Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9956 Utricularia gibba HOM05D002166 ORTHO05D002634 7.7e-86 320.5 164 100.0
unitig_749.g13964 Utricularia gibba HOM05D002166 ORTHO05D002634 4.3e-44 181.8 144 67.4
MSTRG.14434 Avicennia marina HOM05D002166 ORTHO05D002634 1.6e-22 110.2 134 52.2
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 3.0e-21 105.9 140 48.6
SGA_v2.0_scaffold18G08536 Striga asiatica HOM05D002166 ORTHO05D002634 3.4e-17 92.4 136 50.0
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 4.6e-14 82.0 138 42.8
Cc05_g13700 Coffea canephora HOM05D002166 ORTHO05D002634 3.0e-13 79.3 146 44.5
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 5.6e-12 75.1 146 42.5
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 5.2e-10 68.6 125 40.8
Nitab4.5_0011129g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 5.2e-10 68.6 139 38.8
Solyc07g064580.3 Solanum lycopersicum HOM05D002166 ORTHO05D002634 1.2e-09 67.4 141 41.8
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 1.2e-09 67.4 141 41.1
PGSC0003DMG400022320 Solanum tuberosum HOM05D002166 ORTHO05D002634 1.2e-09 67.4 141 42.6
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 1.5e-09 67.0 127 44.9
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 2.0e-09 66.6 128 43.0
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 2.0e-09 66.6 147 39.5
Actinidia36941 Actinidia chinensis HOM05D002166 ORTHO05D002634 9.9e-09 64.3 121 43.0
HanXRQChr05g0159381 Helianthus annuus HOM05D002166 ORTHO05D002634 9.9e-09 64.3 144 36.1
Sed0016610 Sechium edule HOM05D002166 ORTHO05D002634 1.3e-08 63.9 139 38.8
Gohir.D11G289500 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.7e-08 63.5 72 45.8
Gorai.007G313300 Gossypium raimondii HOM05D002166 ORTHO05D002634 1.7e-08 63.5 72 45.8
CsaV3_7G021790 Cucumis sativus L. HOM05D002166 ORTHO05D002634 2.9e-08 62.8 151 35.8
Lsat_1_v5_gn_5_4021 Lactuca sativa HOM05D002166 ORTHO05D002634 2.9e-08 62.8 135 37.0
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 4.9e-08 62.0 146 37.0
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 6.4e-08 61.6 125 40.8
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 8.4e-08 61.2 133 39.8
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 1.1e-07 60.8 107 40.2
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 1.1e-07 60.8 106 40.6
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 2.4e-07 59.7 121 36.4
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 2.4e-07 59.7 123 39.8
MSTRG.6918 Avicennia marina HOM05D002166 ORTHO05D002634 4.2e-07 58.9 136 40.4
Cfa020346 Carpinus fangiana HOM05D002166 ORTHO05D002634 4.2e-07 58.9 110 42.7
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 4.2e-07 58.9 110 44.5
Actinidia05096 Actinidia chinensis HOM05D002166 ORTHO05D002634 5.4e-07 58.5 86 45.3
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 5.4e-07 58.5 121 38.0
Gohir.A11G278700 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.4e-07 58.5 72 41.7
CAN.G1404.1 Capsicum annuum HOM05D002166 ORTHO05D002634 7.1e-07 58.2 95 46.3
Sed0003386 Sechium edule HOM05D002166 ORTHO05D002634 7.1e-07 58.2 144 38.2
HanXRQChr08g0233861 Helianthus annuus HOM05D002166 ORTHO05D002634 1.2e-06 57.4 145 34.5
MD11G1218700 Malus domestica HOM05D002166 ORTHO05D002634 1.2e-06 57.4 129 38.8
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 1.2e-06 57.4 141 36.9
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 1.6e-06 57.0 126 35.7
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 2.1e-06 56.6 127 34.6
TWI38G2284 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 2.1e-06 56.6 137 37.2
AL1G58330 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 2.7e-06 56.2 129 34.9
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 2.7e-06 56.2 110 41.8
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 3.5e-06 55.8 115 45.2
Glyma.18G097100 Glycine max HOM05D002166 ORTHO05D002634 3.5e-06 55.8 156 35.3
LjContig00272g0027317 Lotus japonicus HOM05D002166 ORTHO05D002634 3.5e-06 55.8 128 41.4
BcaB07g33506 Brassica carinata HOM05D002166 ORTHO05D002634 4.6e-06 55.5 172 34.9
CsaV3_3G005040 Cucumis sativus L. HOM05D002166 ORTHO05D002634 4.6e-06 55.5 148 37.8
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 4.6e-06 55.5 158 35.4
PGSC0003DMG400027878 Solanum tuberosum HOM05D002166 ORTHO05D002634 4.6e-06 55.5 114 40.4
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 4.6e-06 55.5 121 40.5
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 6.0e-06 55.1 128 36.7
Actinidia10734 Actinidia chinensis HOM05D002166 ORTHO05D002634 7.8e-06 54.7 107 40.2
Actinidia35343 Actinidia chinensis HOM05D002166 ORTHO05D002634 7.8e-06 54.7 100 41.0
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 7.8e-06 54.7 115 43.5
ClCG09G010790 Citrullus lanatus HOM05D002166 ORTHO05D002634 7.8e-06 54.7 135 38.5


User provided reference genes

Program Settings