Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24839 Utricularia gibba HOM05D004368 ORTHO05D004990 6.9e-165 583.9 303 100.0
unitig_699.g19383 Utricularia gibba HOM05D004368 ORTHO05D004990 1.5e-124 449.9 309 77.3
unitig_27.g24862 Utricularia gibba HOM05D004368 ORTHO05D004990 7.2e-122 441.0 234 99.1
Cc06_g01580 Coffea canephora HOM05D004368 ORTHO05D004990 1.8e-101 373.2 304 67.4
SalBow5G3644 Salvia bowleyana HOM05D004368 ORTHO05D004990 2.7e-100 369.4 306 67.3
SalBow5G0362 Salvia bowleyana HOM05D004368 ORTHO05D004990 5.9e-100 368.2 306 67.0
Migut.L01998 Erythranthe guttata HOM05D004368 ORTHO05D004990 9.5e-98 360.9 315 62.2
CiPaw.01G216100 Carya illinoinensis HOM05D004368 ORTHO05D004990 1.6e-92 343.6 307 63.2
Duzib235G0527 Durio zibethinus HOM05D004368 ORTHO05D004990 1.6e-92 343.6 232 78.0
Thecc.06G124200 Theobroma cacao HOM05D004368 ORTHO05D004990 2.0e-92 343.2 228 79.8
QL05p003761 Quercus lobata HOM05D004368 ORTHO05D004990 2.7e-92 342.8 224 78.6
Hund18675 Selenicereus undatus HOM05D004368 ORTHO05D004990 2.7e-92 342.8 263 68.8
CSS0030612 Camellia sinensis var. sinensis HOM05D004368 ORTHO05D004990 7.8e-92 341.3 225 79.1
Peaxi162Scf01157g00111 Petunia axillaris HOM05D004368 ORTHO05D004990 1.7e-91 340.1 301 63.5
TWI23G0003 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 2.3e-91 339.7 231 75.8
Rhsim08G0241200 Rhododendron simsii HOM05D004368 ORTHO05D004990 3.8e-91 339.0 250 72.4
Duzib160G0466 Durio zibethinus HOM05D004368 ORTHO05D004990 5.0e-91 338.6 224 79.0
Actinidia21803 Actinidia chinensis HOM05D004368 ORTHO05D004990 6.6e-91 338.2 245 74.3
Gohir.A05G138800 Gossypium hirsutum HOM05D004368 ORTHO05D004990 8.6e-91 337.8 225 79.1
Manes.11G016500 Manihot esculenta HOM05D004368 ORTHO05D004990 1.1e-90 337.4 225 78.7
Oeu064511.1 Olea europaea HOM05D004368 ORTHO05D004990 1.1e-90 337.4 213 81.7
Gorai.009G145200 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.5e-90 337.0 225 78.7
Gohir.D05G141000 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.9e-90 336.7 225 78.7
ECA247G3177 Erigeron canadensis HOM05D004368 ORTHO05D004990 2.5e-90 336.3 220 79.5
HanXRQChr15g0497161 Helianthus annuus HOM05D004368 ORTHO05D004990 7.3e-90 334.7 218 77.5
Actinidia32205 Actinidia chinensis HOM05D004368 ORTHO05D004990 9.5e-90 334.3 251 71.3
Peaxi162Scf00043g02929 Petunia axillaris HOM05D004368 ORTHO05D004990 1.2e-89 334.0 225 77.3
Sopen06g002970 Solanum pennellii HOM05D004368 ORTHO05D004990 1.2e-89 334.0 306 60.1
ECA248G3608 Erigeron canadensis HOM05D004368 ORTHO05D004990 1.6e-89 333.6 221 77.8
GSVIVG01016719001 Vitis vinifera HOM05D004368 ORTHO05D004990 1.6e-89 333.6 250 71.6
Eucgr.F02457 Eucalyptus grandis HOM05D004368 ORTHO05D004990 2.8e-89 332.8 229 76.4
Sopen09g028680 Solanum pennellii HOM05D004368 ORTHO05D004990 3.6e-89 332.4 225 78.7
Sopen09g028700 Solanum pennellii HOM05D004368 ORTHO05D004990 3.6e-89 332.4 225 78.7
Solyc09g072880.3 Solanum lycopersicum HOM05D004368 ORTHO05D004990 4.7e-89 332.0 225 78.2
Nitab4.5_0000845g0110 Nicotiana tabacum HOM05D004368 ORTHO05D004990 6.1e-89 331.6 225 76.9
Nitab4.5_0003342g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 6.1e-89 331.6 225 76.9
PGSC0003DMG400003792 Solanum tuberosum HOM05D004368 ORTHO05D004990 6.1e-89 331.6 225 78.2
CAN.G941.28 Capsicum annuum HOM05D004368 ORTHO05D004990 8.0e-89 331.3 307 59.9
COL.COLO4_30792 Corchorus olitorius HOM05D004368 ORTHO05D004990 8.0e-89 331.3 232 76.3
Sc15g0000580 Simmondsia chinensis HOM05D004368 ORTHO05D004990 1.4e-88 330.5 225 76.9
Ciclev10026090m.g Citrus clementina HOM05D004368 ORTHO05D004990 1.8e-88 330.1 239 72.8
Potri.001G166000 Populus trichocarpa HOM05D004368 ORTHO05D004990 1.8e-88 330.1 225 77.8
Haze_16075 Corylus avellana HOM05D004368 ORTHO05D004990 2.3e-88 329.7 281 65.5
Solyc06g008160.4 Solanum lycopersicum HOM05D004368 ORTHO05D004990 2.3e-88 329.7 303 59.1
CsaV3_3G030850 Cucumis sativus L. HOM05D000945 ORTHO05D000919 3.0e-88 329.3 226 76.5
Hma1.2p1_0414F.1_g147650 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 3.0e-88 329.3 310 60.3
CAN.G1487.1 Capsicum annuum HOM05D004368 ORTHO05D004990 4.0e-88 328.9 233 73.8
vmacro06407 Vaccinium macrocarpon HOM05D004368 ORTHO05D004990 4.0e-88 328.9 250 71.6
Sed0018133 Sechium edule HOM05D004368 ORTHO05D004990 8.9e-88 327.8 226 76.5
ClCG07G014470 Citrullus lanatus HOM05D004368 ORTHO05D004990 1.2e-87 327.4 226 75.7
Gorai.010G235500 Gossypium raimondii HOM05D004368 ORTHO05D004990 2.0e-87 326.6 225 76.0
CANSAT56G3889 Cannabis sativa HOM05D004368 ORTHO05D004990 2.6e-87 326.2 301 62.1
Cpa.g.sc25.148 Carica papaya HOM05D004368 ORTHO05D004990 2.6e-87 326.2 212 79.2
Gohir.A06G193900 Gossypium hirsutum HOM05D004368 ORTHO05D004990 2.6e-87 326.2 232 74.1
TAR626G1097 Trochodendron aralioides HOM05D004368 ORTHO05D004990 4.4e-87 325.5 225 76.0
Gohir.D06G201700 Gossypium hirsutum HOM05D004368 ORTHO05D004990 5.7e-87 325.1 225 75.6
MELO3C022680.2 Cucumis melo HOM05D004368 ORTHO05D004990 1.3e-86 323.9 226 75.2
DCAR_016106 Daucus carota HOM05D004368 ORTHO05D004990 2.9e-86 322.8 219 77.2
DCAR_022662 Daucus carota HOM05D004368 ORTHO05D004990 2.9e-86 322.8 263 66.9
Lsat_1_v5_gn_4_91400 Lactuca sativa HOM05D004368 ORTHO05D004990 2.9e-86 322.8 217 77.9
MD17G1148400 Malus domestica HOM05D004368 ORTHO05D004990 4.9e-86 322.0 267 67.0
Nn8g38578 Nelumbo nucifera HOM05D004368 ORTHO05D004990 4.9e-86 322.0 221 76.0
Lj9C535T4 Lonicera japonica HOM05D004368 ORTHO05D004990 1.1e-85 320.9 225 75.1
CARHR088970 Cardamine hirsuta HOM05D004368 ORTHO05D004990 7.0e-85 318.2 226 73.0
MBI02_g13231_MAGBIO Magnolia biondii HOM05D004368 ORTHO05D004990 9.2e-85 317.8 220 75.5
FAN09G0342 Fragaria x ananassa HOM05D004368 ORTHO05D004990 2.0e-84 316.6 225 75.6
Lj5A32G57 Lonicera japonica HOM05D004368 ORTHO05D004990 2.0e-84 316.6 221 75.1
TPR.G29997 Trifolium pratense HOM05D004368 ORTHO05D004990 2.7e-84 316.2 225 71.6
ATR0568G120 Amborella trichopoda HOM05D004368 ORTHO05D004990 3.5e-84 315.8 225 72.9
Aqoxy7G01007 Aquilegia oxysepala HOM05D004368 ORTHO05D004990 3.5e-84 315.8 225 74.2
AUR62001444 Chenopodium quinoa HOM05D004368 ORTHO05D004990 3.5e-84 315.8 286 61.9
MD09G1178400 Malus domestica HOM05D004368 ORTHO05D004990 3.5e-84 315.8 226 74.8
PGR119G1615 Punica granatum HOM05D004368 ORTHO05D004990 4.6e-84 315.5 229 71.2
RcHm_v2.0_Chr2g0146421 Rosa chinensis HOM05D004368 ORTHO05D004990 4.6e-84 315.5 225 74.7
Ah.15g095150 Amaranthus hybridus HOM05D004368 ORTHO05D004990 5.9e-84 315.1 223 74.0
FvH4_6g35160 Fragaria vesca HOM05D004368 ORTHO05D004990 7.8e-84 314.7 225 75.1
Medtr8g022040 Medicago truncatula HOM05D004368 ORTHO05D004990 1.0e-83 314.3 226 71.7
AUR62009921 Chenopodium quinoa HOM05D004368 ORTHO05D004990 1.3e-83 313.9 230 72.2
TAR468G0014 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.7e-83 313.5 225 72.9
Aa31LG8G1340 Aethionema arabicum HOM05D004368 ORTHO05D004990 2.3e-83 313.2 225 72.4
HanXRQChr09g0277121 Helianthus annuus HOM05D004368 ORTHO05D004990 2.3e-83 313.2 221 73.8
FAN02G3674 Fragaria x ananassa HOM05D004368 ORTHO05D004990 3.0e-83 312.8 225 74.7
FAN05G4100 Fragaria x ananassa HOM05D004368 ORTHO05D004990 3.0e-83 312.8 225 74.7
Psat4g167320 Pisum sativum HOM05D004368 ORTHO05D004990 3.0e-83 312.8 226 71.2
Glyma.16G010200 Glycine max HOM05D004368 ORTHO05D004990 1.1e-82 310.8 232 70.3
Carub.0003s1372 Capsella rubella HOM05D004368 ORTHO05D004990 1.9e-82 310.1 226 72.6
AT3G14110 Arabidopsis thaliana HOM05D004368 ORTHO05D004990 2.5e-82 309.7 226 72.1
Sp3g12370 Schrenkiella parvula HOM05D004368 ORTHO05D004990 3.3e-82 309.3 226 71.7
Ca_23409_v3 Cicer arietinum L. HOM05D004368 ORTHO05D004990 4.3e-82 308.9 303 58.4
AL3G26340 Arabidopsis lyrata HOM05D004368 ORTHO05D004990 5.6e-82 308.5 221 73.3
BcaB04g18818 Brassica carinata HOM05D004368 ORTHO05D004990 5.6e-82 308.5 227 71.8
A05p35340 Brassica napus HOM05D004368 ORTHO05D004990 5.6e-82 308.5 226 70.4
BraA05t22344Z Brassica rapa HOM05D004368 ORTHO05D004990 5.6e-82 308.5 226 70.4
Lj3g0026199 Lotus japonicus HOM05D004368 ORTHO05D004990 5.6e-82 308.5 254 65.4
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 5.6e-82 308.5 232 70.3
Lalb_Chr17g0343461 Lupinus albus HOM05D004368 ORTHO05D004990 7.3e-82 308.1 247 66.8
Thhalv10021156m.g Eutrema salsugineum HOM05D004368 ORTHO05D004990 9.5e-82 307.8 226 71.2
Glyma.07G041700 Glycine max HOM05D004368 ORTHO05D004990 1.2e-81 307.4 232 69.4
A03p38620 Brassica napus HOM05D004368 ORTHO05D004990 1.6e-81 307.0 288 60.8
THA.LOC104822665 Tarenaya hassleriana HOM05D004368 ORTHO05D004990 1.6e-81 307.0 219 74.4
EL10Ac7g16443 Beta vulgaris HOM05D004368 ORTHO05D004990 2.1e-81 306.6 223 71.7
C05p53530 Brassica napus HOM05D004368 ORTHO05D004990 2.1e-81 306.6 226 70.4
BolC5t34030H Brassica oleracea HOM05D004368 ORTHO05D004990 2.1e-81 306.6 226 70.4
BcaC01g03958 Brassica carinata HOM05D004368 ORTHO05D004990 2.8e-81 306.2 227 72.2
BolC3t16938H Brassica oleracea HOM05D004368 ORTHO05D004990 2.8e-81 306.2 227 72.2
C03p46730 Brassica napus HOM05D004368 ORTHO05D004990 3.6e-81 305.8 227 72.2
Hma1.2p1_0311F.1_g121230 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 4.7e-81 305.4 219 73.5
BraA03t13009Z Brassica rapa HOM05D004368 ORTHO05D004990 6.2e-81 305.1 227 71.8
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 1.5e-79 300.4 248 67.7
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 2.0e-79 300.1 232 68.1
Sabra01G0127300 Salix brachista HOM05D004368 ORTHO05D004990 2.2e-78 296.6 290 59.7
SGA_v2.0_scaffold110G31269 Striga asiatica HOM05D004368 ORTHO05D004990 2.9e-78 296.2 401 46.6
PSO386G0078 Papaver somniferum HOM05D004368 ORTHO05D004990 6.4e-78 295.0 224 70.1
PSO724G0024 Papaver somniferum HOM05D004368 ORTHO05D004990 6.4e-78 295.0 224 70.5
CDE04G0878 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 4.1e-77 292.4 219 69.9
Lalb_Chr04g0253731 Lupinus albus HOM05D004368 ORTHO05D004990 4.1e-77 292.4 216 69.9
Os01g0510600 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 5.4e-77 292.0 217 69.6
HPP92_003012 Vanilla planifolia HOM05D004368 ORTHO05D004990 5.0e-75 285.4 222 69.4
CDE05G2024 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 1.5e-74 283.9 219 68.0
Zm00001eb308830 Zea mays HOM05D004368 ORTHO05D004990 2.5e-74 283.1 220 66.8
Nn6g35672 Nelumbo nucifera HOM05D004368 ORTHO05D004990 9.5e-74 281.2 320 52.8
arahy.Tifrunner.gnm1.ann1.26KYL2 Arachis hypogaea HOM05D004368 ORTHO05D004990 8.9e-72 274.6 232 64.2
BcaC05g29122 Brassica carinata HOM05D004368 ORTHO05D004990 7.5e-71 271.6 226 64.2
arahy.Tifrunner.gnm1.ann1.AFL61P Arachis hypogaea HOM05D004368 ORTHO05D004990 9.9e-71 271.2 176 77.3
Atru.chr1.4073 Acer truncatum HOM05D004368 ORTHO05D004990 1.4e-69 267.3 176 79.5
Nitab4.5_0006980g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.7e-68 263.1 168 79.8
Gorai.004G102400 Gossypium raimondii HOM05D004368 ORTHO05D004990 5.1e-67 258.8 189 73.5
Os02g0586800 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 7.3e-66 255.0 256 57.4
Nitab4.5_0000326g0270 Nicotiana tabacum HOM05D004368 ORTHO05D004990 3.6e-65 252.7 165 78.8
Gorai.001G096600 Gossypium raimondii HOM05D004368 ORTHO05D004990 3.2e-61 239.6 201 68.2
Atru.chr1.4083 Acer truncatum HOM05D004368 ORTHO05D004990 7.1e-61 238.4 196 68.9
Gohir.D08G096333 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.7e-59 233.8 189 69.3
Gohir.D07G090325 Gossypium hirsutum HOM05D004368 ORTHO05D004990 5.1e-59 232.3 173 72.8
Mapoly0108s0002 Marchantia polymorpha HOM05D004368 ORTHO05D004990 5.1e-59 232.3 228 57.5
Mapoly0110s0050 Marchantia polymorpha HOM05D004368 ORTHO05D004990 5.1e-59 232.3 228 57.5
AagrBONN_evm.TU.Sc2ySwM_228.3011 Anthoceros agrestis HOM05D004368 ORTHO05D004990 1.5e-58 230.7 188 64.4
Dinv20409 Davidia involucrata HOM05D004368 ORTHO05D004990 8.1e-57 224.9 159 74.2
Prupe.3G037600 Prunus persica HOM05D004368 ORTHO05D004990 3.4e-55 219.5 161 72.0
Dinv37846 Davidia involucrata HOM05D004368 ORTHO05D004990 4.4e-55 219.2 159 74.2
Pp3c11_3130 Physcomitrium patens HOM05D004368 ORTHO05D004990 3.2e-53 213.0 184 59.8
FAN05G2230 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.0e-52 208.8 159 73.6
CBR_g39266 Chara braunii HOM05D004368 ORTHO05D004990 1.0e-51 208.0 180 60.6
CDE05G2107 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 6.6e-51 205.3 178 61.8
SMO141G0180 Selaginella moellendorffii HOM05D004368 ORTHO05D004990 5.6e-50 202.2 185 57.8
Rhsim03G0211800 Rhododendron simsii HOM05D004368 ORTHO05D004990 7.6e-47 191.8 261 46.0
HPP92_027544 Vanilla planifolia HOM05D004368 ORTHO05D004990 3.2e-45 186.4 162 65.4
Zm00001eb245590 Zea mays HOM05D004368 ORTHO05D004990 3.8e-38 162.9 155 57.4
TWI14G0995 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 7.1e-29 132.1 231 38.5
Cre10.g460050 Chlamydomonas reinhardtii HOM05D004368 ORTHO05D004990 6.0e-28 129.0 241 33.6
PGSC0003DMG400014712 Solanum tuberosum HOM05D004368 ORTHO05D004990 1.1e-24 118.2 67 82.1
MCO11G340 Micromonas commoda HOM05D004368 ORTHO05D004990 9.4e-21 105.1 233 33.5
PRCOL_00003238 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 1.5e-18 97.8 207 33.3
MCO14G328 Micromonas commoda HOM05D004368 ORTHO05D004990 6.3e-17 92.4 235 31.5
PRCOL_00003077 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 1.6e-12 77.8 199 29.6
SGA_v2.0_scaffold382G50397 Striga asiatica HOM05D004368 ORTHO05D004990 4.7e-12 76.3 41 82.9
MSTRG.5591 Avicennia marina HOM05D004368 ORTHO05D004990 1.4e-11 74.7 117 39.3
TAR624G0904 Trochodendron aralioides HOM05D004368 ORTHO05D004990 4.4e-10 69.7 55 67.3
CBR_g29854 Chara braunii HOM05D004368 ORTHO05D004990 2.2e-09 67.4 72 52.8
Nitab4.5_0000780g0100 Nicotiana tabacum HOM05D004368 ORTHO05D004990 6.3e-09 65.9 168 29.2
TAR624G0589 Trochodendron aralioides HOM05D004368 ORTHO05D004990 2.4e-08 63.9 50 62.0
MCO15G457 Micromonas commoda HOM05D004368 ORTHO05D268172 3.4e-07 60.1 223 27.4
RcHm_v2.0_Chr5g0074611 Rosa chinensis HOM05D004368 ORTHO05D004990 1.3e-06 58.2 52 61.5


User provided reference genes

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