Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 2.8e-213 745.0 367 100.0
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 2.4e-103 379.8 370 54.9
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.1e-100 370.9 388 53.9
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 2.5e-100 369.8 308 60.4
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.6e-97 359.8 372 52.7
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 9.7e-97 357.8 371 53.1
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 3.8e-93 345.9 324 55.6
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 5.0e-93 345.5 278 61.5
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 3.2e-92 342.8 305 56.4
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 4.2e-92 342.4 335 54.0
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 2.1e-91 340.1 298 57.4
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.3e-90 336.7 298 56.7
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 3.0e-90 336.3 298 57.0
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 5.2e-90 335.5 296 57.4
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 5.2e-90 335.5 300 57.7
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.0e-89 333.6 302 56.0
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.3e-88 330.9 369 48.8
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.7e-88 330.5 364 51.4
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.7e-88 330.5 306 57.2
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 2.2e-88 330.1 325 54.5
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 2.8e-88 329.7 305 55.4
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 3.7e-88 329.3 335 52.5
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 3.7e-88 329.3 344 51.7
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 3.7e-88 329.3 305 54.8
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 8.2e-88 328.2 305 55.1
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.1e-87 327.8 303 55.8
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 1.8e-87 327.0 298 56.0
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 2.4e-87 326.6 299 58.2
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 2.4e-87 326.6 319 55.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 7.0e-87 325.1 305 55.7
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 9.1e-87 324.7 301 55.1
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 9.1e-87 324.7 295 58.0
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.2e-86 324.3 320 53.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.6e-86 323.9 310 54.5
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.6e-86 323.9 325 51.7
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 2.6e-86 323.2 325 51.4
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.9e-86 322.0 325 52.0
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 7.7e-86 321.6 327 52.3
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 7.7e-86 321.6 314 53.2
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 7.7e-86 321.6 378 45.5
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.7e-85 320.5 296 56.1
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 1.7e-85 320.5 376 46.5
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 2.9e-85 319.7 306 52.6
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.1e-84 317.8 295 54.9
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.5e-84 317.4 287 56.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 1.5e-84 317.4 296 54.1
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 5.5e-84 315.5 297 56.6
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 7.2e-84 315.1 301 54.2
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 9.4e-84 314.7 309 54.0
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.2e-83 314.3 304 53.6
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.1e-83 313.5 295 53.2
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.7e-83 313.2 297 53.2
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 4.7e-83 312.4 297 53.9
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 4.7e-83 312.4 298 53.4
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 1.0e-82 311.2 350 47.4
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 1.8e-82 310.5 294 55.4
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 2.3e-82 310.1 384 45.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 8.8e-82 308.1 300 53.0
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-81 307.4 299 52.8
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.0e-81 307.0 290 55.9
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 2.0e-81 307.0 353 46.7
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 5.7e-81 305.4 294 52.0
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 7.5e-81 305.1 291 55.0
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.7e-80 303.9 297 52.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.7e-80 303.9 297 52.2
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 2.2e-80 303.5 313 50.8
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 2.2e-80 303.5 292 53.8
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 2.8e-80 303.1 308 50.0
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 4.8e-80 302.4 298 52.3
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 6.3e-80 302.0 312 49.0
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 6.3e-80 302.0 339 46.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.8e-79 300.4 320 48.4
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 3.1e-79 299.7 289 51.2
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 3.1e-79 299.7 322 49.1
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 5.3e-79 298.9 305 50.5
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 9.1e-79 298.1 281 56.6
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.2e-78 297.7 372 46.5
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 2.0e-78 297.0 317 48.9
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 2.0e-78 297.0 291 52.2
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 2.5e-76 290.0 268 56.7
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 5.5e-76 288.9 308 48.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 7.5e-73 278.5 296 48.6
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 3.7e-72 276.2 335 47.2
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.4e-71 274.2 294 49.7
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 4.1e-71 272.7 324 44.8
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.3e-69 267.7 224 58.5
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 7.2e-68 261.9 276 49.6
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 1.2e-67 261.2 261 52.5
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.6e-65 253.4 295 44.7
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 9.2e-63 245.0 239 54.4
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 3.3e-60 236.5 251 49.8
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 7.3e-60 235.3 333 41.1
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 9.2e-55 218.4 337 38.3
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.6e-53 212.2 316 39.6
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.3e-45 188.0 357 35.6
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 8.1e-43 178.7 292 35.6
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 9.9e-41 171.8 172 52.3
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 2.3e-37 160.6 305 32.8
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 8.6e-37 158.7 158 50.6
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 7.1e-31 139.0 146 52.1
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 9.2e-31 138.7 155 47.7
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 4.4e-25 119.8 140 50.0
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.2e-23 113.2 112 51.8
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 2.7e-22 110.5 103 57.3
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 7.8e-22 109.0 295 30.5
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.5e-20 104.8 271 28.4
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 5.3e-18 96.3 82 52.4
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 9.0e-18 95.5 118 44.9
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 9.3e-07 58.9 99 41.4


User provided reference genes

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