Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 1.6e-305 1052.0 528 100.0
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 3.3e-162 575.9 501 62.3
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 4.3e-162 575.5 520 61.7
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 2.0e-159 566.6 502 60.8
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 5.2e-144 515.4 518 55.8
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 1.2e-143 514.2 518 54.8
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 5.8e-143 511.9 507 54.6
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 1.4e-141 507.3 507 55.0
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 3.5e-140 502.7 498 55.2
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 1.0e-139 501.1 493 55.6
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 8.6e-139 498.0 512 55.3
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 8.6e-139 498.0 508 53.7
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 8.6e-139 498.0 504 54.6
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 1.1e-138 497.7 503 53.3
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.2e-137 494.2 522 52.3
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 4.7e-137 492.3 495 55.2
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 1.1e-136 491.1 516 52.3
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.1e-136 491.1 513 51.5
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 4.0e-136 489.2 508 52.4
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 6.8e-136 488.4 522 51.7
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 1.2e-135 487.6 507 52.5
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 3.4e-135 486.1 510 53.1
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 7.6e-135 485.0 514 49.8
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 6.4e-134 481.9 515 53.6
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 8.4e-134 481.5 508 53.0
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 1.9e-133 480.3 504 54.2
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.9e-133 480.3 497 53.5
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 1.9e-133 480.3 512 53.5
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 4.2e-133 479.2 510 51.0
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 5.4e-133 478.8 496 54.0
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 7.1e-133 478.4 506 51.2
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 2.1e-132 476.9 500 53.4
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 6.0e-132 475.3 505 52.3
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 7.8e-132 474.9 529 49.1
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 1.3e-131 474.2 506 52.6
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 1.7e-131 473.8 506 51.8
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 3.0e-131 473.0 514 52.5
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.6e-131 471.9 488 53.3
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.5e-130 470.7 492 53.9
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 2.5e-130 469.9 497 52.7
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.3e-130 469.5 511 51.3
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 3.3e-130 469.5 521 50.3
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 7.3e-130 468.4 490 52.2
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 9.6e-130 468.0 511 52.8
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 1.2e-129 467.6 507 50.1
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 2.1e-129 466.8 505 53.7
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 2.1e-129 466.8 516 50.8
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 2.8e-129 466.5 498 52.4
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 2.8e-129 466.5 505 50.3
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 3.6e-129 466.1 579 48.4
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 4.7e-129 465.7 547 48.4
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 4.7e-129 465.7 475 52.2
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 8.1e-129 464.9 578 47.1
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 1.1e-128 464.5 470 54.9
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 3.1e-128 463.0 499 52.7
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 5.3e-128 462.2 521 49.7
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 1.5e-127 460.7 498 52.8
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 2.6e-127 459.9 469 53.9
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 2.6e-127 459.9 530 49.2
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 3.4e-127 459.5 509 52.1
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 3.4e-127 459.5 503 53.1
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 4.4e-127 459.1 530 49.2
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 7.6e-127 458.4 539 49.0
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 9.9e-127 458.0 490 50.4
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 1.3e-126 457.6 501 52.1
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.3e-126 457.6 494 53.0
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.7e-126 457.2 595 47.2
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 2.2e-126 456.8 521 49.5
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 2.2e-126 456.8 509 52.8
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 2.2e-126 456.8 500 51.2
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 3.8e-126 456.1 523 48.0
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 3.8e-126 456.1 505 48.9
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 4.9e-126 455.7 504 51.6
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 6.4e-126 455.3 499 48.7
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 6.4e-126 455.3 498 49.2
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 6.4e-126 455.3 499 49.5
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.4e-125 454.1 504 52.0
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 1.4e-125 454.1 503 52.9
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 2.4e-125 453.4 610 44.8
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 3.2e-125 453.0 578 47.2
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 3.2e-125 453.0 500 52.4
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 4.2e-125 452.6 470 52.6
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 7.1e-125 451.8 494 51.0
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 9.3e-125 451.4 498 48.8
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.6e-124 450.7 593 47.0
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.7e-124 449.9 484 52.1
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 4.6e-124 449.1 500 51.0
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.3e-123 447.6 486 51.2
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 1.7e-123 447.2 505 48.3
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.7e-123 447.2 576 46.4
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 3.0e-123 446.4 505 47.9
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.1e-123 445.7 504 51.8
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 6.6e-123 445.3 497 48.5
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 1.3e-121 441.0 499 48.5
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 1.6e-121 440.7 503 49.7
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 6.2e-121 438.7 496 51.8
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 1.4e-120 437.6 499 48.1
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.8e-120 437.2 463 51.4
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 2.4e-120 436.8 519 47.6
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 4.0e-120 436.0 495 50.5
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 3.4e-119 433.0 501 50.5
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 1.3e-118 431.0 504 48.8
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.7e-118 430.6 490 49.6
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 2.9e-118 429.9 499 47.9
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 2.9e-118 429.9 519 48.7
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 6.4e-118 428.7 499 47.7
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 6.4e-118 428.7 503 48.3
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 8.4e-118 428.3 486 49.8
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.4e-117 427.6 531 47.3
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 1.9e-117 427.2 503 47.3
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 6.0e-116 422.2 516 47.1
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.0e-115 421.4 507 49.3
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 1.3e-115 421.0 505 46.9
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 1.3e-115 421.0 512 46.9
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 2.3e-115 420.2 499 46.9
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.5e-114 416.8 535 46.9
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 2.5e-114 416.8 542 45.9
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.3e-113 414.5 501 48.1
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 4.8e-113 412.5 503 47.5
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 6.2e-113 412.1 506 46.2
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 1.4e-112 411.0 497 48.1
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 2.6e-111 406.8 517 46.6
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 2.2e-110 403.7 504 48.0
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 2.9e-110 403.3 578 44.1
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.9e-109 400.6 506 46.8
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 1.2e-108 397.9 492 46.5
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 1.3e-107 394.4 522 45.6
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 1.8e-107 394.0 510 44.9
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 5.6e-106 389.0 463 47.7
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 2.8e-105 386.7 526 45.6
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 1.8e-104 384.0 391 53.7
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 6.1e-100 369.0 514 45.7
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 5.7e-98 362.5 530 42.3
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.2e-95 354.8 373 53.4
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 8.8e-91 338.6 514 41.6
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 2.0e-82 310.8 504 39.5
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 5.7e-82 309.3 304 56.2
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.4e-80 304.7 341 49.0
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 9.1e-80 302.0 322 51.6
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.2e-79 301.6 541 39.2
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 7.7e-79 298.9 505 37.6
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 1.3e-78 298.1 497 40.6
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.9e-78 297.0 507 37.3
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 5.0e-78 296.2 497 38.0
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.7e-76 289.7 527 36.4
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 4.4e-74 283.1 494 39.1
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 1.1e-72 278.5 508 36.8
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.6e-71 274.6 492 38.4
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 7.7e-71 272.3 506 38.1
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 1.8e-67 261.2 349 42.4
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 5.2e-67 259.6 584 33.9
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.2e-66 258.5 459 37.7
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 5.9e-63 246.1 337 44.2
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 3.8e-62 243.4 494 34.8
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 3.4e-58 230.3 364 40.1
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 3.7e-57 226.9 336 39.3
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 5.0e-54 216.5 304 40.1
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 4.9e-25 120.2 76 75.0
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 7.8e-23 112.8 149 46.3
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 1.2e-15 89.0 137 39.4
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 3.5e-15 87.4 65 63.1
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 8.7e-14 82.8 61 60.7
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 5.6e-13 80.1 143 37.8
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 3.6e-12 77.4 124 39.5
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.9e-09 67.8 105 38.1
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 2.1e-07 61.6 56 51.8


User provided reference genes

Program Settings