Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24862 Utricularia gibba HOM05D004368 ORTHO05D004990 5.0e-123 444.5 235 100.0
unitig_27.g24839 Utricularia gibba HOM05D004368 ORTHO05D004990 9.5e-122 440.3 234 99.1
unitig_699.g19383 Utricularia gibba HOM05D004368 ORTHO05D004990 3.3e-106 388.7 234 85.0
Cc06_g01580 Coffea canephora HOM05D004368 ORTHO05D004990 6.9e-96 354.4 225 80.9
Thecc.06G124200 Theobroma cacao HOM05D004368 ORTHO05D004990 2.7e-92 342.4 231 78.8
Duzib235G0527 Durio zibethinus HOM05D004368 ORTHO05D004990 4.6e-92 341.7 232 77.6
QL05p003761 Quercus lobata HOM05D004368 ORTHO05D004990 6.0e-92 341.3 224 78.1
CiPaw.01G216100 Carya illinoinensis HOM05D004368 ORTHO05D004990 1.0e-91 340.5 231 76.2
CSS0030612 Camellia sinensis var. sinensis HOM05D004368 ORTHO05D004990 2.3e-91 339.3 225 78.7
TWI23G0003 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 2.3e-91 339.3 231 75.8
Duzib160G0466 Durio zibethinus HOM05D004368 ORTHO05D004990 1.1e-90 337.0 232 76.7
ECA247G3177 Erigeron canadensis HOM05D004368 ORTHO05D004990 1.5e-90 336.7 220 80.0
SalBow5G3644 Salvia bowleyana HOM05D004368 ORTHO05D004990 1.5e-90 336.7 221 77.8
Actinidia21803 Actinidia chinensis HOM05D004368 ORTHO05D004990 1.9e-90 336.3 231 76.6
Gohir.A05G138800 Gossypium hirsutum HOM05D004368 ORTHO05D004990 2.5e-90 335.9 225 78.7
Gorai.009G145200 Gossypium raimondii HOM05D004368 ORTHO05D004990 2.5e-90 335.9 231 76.6
Oeu064511.1 Olea europaea HOM05D004368 ORTHO05D004990 2.5e-90 335.9 213 81.2
Manes.11G016500 Manihot esculenta HOM05D004368 ORTHO05D004990 3.3e-90 335.5 225 78.2
Hund18675 Selenicereus undatus HOM05D004368 ORTHO05D004990 3.3e-90 335.5 225 76.9
Gohir.D05G141000 Gossypium hirsutum HOM05D004368 ORTHO05D004990 5.6e-90 334.7 225 78.2
Rhsim08G0241200 Rhododendron simsii HOM05D004368 ORTHO05D004990 7.4e-90 334.3 231 75.3
SalBow5G0362 Salvia bowleyana HOM05D004368 ORTHO05D004990 7.4e-90 334.3 221 77.4
HanXRQChr15g0497161 Helianthus annuus HOM05D004368 ORTHO05D004990 2.1e-89 332.8 231 74.0
Eucgr.F02457 Eucalyptus grandis HOM05D004368 ORTHO05D004990 2.8e-89 332.4 231 75.8
ECA248G3608 Erigeron canadensis HOM05D004368 ORTHO05D004990 3.6e-89 332.0 221 77.4
Peaxi162Scf00043g02929 Petunia axillaris HOM05D004368 ORTHO05D004990 3.6e-89 332.0 225 76.9
Actinidia32205 Actinidia chinensis HOM05D004368 ORTHO05D004990 4.8e-89 331.6 231 74.9
Migut.L01998 Erythranthe guttata HOM05D004368 ORTHO05D004990 4.8e-89 331.6 230 73.5
GSVIVG01016719001 Vitis vinifera HOM05D004368 ORTHO05D004990 8.1e-89 330.9 231 74.9
Sopen09g028680 Solanum pennellii HOM05D004368 ORTHO05D004990 1.1e-88 330.5 225 78.2
Sopen09g028700 Solanum pennellii HOM05D004368 ORTHO05D004990 1.1e-88 330.5 225 78.2
Nitab4.5_0000845g0110 Nicotiana tabacum HOM05D004368 ORTHO05D004990 1.4e-88 330.1 225 76.4
Nitab4.5_0003342g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 1.4e-88 330.1 225 76.4
Solyc09g072880.3 Solanum lycopersicum HOM05D004368 ORTHO05D004990 1.4e-88 330.1 225 77.8
PGSC0003DMG400003792 Solanum tuberosum HOM05D004368 ORTHO05D004990 1.8e-88 329.7 225 77.8
COL.COLO4_30792 Corchorus olitorius HOM05D004368 ORTHO05D004990 2.4e-88 329.3 232 75.9
CsaV3_3G030850 Cucumis sativus L. HOM05D000945 ORTHO05D000919 3.1e-88 328.9 231 74.9
Potri.001G166000 Populus trichocarpa HOM05D004368 ORTHO05D004990 3.1e-88 328.9 231 75.8
Sc15g0000580 Simmondsia chinensis HOM05D004368 ORTHO05D004990 4.0e-88 328.6 225 76.4
Ciclev10026090m.g Citrus clementina HOM05D004368 ORTHO05D004990 9.0e-88 327.4 231 73.6
Sed0018133 Sechium edule HOM05D004368 ORTHO05D004990 9.0e-88 327.4 231 74.9
vmacro06407 Vaccinium macrocarpon HOM05D004368 ORTHO05D004990 9.0e-88 327.4 231 74.9
ClCG07G014470 Citrullus lanatus HOM05D004368 ORTHO05D004990 1.2e-87 327.0 231 74.0
Hma1.2p1_0414F.1_g147650 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.5e-87 326.6 231 74.5
CAN.G1487.1 Capsicum annuum HOM05D004368 ORTHO05D004990 2.6e-87 325.9 228 74.6
Haze_16075 Corylus avellana HOM05D004368 ORTHO05D004990 3.4e-87 325.5 225 75.6
Cpa.g.sc25.148 Carica papaya HOM05D004368 ORTHO05D004990 4.5e-87 325.1 212 78.8
Gorai.010G235500 Gossypium raimondii HOM05D004368 ORTHO05D004990 5.8e-87 324.7 225 75.6
TAR626G1097 Trochodendron aralioides HOM05D004368 ORTHO05D004990 5.8e-87 324.7 225 76.0
Gohir.A06G193900 Gossypium hirsutum HOM05D004368 ORTHO05D004990 7.6e-87 324.3 232 73.7
MELO3C022680.2 Cucumis melo HOM05D004368 ORTHO05D004990 1.3e-86 323.6 231 73.6
Gohir.D06G201700 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.7e-86 323.2 225 75.1
Peaxi162Scf01157g00111 Petunia axillaris HOM05D004368 ORTHO05D004990 2.9e-86 322.4 219 76.7
Lsat_1_v5_gn_4_91400 Lactuca sativa HOM05D004368 ORTHO05D004990 6.4e-86 321.2 217 77.4
DCAR_016106 Daucus carota HOM05D004368 ORTHO05D004990 8.4e-86 320.9 219 76.7
DCAR_022662 Daucus carota HOM05D004368 ORTHO05D004990 1.1e-85 320.5 220 75.9
Nn8g38578 Nelumbo nucifera HOM05D004368 ORTHO05D004990 1.1e-85 320.5 221 75.6
Lj9C535T4 Lonicera japonica HOM05D004368 ORTHO05D004990 1.9e-85 319.7 231 73.2
CANSAT56G3889 Cannabis sativa HOM05D004368 ORTHO05D004990 2.4e-85 319.3 231 74.9
MD17G1148400 Malus domestica HOM05D004368 ORTHO05D004990 3.2e-85 318.9 226 74.8
CARHR088970 Cardamine hirsuta HOM05D004368 ORTHO05D004990 2.1e-84 316.2 226 72.6
MBI02_g13231_MAGBIO Magnolia biondii HOM05D004368 ORTHO05D004990 2.7e-84 315.8 220 75.0
AUR62001444 Chenopodium quinoa HOM05D004368 ORTHO05D004990 4.6e-84 315.1 229 72.1
Lj5A32G57 Lonicera japonica HOM05D004368 ORTHO05D004990 4.6e-84 315.1 232 72.0
CAN.G941.28 Capsicum annuum HOM05D004368 ORTHO05D004990 6.0e-84 314.7 227 71.8
FAN09G0342 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.0e-84 314.7 225 75.1
TPR.G29997 Trifolium pratense HOM05D004368 ORTHO05D004990 7.9e-84 314.3 225 71.1
ATR0568G120 Amborella trichopoda HOM05D004368 ORTHO05D004990 1.0e-83 313.9 225 72.4
Aqoxy7G01007 Aquilegia oxysepala HOM05D004368 ORTHO05D004990 1.0e-83 313.9 225 73.8
MD09G1178400 Malus domestica HOM05D004368 ORTHO05D004990 1.0e-83 313.9 226 74.3
Sopen06g002970 Solanum pennellii HOM05D004368 ORTHO05D004990 1.0e-83 313.9 227 70.9
Ah.15g095150 Amaranthus hybridus HOM05D004368 ORTHO05D004990 1.3e-83 313.5 223 73.5
PGR119G1615 Punica granatum HOM05D004368 ORTHO05D004990 1.3e-83 313.5 229 70.7
RcHm_v2.0_Chr2g0146421 Rosa chinensis HOM05D004368 ORTHO05D004990 1.3e-83 313.5 225 74.2
Solyc06g008160.4 Solanum lycopersicum HOM05D004368 ORTHO05D004990 1.8e-83 313.2 227 70.9
FvH4_6g35160 Fragaria vesca HOM05D004368 ORTHO05D004990 2.3e-83 312.8 225 74.7
TAR468G0014 Trochodendron aralioides HOM05D004368 ORTHO05D004990 2.3e-83 312.8 225 72.9
AUR62009921 Chenopodium quinoa HOM05D004368 ORTHO05D004990 3.0e-83 312.4 230 71.7
Medtr8g022040 Medicago truncatula HOM05D004368 ORTHO05D004990 3.0e-83 312.4 226 71.2
Aa31LG8G1340 Aethionema arabicum HOM05D004368 ORTHO05D004990 5.1e-83 311.6 225 72.0
HanXRQChr09g0277121 Helianthus annuus HOM05D004368 ORTHO05D004990 5.1e-83 311.6 221 73.3
FAN02G3674 Fragaria x ananassa HOM05D004368 ORTHO05D004990 8.7e-83 310.8 225 74.2
FAN05G4100 Fragaria x ananassa HOM05D004368 ORTHO05D004990 8.7e-83 310.8 225 74.2
Psat4g167320 Pisum sativum HOM05D004368 ORTHO05D004990 8.7e-83 310.8 226 70.8
Carub.0003s1372 Capsella rubella HOM05D004368 ORTHO05D004990 5.6e-82 308.1 226 72.1
Glyma.16G010200 Glycine max HOM05D004368 ORTHO05D004990 5.6e-82 308.1 229 70.3
AT3G14110 Arabidopsis thaliana HOM05D004368 ORTHO05D004990 7.4e-82 307.8 226 71.7
Sp3g12370 Schrenkiella parvula HOM05D004368 ORTHO05D004990 9.6e-82 307.4 226 71.2
AL3G26340 Arabidopsis lyrata HOM05D004368 ORTHO05D004990 1.3e-81 307.0 221 72.9
BcaB04g18818 Brassica carinata HOM05D004368 ORTHO05D004990 1.6e-81 306.6 227 71.4
A05p35340 Brassica napus HOM05D004368 ORTHO05D004990 1.6e-81 306.6 226 69.9
BraA05t22344Z Brassica rapa HOM05D004368 ORTHO05D004990 1.6e-81 306.6 226 69.9
Lalb_Chr17g0343461 Lupinus albus HOM05D004368 ORTHO05D004990 1.6e-81 306.6 216 73.6
Thhalv10021156m.g Eutrema salsugineum HOM05D004368 ORTHO05D004990 2.8e-81 305.8 226 70.8
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 2.8e-81 305.8 229 70.3
THA.LOC104822665 Tarenaya hassleriana HOM05D004368 ORTHO05D004990 3.7e-81 305.4 219 74.0
EL10Ac7g16443 Beta vulgaris HOM05D004368 ORTHO05D004990 4.8e-81 305.1 223 71.3
A03p38620 Brassica napus HOM05D004368 ORTHO05D004990 6.2e-81 304.7 227 71.8
C05p53530 Brassica napus HOM05D004368 ORTHO05D004990 6.2e-81 304.7 226 69.9
BolC5t34030H Brassica oleracea HOM05D004368 ORTHO05D004990 6.2e-81 304.7 226 69.9
Glyma.07G041700 Glycine max HOM05D004368 ORTHO05D004990 6.2e-81 304.7 229 69.4
BcaC01g03958 Brassica carinata HOM05D004368 ORTHO05D004990 8.1e-81 304.3 227 71.8
BolC3t16938H Brassica oleracea HOM05D004368 ORTHO05D004990 8.1e-81 304.3 227 71.8
Ca_23409_v3 Cicer arietinum L. HOM05D004368 ORTHO05D004990 8.1e-81 304.3 225 70.7
C03p46730 Brassica napus HOM05D004368 ORTHO05D004990 1.1e-80 303.9 227 71.8
Lj3g0026199 Lotus japonicus HOM05D004368 ORTHO05D004990 1.1e-80 303.9 229 69.4
Hma1.2p1_0311F.1_g121230 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.4e-80 303.5 219 73.1
BraA03t13009Z Brassica rapa HOM05D004368 ORTHO05D004990 1.8e-80 303.1 227 71.4
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 4.5e-79 298.5 248 67.3
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 1.0e-78 297.4 229 68.1
Sabra01G0127300 Salix brachista HOM05D004368 ORTHO05D004990 6.5e-78 294.7 290 59.3
PSO386G0078 Papaver somniferum HOM05D004368 ORTHO05D004990 1.4e-77 293.5 224 69.6
PSO724G0024 Papaver somniferum HOM05D004368 ORTHO05D004990 1.4e-77 293.5 224 70.1
Os01g0510600 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 5.5e-77 291.6 217 69.6
Lalb_Chr04g0253731 Lupinus albus HOM05D004368 ORTHO05D004990 9.3e-77 290.8 216 69.4
CDE04G0878 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 1.2e-76 290.4 219 69.4
HPP92_003012 Vanilla planifolia HOM05D004368 ORTHO05D004990 2.3e-75 286.2 222 69.8
Zm00001eb308830 Zea mays HOM05D004368 ORTHO05D004990 1.9e-74 283.1 220 66.8
CDE05G2024 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 4.3e-74 282.0 219 67.6
Nn6g35672 Nelumbo nucifera HOM05D004368 ORTHO05D004990 1.3e-73 280.4 223 66.8
arahy.Tifrunner.gnm1.ann1.26KYL2 Arachis hypogaea HOM05D004368 ORTHO05D004990 2.6e-71 272.7 232 63.8
BcaC05g29122 Brassica carinata HOM05D004368 ORTHO05D004990 1.7e-70 270.0 226 63.7
arahy.Tifrunner.gnm1.ann1.AFL61P Arachis hypogaea HOM05D004368 ORTHO05D004990 2.2e-70 269.6 176 76.7
Atru.chr1.4073 Acer truncatum HOM05D004368 ORTHO05D004990 2.5e-69 266.2 176 79.0
SGA_v2.0_scaffold110G31269 Striga asiatica HOM05D004368 ORTHO05D004990 1.6e-68 263.5 319 50.5
Nitab4.5_0006980g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 6.1e-68 261.5 168 79.2
Gorai.004G102400 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.1e-66 257.3 189 73.0
Os02g0586800 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 6.3e-65 251.5 220 62.7
Nitab4.5_0000326g0270 Nicotiana tabacum HOM05D004368 ORTHO05D004990 8.2e-65 251.1 165 78.2
Atru.chr1.4083 Acer truncatum HOM05D004368 ORTHO05D004990 5.5e-61 238.4 187 70.6
Gorai.001G096600 Gossypium raimondii HOM05D004368 ORTHO05D004990 5.5e-61 238.4 201 67.7
Gohir.D08G096333 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.0e-59 232.6 189 68.8
Mapoly0108s0002 Marchantia polymorpha HOM05D004368 ORTHO05D004990 5.1e-59 231.9 228 57.5
Mapoly0110s0050 Marchantia polymorpha HOM05D004368 ORTHO05D004990 5.1e-59 231.9 228 57.5
Gohir.D07G090325 Gossypium hirsutum HOM05D004368 ORTHO05D004990 8.8e-59 231.1 173 72.3
AagrBONN_evm.TU.Sc2ySwM_228.3011 Anthoceros agrestis HOM05D004368 ORTHO05D004990 1.1e-58 230.7 188 64.4
Dinv20409 Davidia involucrata HOM05D004368 ORTHO05D004990 1.1e-56 224.2 191 64.9
Prupe.3G037600 Prunus persica HOM05D004368 ORTHO05D004990 3.4e-55 219.2 161 72.0
Dinv37846 Davidia involucrata HOM05D004368 ORTHO05D004990 4.5e-55 218.8 159 74.2
Pp3c11_3130 Physcomitrium patens HOM05D004368 ORTHO05D004990 1.4e-53 213.8 184 60.3
CBR_g39266 Chara braunii HOM05D004368 ORTHO05D004990 4.7e-52 208.8 180 61.1
FAN05G2230 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.1e-52 208.4 159 73.6
CDE05G2107 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 6.7e-51 204.9 178 61.8
SMO141G0180 Selaginella moellendorffii HOM05D004368 ORTHO05D004990 5.7e-50 201.8 185 57.8
Rhsim03G0211800 Rhododendron simsii HOM05D004368 ORTHO05D004990 5.0e-46 188.7 246 46.7
HPP92_027544 Vanilla planifolia HOM05D004368 ORTHO05D004990 3.2e-45 186.0 162 65.4
Zm00001eb245590 Zea mays HOM05D004368 ORTHO05D004990 2.9e-38 162.9 155 57.4
TWI14G0995 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 1.6e-28 130.6 231 38.1
Cre10.g460050 Chlamydomonas reinhardtii HOM05D004368 ORTHO05D004990 4.7e-28 129.0 241 33.6
PGSC0003DMG400014712 Solanum tuberosum HOM05D004368 ORTHO05D004990 2.4e-24 116.7 67 80.6
MCO11G340 Micromonas commoda HOM05D004368 ORTHO05D004990 7.3e-21 105.1 233 33.5
PRCOL_00003238 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 1.5e-18 97.4 207 33.3
MCO14G328 Micromonas commoda HOM05D004368 ORTHO05D004990 6.4e-17 92.0 235 31.5
PRCOL_00003077 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 2.8e-12 76.6 199 29.1
SGA_v2.0_scaffold382G50397 Striga asiatica HOM05D004368 ORTHO05D004990 3.6e-12 76.3 41 82.9
TAR624G0904 Trochodendron aralioides HOM05D004368 ORTHO05D004990 3.4e-10 69.7 55 67.3
CBR_g29854 Chara braunii HOM05D004368 ORTHO05D004990 1.7e-09 67.4 72 52.8
Nitab4.5_0000780g0100 Nicotiana tabacum HOM05D004368 ORTHO05D004990 8.3e-09 65.1 168 29.2
TAR624G0589 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.9e-08 63.9 50 62.0
MCO15G457 Micromonas commoda HOM05D004368 ORTHO05D268172 4.6e-07 59.3 223 27.4
RcHm_v2.0_Chr5g0074611 Rosa chinensis HOM05D004368 ORTHO05D004990 1.3e-06 57.8 52 61.5


User provided reference genes

Program Settings