98.6 101 51.5
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 7.4e-19 97.4 100 57.0
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.3e-18 96.7 110 49.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.8e-18 94.7 112 50.0
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 6.3e-18 94.4 152 42.1
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 8.2e-18 94.0 71 71.8
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.1e-17 93.6 73 68.5
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.5e-16 89.7 84 60.7
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 2.6e-16 89.0 125 44.8
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 7.7e-16 87.4 60 76.7
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 2.9e-15 85.5 68 66.2
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 2.9e-15 85.5 112 43.8
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 7.2e-14 80.9 76 57.9
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 7.2e-14 80.9 85 55.3
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 5.1e-12 74.7 59 67.8
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 6.3e-10 67.8 101 41.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 6.9e-09 64.3 99 41.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.2e-08 63.5 102 42.2
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.0e-07 60.5 111 37.8
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 5.0e-07 58.2 84 45.2


User provided reference genes

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