Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 3.8e-128 461.5 222 100.0
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 6.3e-75 284.6 231 63.2
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 5.9e-73 278.1 223 63.7
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.7e-72 276.6 201 67.7
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.1e-71 273.9 250 58.4
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.5e-71 272.7 204 66.7
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 3.2e-71 272.3 196 67.9
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 7.2e-71 271.2 204 66.2
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.2e-71 271.2 247 59.1
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 9.4e-71 270.8 226 62.4
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.2e-70 270.4 212 65.1
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.6e-70 270.0 228 62.3
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.6e-70 270.0 252 57.9
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.6e-70 270.0 199 65.3
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.6e-70 270.0 196 67.3
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.1e-70 269.6 228 61.8
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 2.1e-70 269.6 223 63.2
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 6.1e-70 268.1 195 66.7
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 6.1e-70 268.1 220 63.2
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 8.0e-70 267.7 196 66.3
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 1.0e-69 267.3 227 61.2
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.0e-69 267.3 196 66.3
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.4e-69 266.9 206 64.6
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.4e-69 266.9 198 64.6
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.8e-69 266.5 202 65.3
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 3.0e-69 265.8 245 58.8
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 3.0e-69 265.8 221 61.1
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 3.0e-69 265.8 202 66.3
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 4.0e-69 265.4 195 66.2
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 4.0e-69 265.4 176 69.9
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 5.2e-69 265.0 196 65.8
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 5.2e-69 265.0 195 66.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 6.8e-69 264.6 221 61.1
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 6.8e-69 264.6 197 66.0
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 8.8e-69 264.2 194 66.5
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 8.8e-69 264.2 199 64.8
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.2e-68 263.8 202 64.9
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.5e-68 263.5 248 55.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 1.5e-68 263.5 203 64.0
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.0e-68 263.1 176 70.5
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 2.0e-68 263.1 202 64.4
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 2.6e-68 262.7 197 64.0
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.6e-68 262.7 197 64.0
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 3.4e-68 262.3 199 65.3
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 3.4e-68 262.3 196 64.8
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 3.4e-68 262.3 198 65.7
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 3.4e-68 262.3 176 69.3
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 4.4e-68 261.9 231 58.4
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 7.5e-68 261.2 195 65.1
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.3e-67 260.4 196 64.3
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.3e-67 260.4 221 57.5
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.7e-67 260.0 223 60.1
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.2e-67 259.6 203 62.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 2.2e-67 259.6 197 63.5
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.2e-67 259.6 223 60.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.8e-67 259.2 195 64.6
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 2.8e-67 259.2 229 58.1
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 3.7e-67 258.8 249 57.4
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 3.7e-67 258.8 218 60.1
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 4.8e-67 258.5 198 62.6
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 6.3e-67 258.1 203 62.6
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 6.3e-67 258.1 196 64.8
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.1e-66 257.3 220 60.9
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.4e-66 256.9 195 65.1
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.8e-66 256.5 211 60.7
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 9.1e-66 254.2 203 62.6
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.2e-65 253.8 263 54.0
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 1.2e-65 253.8 176 67.6
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 3.5e-65 252.3 195 62.6
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.0e-64 250.8 196 63.3
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.3e-64 250.4 181 66.3
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 2.5e-63 246.1 176 65.9
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 3.2e-63 245.7 248 54.8
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.5e-63 245.0 206 58.7
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.6e-62 243.4 194 62.4
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.6e-62 243.4 193 64.2
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 8.0e-62 241.1 182 62.1
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.0e-61 240.7 172 66.3
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.8e-61 240.0 208 59.1
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.8e-61 237.7 176 65.3
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.0e-60 236.5 191 60.7
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 1.3e-59 233.8 236 56.4
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.8e-59 232.6 168 67.3
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 7.0e-58 228.0 189 63.0
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.9e-57 224.9 186 60.8
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.9e-56 222.6 215 54.0
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.3e-55 218.8 227 52.4
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 5.6e-55 218.4 168 58.9
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 7.3e-55 218.0 199 56.8
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.6e-54 216.9 226 51.3
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 5.2e-53 211.8 119 82.4
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 9.8e-52 207.6 148 66.2
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 3.2e-50 202.6 211 50.7
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 5.9e-49 198.4 167 62.3
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 3.0e-48 196.1 173 59.0
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.0e-48 195.3 198 54.0
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 7.0e-42 174.9 170 51.2
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 3.5e-41 172.6 200 48.5
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 2.8e-38 162.9 136 61.8
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 3.4e-36 156.0 184 46.7
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 2.4e-34 149.8 173 43.4
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.9e-32 142.5 149 45.0
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.3e-31 138.3 208 41.8
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.5e-31 137.9 208 41.3
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.7e-27 127.1 102 59.8
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 6.6e-24 115.2 71 77.5
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.5e-23 114.0 102 55.9
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 1.1e-21 107.8 96 57.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 7.8e-17 91.7 56 71.4
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 7.6e-12 75.1 161 33.5


User provided reference genes

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