Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 1.0e-131 473.4 231 100.0
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.2e-31 141.0 253 35.6
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 1.3e-09 67.8 51 62.7
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.3e-09 67.8 64 56.2
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 2.8e-09 66.6 58 55.2
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 2.8e-09 66.6 64 56.2
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 4.8e-09 65.9 85 43.5
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 6.3e-09 65.5 53 56.6
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 8.2e-09 65.1 82 47.6
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.4e-08 64.3 44 70.5
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 2.4e-08 63.5 65 50.8
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.1e-08 63.2 70 48.6
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.1e-08 63.2 70 48.6
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 3.1e-08 63.2 82 46.3
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 3.1e-08 63.2 47 66.0
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 5.3e-08 62.4 78 39.7
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 6.9e-08 62.0 37 70.3
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 9.0e-08 61.6 65 49.2
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 9.0e-08 61.6 65 49.2
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 9.0e-08 61.6 37 70.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 1.2e-07 61.2 37 73.0
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.2e-07 61.2 40 67.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-07 60.8 39 66.7
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-07 60.8 36 75.0
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 1.5e-07 60.8 71 45.1
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.0e-07 60.5 51 56.9
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.0e-07 60.5 64 51.6
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 2.0e-07 60.5 36 75.0
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.0e-07 60.5 54 53.7
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 2.6e-07 60.1 40 65.0
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 2.6e-07 60.1 112 33.0
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 2.6e-07 60.1 65 53.8
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.6e-07 60.1 87 43.7
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 2.6e-07 60.1 44 59.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 2.6e-07 60.1 40 67.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 3.4e-07 59.7 37 70.3
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 3.4e-07 59.7 50 56.0
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 3.4e-07 59.7 40 67.5
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 3.4e-07 59.7 40 67.5
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.4e-07 59.7 45 57.8
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.4e-07 59.7 45 57.8
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 4.5e-07 59.3 37 67.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 4.5e-07 59.3 40 62.5
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.5e-07 59.3 40 62.5
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 5.9e-07 58.9 70 48.6
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 5.9e-07 58.9 45 55.6
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 5.9e-07 58.9 37 64.9
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 5.9e-07 58.9 40 65.0
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 7.7e-07 58.5 63 50.8
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 7.7e-07 58.5 37 64.9
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 7.7e-07 58.5 37 64.9
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 7.7e-07 58.5 64 48.4
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.0e-06 58.2 65 49.2
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.3e-06 57.8 78 39.7
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.3e-06 57.8 54 48.1
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.3e-06 57.8 54 48.1
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 2.2e-06 57.0 73 39.7
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 2.2e-06 57.0 73 41.1
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 2.2e-06 57.0 78 37.2
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.2e-06 57.0 73 39.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.2e-06 57.0 36 66.7
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 2.9e-06 56.6 40 62.5
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 2.9e-06 56.6 40 62.5
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.9e-06 56.6 56 50.0
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 2.9e-06 56.6 73 41.1
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.8e-06 56.2 56 53.6
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 3.8e-06 56.2 61 47.5
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 6.5e-06 55.5 37 59.5
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 6.5e-06 55.5 37 59.5
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 6.5e-06 55.5 73 39.7
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 6.5e-06 55.5 73 39.7
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 6.5e-06 55.5 40 60.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.5e-06 55.1 116 33.6
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 8.5e-06 55.1 39 61.5
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.5e-06 55.1 39 61.5
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.5e-06 55.1 39 61.5
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.5e-06 55.1 39 61.5
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.5e-06 55.1 39 61.5
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 8.5e-06 55.1 56 53.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.5e-06 55.1 55 49.1


User provided reference genes

Program Settings