Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 4.9e-179 630.9 305 100.0
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 1.2e-132 476.9 250 92.0
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 2.1e-105 386.3 253 73.5
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 3.9e-99 365.5 258 71.3
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 1.5e-98 363.6 253 70.8
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 9.8e-95 350.9 251 69.3
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 1.0e-91 340.9 257 66.1
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.7e-78 297.0 262 59.2
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 1.3e-73 280.8 260 54.6
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 3.6e-73 279.3 259 54.4
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 3.6e-73 279.3 259 54.4
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 1.8e-72 276.9 266 53.8
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 1.8e-72 276.9 270 52.6
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 2.4e-72 276.6 269 53.2
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 1.2e-71 274.2 262 54.6
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 7.6e-71 271.6 256 53.9
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 1.9e-69 266.9 250 56.4
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 6.0e-68 261.9 259 52.5
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 6.0e-68 261.9 252 51.2
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 6.7e-67 258.5 260 51.2
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 1.5e-66 257.3 256 50.8
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 1.5e-66 257.3 258 51.9
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 5.6e-66 255.4 257 51.4
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 7.4e-66 255.0 258 50.4
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.3e-65 254.2 260 48.8
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 3.7e-65 252.7 261 49.4
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 3.7e-65 252.7 245 51.8
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 8.1e-65 251.5 250 49.2
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 1.1e-64 251.1 257 50.2
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 1.1e-64 251.1 250 54.0
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 1.4e-64 250.8 262 50.4
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 4.0e-64 249.2 252 50.8
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 5.3e-64 248.8 248 50.4
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 6.9e-64 248.4 255 49.8
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 6.9e-64 248.4 258 50.4
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 6.9e-64 248.4 246 52.0
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 1.5e-63 247.3 259 49.8
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.5e-63 247.3 263 49.4
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 1.5e-63 247.3 259 49.4
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 2.6e-63 246.5 261 47.1
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 2.6e-63 246.5 254 50.0
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 5.8e-63 245.4 257 49.0
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 5.8e-63 245.4 262 50.8
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 9.9e-63 244.6 259 49.4
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 1.3e-62 244.2 255 48.2
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 1.3e-62 244.2 260 48.1
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 1.7e-62 243.8 248 49.2
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 2.9e-62 243.0 266 48.1
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 3.8e-62 242.7 257 48.6
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 3.8e-62 242.7 257 48.6
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 3.8e-62 242.7 257 48.6
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 6.4e-62 241.9 258 48.1
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 8.4e-62 241.5 257 48.2
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 1.4e-61 240.7 260 48.1
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 3.2e-61 239.6 253 49.4
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 4.2e-61 239.2 259 46.7
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 7.1e-61 238.4 263 46.8
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 7.1e-61 238.4 263 46.8
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 7.1e-61 238.4 263 46.8
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 2.7e-60 236.5 264 46.6
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 2.7e-60 236.5 267 46.1
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 3.5e-60 236.1 253 47.4
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 3.5e-60 236.1 252 49.2
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 4.6e-60 235.7 265 46.8
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 6.0e-60 235.3 262 47.3
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 7.9e-60 235.0 262 47.3
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 1.0e-59 234.6 252 49.6
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 2.3e-59 233.4 247 51.0
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 2.3e-59 233.4 251 50.2
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 3.9e-59 232.6 265 45.3
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 8.7e-59 231.5 263 45.2
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 2.5e-58 229.9 248 48.4
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 2.5e-58 229.9 260 46.5
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 5.6e-58 228.8 263 45.2
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 2.1e-57 226.9 265 47.5
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 2.8e-57 226.5 262 44.3
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 4.8e-57 225.7 271 48.0
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 4.8e-57 225.7 271 48.0
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.1e-56 224.6 246 49.6
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 1.1e-56 224.6 252 45.2
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 4.0e-56 222.6 267 43.8
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 3.4e-55 219.5 251 43.8
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 1.0e-54 218.0 253 45.8
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 3.8e-54 216.1 258 46.5
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 4.9e-54 215.7 254 42.5
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 4.2e-53 212.6 244 47.1
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 7.1e-53 211.8 250 47.2
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 4.6e-52 209.1 233 47.6
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 1.0e-51 208.0 255 44.3
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 6.7e-51 205.3 258 43.8
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 1.4e-48 197.6 180 55.6
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 2.4e-48 196.8 252 43.3
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 5.3e-48 195.7 179 54.7
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 9.0e-48 194.9 179 54.2
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 5.7e-42 175.6 164 54.9
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 5.9e-39 165.6 271 37.6
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 2.2e-38 163.7 247 39.3
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 2.5e-37 160.2 263 36.5
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 4.8e-33 146.0 157 45.2
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 1.5e-31 141.0 128 57.0
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.1e-28 130.6 139 51.8
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 3.3e-26 123.2 183 40.4
MSTRG.25314 Avicennia marina HOM05D006114 ORTHO05D007609 1.1e-21 108.2 72 72.2
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 3.2e-21 106.7 99 55.6
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 2.1e-20 104.0 112 53.6
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 6.3e-17 92.4 137 48.2
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 8.2e-17 92.0 92 48.9
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 1.8e-16 90.9 90 48.9
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 1.0e-14 85.1 93 49.5
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.1e-13 81.6 67 50.7
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 1.5e-13 81.3 88 46.6
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 3.2e-13 80.1 229 27.5
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 1.6e-12 77.8 108 47.2
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 2.6e-10 70.5 64 56.2
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 1.7e-09 67.8 133 33.1
Pp3c16_10660 Physcomitrium patens HOM05D002809 ORTHO05D012113 3.7e-09 66.6 234 26.1
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 6.3e-09 65.9 141 31.9
Mapoly0186s0014 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.1e-08 65.1 149 29.5
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 4.1e-08 63.2 136 30.9
ATR0561G071 Amborella trichopoda HOM05D005977 ORTHO05D004563 9.1e-08 62.0 143 29.4
SMO296G0037 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 9.1e-08 62.0 148 29.7
AT1G30950 Arabidopsis thaliana HOM05D005977 ORTHO05D007546 1.2e-07 61.6 204 27.9
Carub.0001s2936 Capsella rubella HOM05D005977 ORTHO05D007546 1.2e-07 61.6 205 28.3
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 1.6e-07 61.2 147 29.9
SMO367G1056 Selaginella moellendorffii HOM05D002809 ORTHO05D030467 1.6e-07 61.2 143 32.9
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 1.6e-07 61.2 60 43.3
ATR1153G074 Amborella trichopoda HOM05D007423 ORTHO05D009091 2.0e-07 60.8 141 29.1
SalBow7G3210 Salvia bowleyana HOM05D000007 ORTHO05D000521 2.7e-07 60.5 184 30.4
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 4.5e-07 59.7 156 30.1
Sp1g26810 Schrenkiella parvula HOM05D005977 ORTHO05D007546 4.5e-07 59.7 204 27.5
Os01g0923900 Oryza sativa ssp. japonica HOM05D002809 ORTHO05D004563 5.9e-07 59.3 151 29.1
A08p10880 Brassica napus HOM05D005977 ORTHO05D007546 7.7e-07 58.9 207 27.1
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 7.7e-07 58.9 60 41.7
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 7.7e-07 58.9 45 53.3
BcaC07g37791 Brassica carinata HOM05D005977 ORTHO05D007546 1.0e-06 58.5 229 26.2
BolC8t48184H Brassica oleracea HOM05D005977 ORTHO05D007546 1.0e-06 58.5 229 26.2
BraA08t33083Z Brassica rapa HOM05D005977 ORTHO05D007546 1.0e-06 58.5 207 27.1
PGR042G0935 Punica granatum HOM05D005977 ORTHO05D007546 1.0e-06 58.5 222 29.3
AL1G45360 Arabidopsis lyrata HOM05D005977 ORTHO05D007546 1.3e-06 58.2 205 27.8
CARHR030490 Cardamine hirsuta HOM05D005977 ORTHO05D007546 1.3e-06 58.2 204 27.0
Hma1.2p1_0448F.1_g154860 Hydrangea macrophylla HOM05D004302 ORTHO05D004939 1.3e-06 58.2 148 30.4
Pp3c10_20160 Physcomitrium patens HOM05D003005 ORTHO05D004563 1.3e-06 58.2 158 27.8
BcaB04g18196 Brassica carinata HOM05D005977 ORTHO05D007546 2.3e-06 57.4 207 27.1
Sc14g0009090 Simmondsia chinensis HOM05D002809 ORTHO05D004563 2.9e-06 57.0 161 27.3
Actinidia30638 Actinidia chinensis HOM05D002809 ORTHO05D004563 3.8e-06 56.6 150 27.3
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.8e-06 56.6 143 29.4
Oeu031249.1 Olea europaea HOM05D000007 ORTHO05D000039 3.8e-06 56.6 139 35.3
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 3.8e-06 56.6 150 29.3
Zm00001eb364210 Zea mays HOM05D002809 ORTHO05D004563 3.8e-06 56.6 159 27.7
BolC4t27670H Brassica oleracea HOM05D000171 ORTHO05D000101 5.0e-06 56.2 139 31.7
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 8.6e-06 55.5 141 24.8
Lj1P1149T39 Lonicera japonica HOM05D005977 ORTHO05D007546 8.6e-06 55.5 179 25.1


User provided reference genes

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