Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 9.7e-258 892.9 426 100.0
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 4.1e-30 136.7 270 34.8
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 2.3e-25 120.9 259 34.4
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 6.5e-20 102.8 244 32.0
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 9.4e-19 99.0 224 34.4
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 1.2e-18 98.6 256 33.6
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 1.4e-17 95.1 233 33.9
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 1.2e-16 92.0 244 32.4
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 1.2e-16 92.0 405 28.9
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.5e-16 91.7 255 31.4
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.5e-16 91.7 255 31.4
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.6e-16 90.9 254 29.1
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.4e-16 90.1 263 30.0
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.4e-16 90.1 263 30.0
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 5.7e-16 89.7 255 31.0
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 5.7e-16 89.7 253 28.9
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.7e-15 88.2 327 27.8
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.8e-15 87.4 241 31.1
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 3.7e-15 87.0 273 30.0
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 3.7e-15 87.0 199 34.2
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 4.8e-15 86.7 240 29.6
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 4.8e-15 86.7 241 31.1
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 6.3e-15 86.3 259 27.8
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 6.3e-15 86.3 239 29.7
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 6.3e-15 86.3 97 48.5
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 6.3e-15 86.3 96 45.8
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.4e-14 85.1 289 28.0
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.4e-14 84.3 289 27.7
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 3.1e-14 84.0 97 46.4
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 4.1e-14 83.6 249 28.5
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 5.4e-14 83.2 126 38.1
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 7.0e-14 82.8 84 53.6
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 7.0e-14 82.8 56 66.1
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 9.1e-14 82.4 56 66.1
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 1.2e-13 82.0 56 64.3
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 1.2e-13 82.0 53 67.9
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 1.2e-13 82.0 54 66.7
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 1.2e-13 82.0 259 30.1
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 1.6e-13 81.6 60 61.7
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 1.6e-13 81.6 80 51.2
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 2.0e-13 81.3 56 66.1
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 2.0e-13 81.3 305 28.9
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 3.5e-13 80.5 237 33.8
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.5e-13 80.1 53 67.9
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 5.9e-13 79.7 54 63.0
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 5.9e-13 79.7 80 48.8
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 7.7e-13 79.3 97 41.2
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 7.7e-13 79.3 172 33.7
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 1.0e-12 79.0 56 62.5
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 1.3e-12 78.6 71 56.3
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.7e-12 78.2 56 62.5
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.7e-12 78.2 52 65.4
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-12 77.8 53 64.2
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-12 77.8 53 64.2
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-12 77.8 53 64.2
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 2.2e-12 77.8 55 61.8
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.2e-12 77.8 52 65.4
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.8e-12 77.0 54 64.8
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 3.8e-12 77.0 55 61.8
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.8e-12 77.0 56 60.7
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 5.0e-12 76.6 54 61.1
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 5.0e-12 76.6 56 60.7
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 6.5e-12 76.3 52 65.4
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.5e-12 76.3 52 61.5
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 6.5e-12 76.3 54 61.1
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 6.5e-12 76.3 54 61.1
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 8.5e-12 75.9 52 61.5
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 1.1e-11 75.5 56 58.9
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 1.1e-11 75.5 54 59.3
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 1.1e-11 75.5 54 59.3
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 1.5e-11 75.1 53 60.4
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 1.5e-11 75.1 51 64.7
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 1.9e-11 74.7 46 69.6
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.9e-11 74.7 54 59.3
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.9e-11 74.7 56 60.7
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 3.2e-11 73.9 54 61.1
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 3.2e-11 73.9 54 61.1
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 5.5e-11 73.2 56 53.6
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 9.4e-11 72.4 53 56.6
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 9.4e-11 72.4 53 56.6
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 9.4e-11 72.4 45 75.6
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 1.2e-10 72.0 56 55.4
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.2e-10 72.0 54 61.1
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 2.7e-10 70.9 52 57.7
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 1.0e-09 68.9 52 59.6
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 1.4e-09 68.6 55 52.7
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 1.8e-09 68.2 247 28.7
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 3.0e-09 67.4 385 23.9
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 7.5e-08 62.8 54 55.6
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 9.8e-08 62.4 52 55.8
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.3e-07 62.0 54 55.6
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 3.7e-07 60.5 54 50.0


User provided reference genes

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