Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9983 Utricularia gibba HOM05D005114 ORTHO05D006301 7.5e-71 270.4 135 100.0
unitig_749.g13979 Utricularia gibba HOM05D005114 ORTHO05D006301 1.6e-60 236.1 135 86.7
unitig_0.g2368 Utricularia gibba HOM05D005114 ORTHO05D006301 4.9e-38 161.4 133 63.9
SalBow5G2991 Salvia bowleyana HOM05D005114 ORTHO05D006301 3.9e-35 151.8 137 56.9
SalBow5G4655 Salvia bowleyana HOM05D005114 ORTHO05D006301 3.9e-35 151.8 137 56.9
Migut.N01364 Erythranthe guttata HOM05D005114 ORTHO05D006301 5.1e-35 151.4 138 60.1
MSTRG.27609 Avicennia marina HOM05D005114 ORTHO05D006301 2.4e-32 142.5 136 56.6
Duzib132G0223 Durio zibethinus HOM05D005114 ORTHO05D006301 3.8e-30 135.2 122 59.8
Thecc.02G147000 Theobroma cacao HOM05D005114 ORTHO05D006301 4.9e-30 134.8 136 53.7
Duzib248G1587 Durio zibethinus HOM05D005114 ORTHO05D006301 6.4e-30 134.4 136 54.4
Lsat_1_v5_gn_3_48420 Lactuca sativa HOM05D005114 ORTHO05D006301 8.4e-30 134.0 129 54.3
Gohir.D12G013600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.1e-29 133.7 128 56.2
Gorai.008G013600 Gossypium raimondii HOM05D005114 ORTHO05D006301 1.1e-29 133.7 128 56.2
Gohir.A03G170500 Gossypium hirsutum HOM05D005114 ORTHO05D006301 3.2e-29 132.1 139 54.0
Gorai.005G216400 Gossypium raimondii HOM05D005114 ORTHO05D006301 3.2e-29 132.1 139 54.0
MD05G1140900 Malus domestica HOM05D005114 ORTHO05D006301 3.2e-29 132.1 126 56.3
MD11G1242200 Malus domestica HOM05D005114 ORTHO05D006301 4.2e-29 131.7 126 56.3
Potri.009G168800 Populus trichocarpa HOM05D005114 ORTHO05D006301 5.4e-29 131.3 139 51.8
COL.COLO4_34318 Corchorus olitorius HOM05D005114 ORTHO05D006301 7.1e-29 131.0 136 53.7
Sabra09G0131100 Salix brachista HOM05D005114 ORTHO05D006301 9.3e-29 130.6 138 51.4
TAR376G1108 Trochodendron aralioides HOM05D005114 ORTHO05D006301 1.6e-28 129.8 126 54.8
CiPaw.05G093800 Carya illinoinensis HOM05D005114 ORTHO05D006301 2.7e-28 129.0 126 54.8
Haze_01976 Corylus avellana HOM05D005114 ORTHO05D006301 2.7e-28 129.0 124 57.3
Cfa005386 Carpinus fangiana HOM05D005114 ORTHO05D006301 3.5e-28 128.6 124 58.1
Gohir.D02G193600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 3.5e-28 128.6 139 52.5
EL10Ac9g21545 Beta vulgaris HOM05D005114 ORTHO05D006301 4.6e-28 128.3 139 51.1
Lsat_1_v5_gn_4_127800 Lactuca sativa HOM05D005114 ORTHO05D006301 4.6e-28 128.3 134 48.5
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 4.6e-28 128.3 125 57.6
SGA_v2.0_scaffold98G29308 Striga asiatica HOM05D005114 ORTHO05D006301 4.6e-28 128.3 138 52.9
Oeu025012.1 Olea europaea HOM05D005114 ORTHO05D006301 6.0e-28 127.9 136 53.7
Cpa.g.sc232.10 Carica papaya HOM05D005114 ORTHO05D006301 7.8e-28 127.5 142 54.2
CANSAT25G0809 Cannabis sativa HOM05D005114 ORTHO05D006301 1.0e-27 127.1 140 55.7
Manes.15G113200 Manihot esculenta HOM05D005114 ORTHO05D006301 1.0e-27 127.1 126 54.0
QL11p056532 Quercus lobata HOM05D005114 ORTHO05D006301 1.0e-27 127.1 126 55.6
Ah.01g009940 Amaranthus hybridus HOM05D005114 ORTHO05D006301 1.7e-27 126.3 130 55.4
ClCG02G010460 Citrullus lanatus HOM05D005114 ORTHO05D006301 2.3e-27 125.9 123 55.3
Oeu061898.1 Olea europaea HOM05D005114 ORTHO05D006301 2.3e-27 125.9 134 53.0
Duzib052G0751 Durio zibethinus HOM05D005114 ORTHO05D006301 3.9e-27 125.2 136 50.7
VMungo0647G0598 Vigna mungo HOM05D005114 ORTHO05D006301 3.9e-27 125.2 127 50.4
CsaV3_6G010060 Cucumis sativus L. HOM05D005114 ORTHO05D006301 8.7e-27 124.0 121 54.5
Sabra04G0139700 Salix brachista HOM05D005114 ORTHO05D006301 8.7e-27 124.0 119 55.5
Phvul.008G292700 Phaseolus vulgaris HOM05D005114 ORTHO05D006301 1.1e-26 123.6 127 48.8
Aqoxy6G01552 Aquilegia oxysepala HOM05D005114 ORTHO05D006301 1.5e-26 123.2 119 51.3
MELO3C013487.2 Cucumis melo HOM05D005114 ORTHO05D006301 2.5e-26 122.5 121 53.7
Ah.01g017650 Amaranthus hybridus HOM05D005114 ORTHO05D006301 3.3e-26 122.1 139 50.4
PGR142G2291 Punica granatum HOM05D005114 ORTHO05D006301 3.3e-26 122.1 123 50.4
TAR628G1615 Trochodendron aralioides HOM05D005114 ORTHO05D006301 3.3e-26 122.1 140 47.9
Ciclev10029408m.g Citrus clementina HOM05D005114 ORTHO05D006301 5.6e-26 121.3 130 55.4
Eucgr.I01537 Eucalyptus grandis HOM05D005114 ORTHO05D006301 5.6e-26 121.3 127 52.8
Sed0025941 Sechium edule HOM05D005114 ORTHO05D006301 7.3e-26 120.9 123 53.7
RcHm_v2.0_Chr6g0281051 Rosa chinensis HOM05D005114 ORTHO05D006301 1.3e-25 120.2 118 55.9
PSO761G0527 Papaver somniferum HOM05D005114 ORTHO05D006301 2.8e-25 119.0 121 48.8
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.8e-25 119.0 127 48.0
Nn6g31654 Nelumbo nucifera HOM05D005114 ORTHO05D006301 4.8e-25 118.2 126 50.0
FAN27G0013 Fragaria x ananassa HOM05D005114 ORTHO05D006301 1.1e-24 117.1 114 55.3
TWI31G1388 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 1.1e-24 117.1 148 50.0
PSO210G3276 Papaver somniferum HOM05D005114 ORTHO05D006301 1.4e-24 116.7 121 47.1
TAR381G0701 Trochodendron aralioides HOM05D005114 ORTHO05D006301 1.4e-24 116.7 126 49.2
Atru.chr5.3568 Acer truncatum HOM05D005114 ORTHO05D006301 1.8e-24 116.3 123 52.0
FvH4_2g16910 Fragaria vesca HOM05D005114 ORTHO05D006301 1.8e-24 116.3 132 51.5
FAN24G2001 Fragaria x ananassa HOM05D008916 ORTHO05D029537 1.8e-24 116.3 132 51.5
Glyma.02G311900 Glycine max HOM05D005114 ORTHO05D006301 1.8e-24 116.3 133 48.1
Rhsim05G0044800 Rhododendron simsii HOM05D005114 ORTHO05D006301 3.1e-24 115.5 123 50.4
CARHR243650 Cardamine hirsuta HOM05D005114 ORTHO05D006301 5.3e-24 114.8 134 45.5
Potri.004G207500 Populus trichocarpa HOM05D005114 ORTHO05D006301 6.9e-24 114.4 133 50.4
Sp7g33120 Schrenkiella parvula HOM05D005114 ORTHO05D006301 9.0e-24 114.0 133 44.4
Nitab4.5_0000783g0020 Nicotiana tabacum HOM05D005114 ORTHO05D006301 1.2e-23 113.6 156 42.3
THA.LOC104807409 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 1.2e-23 113.6 119 53.8
THA.LOC104819696 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 1.2e-23 113.6 122 52.5
AL7G15830 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 2.0e-23 112.8 135 45.2
Carub.0007s0497 Capsella rubella HOM05D005114 ORTHO05D006301 2.0e-23 112.8 134 44.8
Eucgr.H04995 Eucalyptus grandis HOM05D005114 ORTHO05D006301 2.6e-23 112.5 143 49.0
CSS0034975 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 5.8e-23 111.3 113 51.3
HanXRQChr15g0479801 Helianthus annuus HOM05D005114 ORTHO05D006301 5.8e-23 111.3 134 46.3
ClCG02G003320 Citrullus lanatus HOM05D005114 ORTHO05D006301 7.6e-23 110.9 135 45.9
Lsat_1_v5_gn_8_120760 Lactuca sativa HOM05D005114 ORTHO05D006301 7.6e-23 110.9 132 44.7
AT4G35320 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 9.9e-23 110.5 135 44.4
Sc08g0002110 Simmondsia chinensis HOM05D005114 ORTHO05D006301 9.9e-23 110.5 122 48.4
MBI04_g33967_MAGBIO Magnolia biondii HOM05D005114 ORTHO05D006301 1.3e-22 110.2 126 50.8
BolC1t00348H Brassica oleracea HOM05D005114 ORTHO05D006301 2.2e-22 109.4 134 44.8
CDE06G2378 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 2.9e-22 109.0 111 47.7
FAN15G0896 Fragaria x ananassa HOM05D005114 ORTHO05D006301 2.9e-22 109.0 114 53.5
Thhalv10026488m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 4.9e-22 108.2 104 51.0
LjContig00081g0003123 Lotus japonicus HOM05D005114 ORTHO05D006301 4.9e-22 108.2 130 46.9
BraA01t00308Z Brassica rapa HOM05D005114 ORTHO05D006301 8.4e-22 107.5 134 44.0
A01p03230 Brassica napus HOM05D005114 ORTHO05D006301 1.1e-21 107.1 134 44.0
CiPaw.06G114800 Carya illinoinensis HOM05D005114 ORTHO05D006301 1.1e-21 107.1 115 47.8
PGR042G3856 Punica granatum HOM05D005114 ORTHO05D006301 1.9e-21 106.3 138 46.4
BcaNung00605 Brassica carinata HOM05D005114 ORTHO05D006301 2.4e-21 105.9 136 44.1
C01p03580 Brassica napus HOM05D005114 ORTHO05D006301 2.4e-21 105.9 136 44.1
TWI75G1159 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 2.4e-21 105.9 125 52.0
Dinv41866 Davidia involucrata HOM05D005114 ORTHO05D006301 9.3e-21 104.0 147 44.2
DCAR_006992 Daucus carota HOM05D005114 ORTHO05D006301 2.1e-20 102.8 109 48.6
Aa31LG2G14950 Aethionema arabicum HOM05D005114 ORTHO05D006301 4.6e-20 101.7 131 42.7
Solyc01g112260.4 Solanum lycopersicum HOM05D005114 ORTHO05D006301 6.0e-20 101.3 152 38.2
CDE07G1352 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 7.9e-20 100.9 112 46.4
HanXRQChr16g0528291 Helianthus annuus HOM05D005114 ORTHO05D006301 7.9e-20 100.9 134 44.0
Sed0004058 Sechium edule HOM05D005114 ORTHO05D006301 1.8e-19 99.8 136 43.4
Sopen01g054350 Solanum pennellii HOM05D005114 ORTHO05D006301 1.8e-19 99.8 152 37.5
Os02g0715300 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 3.0e-19 99.0 100 50.0
CSS0049408 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 3.3e-18 95.5 119 48.7
Glyma.14G000700 Glycine max HOM05D005114 ORTHO05D006301 4.3e-18 95.1 123 43.9
HPP92_018957 Vanilla planifolia HOM05D005114 ORTHO05D006301 5.6e-18 94.7 119 47.9
PSO675G3082 Papaver somniferum HOM05D005114 ORTHO05D006301 7.4e-18 94.4 122 41.8
PSO541G2758 Papaver somniferum HOM05D005114 ORTHO05D006301 1.3e-17 93.6 123 41.5
AUR62013183 Chenopodium quinoa HOM05D005114 ORTHO05D006301 4.8e-17 91.7 73 56.2
Zm00001eb252690 Zea mays HOM05D005114 ORTHO05D006301 8.1e-17 90.9 104 47.1
MELO3C015705.2 Cucumis melo HOM05D005114 ORTHO05D006301 3.1e-16 89.0 136 44.9
A07p03740 Brassica napus HOM05D005114 ORTHO05D006301 6.9e-16 87.8 129 44.2
Medtr5g099250 Medicago truncatula HOM05D005114 ORTHO05D006301 1.2e-15 87.0 131 41.2
BraA07t28162Z Brassica rapa HOM05D005114 ORTHO05D006301 1.5e-15 86.7 129 44.2
Lj5P171T50 Lonicera japonica HOM05D005114 ORTHO05D006301 1.5e-15 86.7 73 52.1
BcaC06g36254 Brassica carinata HOM05D005114 ORTHO05D006301 2.0e-15 86.3 129 43.4
C07p05980 Brassica napus HOM05D005114 ORTHO05D006301 2.0e-15 86.3 129 43.4
BolC7t41007H Brassica oleracea HOM05D005114 ORTHO05D006301 2.0e-15 86.3 129 43.4
ATR0605G119 Amborella trichopoda HOM05D005114 ORTHO05D006301 2.6e-15 85.9 118 45.8
AT2G17300 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 7.6e-15 84.3 128 43.8
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 7.6e-15 84.3 66 53.0
BcaB03g16485 Brassica carinata HOM05D005114 ORTHO05D006301 1.3e-14 83.6 125 43.2
HanXRQChr14g0449881 Helianthus annuus HOM05D005114 ORTHO05D006301 1.7e-14 83.2 134 42.5
CAN.G1645.5 Capsicum annuum HOM05D005114 ORTHO05D006301 2.2e-14 82.8 98 43.9
HPP92_019672 Vanilla planifolia HOM05D005114 ORTHO05D006301 3.8e-14 82.0 122 41.0
CsaV3_7G002020 Cucumis sativus L. HOM05D005114 ORTHO05D006301 6.4e-14 81.3 132 42.4
TPR.G18628 Trifolium pratense HOM05D005114 ORTHO05D006301 1.1e-13 80.5 86 50.0
Os08g0511400 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 1.9e-13 79.7 103 40.8
Carub.0003s3126 Capsella rubella HOM05D005114 ORTHO05D006301 3.2e-13 79.0 130 41.5
Thhalv10023149m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 4.2e-13 78.6 134 44.0
AL3G50180 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 4.6e-12 75.1 128 42.2
HPP92_017809 Vanilla planifolia HOM05D005114 ORTHO05D006301 1.0e-11 73.9 112 37.5
Ca_06504_v3 Cicer arietinum L. HOM05D005114 ORTHO05D006301 8.7e-11 70.9 117 39.3
Lalb_Chr10g0107691 Lupinus albus HOM05D005114 ORTHO05D006301 9.6e-10 67.4 109 41.3
CARHR107410 Cardamine hirsuta HOM05D005114 ORTHO05D006301 4.8e-09 65.1 127 40.2
Zm00001eb188970 Zea mays HOM05D005114 ORTHO05D006301 4.8e-09 65.1 99 41.4
Lju1609C0T0 Lonicera japonica HOM05D005114 ORTHO05D006301 8.2e-09 64.3 52 51.9
Gohir.A12G012850 Gossypium hirsutum HOM05D005114 ORTHO05D006301 3.4e-07 58.9 38 63.2


User provided reference genes

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