Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9898 Utricularia gibba HOM05D000883 ORTHO05D008274 3.9e-41 171.0 85 100.0
SalBow7G2168 Salvia bowleyana HOM05D001639 ORTHO05D008274 3.8e-20 101.3 66 68.2
SalBow7G3935 Salvia bowleyana HOM05D001639 ORTHO05D008274 3.8e-20 101.3 66 68.2
TAR381G0772 Trochodendron aralioides HOM05D001639 ORTHO05D008274 3.8e-20 101.3 78 60.3
Actinidia01148 Actinidia chinensis HOM05D001639 ORTHO05D008274 1.1e-19 99.8 67 67.2
Migut.C00995 Erythranthe guttata HOM05D001639 ORTHO05D008274 1.4e-19 99.4 66 68.2
SGA_v2.0_scaffold48G17996 Striga asiatica HOM05D001639 ORTHO05D008274 1.4e-19 99.4 85 57.6
THA.LOC104798867 Tarenaya hassleriana HOM05D001639 ORTHO05D008274 1.9e-19 99.0 68 63.2
Aa31LG9G12280 Aethionema arabicum HOM05D000189 ORTHO05D000474 2.5e-19 98.6 69 63.8
MSTRG.1084 Avicennia marina HOM05D001639 ORTHO05D008274 2.5e-19 98.6 66 68.2
VMungo0464G0855 Vigna mungo HOM05D000883 ORTHO05D008274 2.5e-19 98.6 79 57.0
AL8G19740 Arabidopsis lyrata HOM05D000883 ORTHO05D008274 3.2e-19 98.2 69 63.8
ClCG08G006600 Citrullus lanatus HOM05D000883 ORTHO05D008274 3.2e-19 98.2 68 63.2
Phvul.004G099800 Phaseolus vulgaris HOM05D000883 ORTHO05D008274 3.2e-19 98.2 79 55.7
MELO3C008392.2 Cucumis melo HOM05D000883 ORTHO05D008274 4.2e-19 97.8 68 63.2
CsaV3_6G029660 Cucumis sativus L. HOM05D000883 ORTHO05D008274 4.2e-19 97.8 68 63.2
Thhalv10018646m.g Eutrema salsugineum HOM05D000883 ORTHO05D008274 5.5e-19 97.4 66 66.7
Sed0024209 Sechium edule HOM05D000883 ORTHO05D008274 5.5e-19 97.4 68 63.2
Cc10_g14130 Coffea canephora HOM05D001639 ORTHO05D008274 7.1e-19 97.1 66 66.7
Oeu014480.1 Olea europaea HOM05D001639 ORTHO05D008274 7.1e-19 97.1 65 64.6
TWI32G0210 Tripterygium wilfordii HOM05D001639 ORTHO05D008274 7.1e-19 97.1 69 62.3
COL.COLO4_08290 Corchorus olitorius HOM05D001639 ORTHO05D008274 9.3e-19 96.7 64 70.3
Cfa018342 Carpinus fangiana HOM05D001639 ORTHO05D008274 1.2e-18 96.3 79 57.0
Nitab4.5_0000299g0290 Nicotiana tabacum HOM05D001639 ORTHO05D008274 1.6e-18 95.9 65 66.2
Peaxi162Scf00263g00927 Petunia axillaris HOM05D001639 ORTHO05D008274 1.6e-18 95.9 65 66.2
Ciclev10001437m.g Citrus clementina HOM05D000883 ORTHO05D008274 2.1e-18 95.5 66 65.2
PSO541G2792 Papaver somniferum HOM05D001639 ORTHO05D008274 2.1e-18 95.5 75 54.7
Haze_17732 Corylus avellana HOM05D001639 ORTHO05D008274 2.7e-18 95.1 66 62.1
Sc02g0004300 Simmondsia chinensis HOM05D001639 ORTHO05D008274 2.7e-18 95.1 66 63.6
CSS0033416 Camellia sinensis var. sinensis HOM05D001639 ORTHO05D008274 3.5e-18 94.7 69 59.4
CSS0048578 Camellia sinensis var. sinensis HOM05D001639 ORTHO05D008274 3.5e-18 94.7 69 59.4
CAN.G715.7 Capsicum annuum HOM05D001639 ORTHO05D008274 4.6e-18 94.4 65 64.6
CARHR284310 Cardamine hirsuta HOM05D001639 ORTHO05D008274 4.6e-18 94.4 66 65.2
Cpa.g.sc49.41 Carica papaya HOM05D001639 ORTHO05D008274 4.6e-18 94.4 66 63.6
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 4.6e-18 94.4 57 71.9
Thecc.08G147300 Theobroma cacao HOM05D001639 ORTHO05D008274 4.6e-18 94.4 65 66.2
AT5G42130 Arabidopsis thaliana HOM05D001639 ORTHO05D008274 6.0e-18 94.0 69 60.9
Duzib093G1790 Durio zibethinus HOM05D001639 ORTHO05D008274 6.0e-18 94.0 65 64.6
Gohir.D12G020701 Gossypium hirsutum HOM05D000883 ORTHO05D022760 6.0e-18 94.0 65 64.6
Sp1g03830 Schrenkiella parvula HOM05D000883 ORTHO05D008274 6.0e-18 94.0 68 64.7
Solyc04g071010.4 Solanum lycopersicum HOM05D000883 ORTHO05D008274 6.0e-18 94.0 65 64.6
Sopen04g026960 Solanum pennellii HOM05D000883 ORTHO05D008274 6.0e-18 94.0 65 64.6
PGSC0003DMG401000790 Solanum tuberosum HOM05D000883 ORTHO05D008274 6.0e-18 94.0 65 64.6
PGSC0003DMG402000790 Solanum tuberosum HOM05D000883 ORTHO05D008274 6.0e-18 94.0 65 64.6
arahy.Tifrunner.gnm1.ann1.8L230K Arachis hypogaea HOM05D000883 ORTHO05D008274 7.9e-18 93.6 66 63.6
A10p03400 Brassica napus HOM05D000883 ORTHO05D008274 7.9e-18 93.6 68 64.7
BolC5t29094H Brassica oleracea HOM05D000883 ORTHO05D008274 7.9e-18 93.6 68 64.7
BraA10t42616Z Brassica rapa HOM05D000883 ORTHO05D008274 7.9e-18 93.6 68 64.7
Manes.18G089600 Manihot esculenta HOM05D001639 ORTHO05D008274 1.0e-17 93.2 66 63.6
Nn5g28676 Nelumbo nucifera HOM05D001639 ORTHO05D008274 1.0e-17 93.2 66 60.6
QL02p024608 Quercus lobata HOM05D001639 ORTHO05D008274 1.0e-17 93.2 66 60.6
Carub.0008s0493 Capsella rubella HOM05D000883 ORTHO05D008274 1.3e-17 92.8 60 68.3
Glyma.19G036500 Glycine max HOM05D000883 ORTHO05D022760 1.3e-17 92.8 77 53.2
Lsat_1_v5_gn_9_40341 Lactuca sativa HOM05D001639 ORTHO05D008274 1.3e-17 92.8 67 64.2
Lalb_Chr19g0130371 Lupinus albus HOM05D000883 ORTHO05D008274 1.3e-17 92.8 66 62.1
Medtr6g034515 Medicago truncatula HOM05D000883 ORTHO05D008274 1.3e-17 92.8 79 55.7
CiPaw.15G019200 Carya illinoinensis HOM05D001639 ORTHO05D008274 1.8e-17 92.4 65 61.5
Ca_19333_v3 Cicer arietinum L. HOM05D001639 ORTHO05D008274 1.8e-17 92.4 66 63.6
Prupe.8G024200 Prunus persica HOM05D001639 ORTHO05D008274 1.8e-17 92.4 63 65.1
CDE06G0876 Ceratophyllum demersum HOM05D000645 ORTHO05D008274 2.3e-17 92.0 68 57.4
Gohir.A08G038900 Gossypium hirsutum HOM05D001639 ORTHO05D008274 2.3e-17 92.0 65 63.1
Gohir.D08G049100 Gossypium hirsutum HOM05D000883 ORTHO05D008274 2.3e-17 92.0 65 63.1
Gorai.004G048600 Gossypium raimondii HOM05D001639 ORTHO05D008274 2.3e-17 92.0 65 63.1
C05p03120 Brassica napus HOM05D000883 ORTHO05D008274 3.0e-17 91.7 68 63.2
FvH4_2g14300 Fragaria vesca HOM05D001639 ORTHO05D008274 3.0e-17 91.7 66 62.1
FAN15G2052 Fragaria x ananassa HOM05D000883 ORTHO05D008274 3.0e-17 91.7 66 62.1
FAN20G0611 Fragaria x ananassa HOM05D000883 ORTHO05D008274 3.0e-17 91.7 66 62.1
Atru.chr13.2240 Acer truncatum HOM05D001639 ORTHO05D008274 3.9e-17 91.3 66 60.6
Glyma.02G084300 Glycine max HOM05D000883 ORTHO05D008274 3.9e-17 91.3 66 60.6
AUR62013522 Chenopodium quinoa HOM05D000883 ORTHO05D008274 5.1e-17 90.9 78 53.8
DCAR_014419 Daucus carota HOM05D001639 ORTHO05D008274 5.1e-17 90.9 76 53.9
Psat1g106760 Pisum sativum HOM05D000883 ORTHO05D008274 5.1e-17 90.9 70 58.6
Sp5g25580 Schrenkiella parvula HOM05D000883 ORTHO05D008274 5.1e-17 90.9 69 58.0
AUR62026753 Chenopodium quinoa HOM05D000883 ORTHO05D008274 6.7e-17 90.5 78 55.1
Gohir.D03G060611 Gossypium hirsutum HOM05D001639 ORTHO05D008274 6.7e-17 90.5 65 61.5
MBI19_g06155_MAGBIO Magnolia biondii HOM05D000883 ORTHO05D008274 6.7e-17 90.5 65 61.5
Potri.005G189600 Populus trichocarpa HOM05D000883 ORTHO05D008274 6.7e-17 90.5 66 62.1
Sabra05G0144900 Salix brachista HOM05D000883 ORTHO05D008274 6.7e-17 90.5 66 62.1
Gorai.013G111000 Gossypium raimondii HOM05D001639 ORTHO05D008274 8.7e-17 90.1 65 61.5
PSO675G7229 Papaver somniferum HOM05D001639 ORTHO05D008274 8.7e-17 90.1 66 57.6
MD10G1020700 Malus domestica HOM05D001639 ORTHO05D008274 1.5e-16 89.4 63 61.9
RcHm_v2.0_Chr6g0276601 Rosa chinensis HOM05D000883 ORTHO05D008274 1.5e-16 89.4 66 62.1
ATR0772G095 Amborella trichopoda HOM05D000883 ORTHO05D008274 2.5e-16 88.6 64 59.4
Aqoxy6G00384 Aquilegia oxysepala HOM05D001639 ORTHO05D008274 2.5e-16 88.6 66 59.1
arahy.Tifrunner.gnm1.ann1.8SN94U Arachis hypogaea HOM05D011683 ORTHO05D008274 2.5e-16 88.6 66 62.1
Sabra02G0055200 Salix brachista HOM05D000883 ORTHO05D008274 3.3e-16 88.2 63 60.3
MD05G1019200 Malus domestica HOM05D001639 ORTHO05D008274 5.7e-16 87.4 63 60.3
CANSAT25G1890 Cannabis sativa HOM05D000883 ORTHO05D008274 7.4e-16 87.0 62 59.7
Gohir.A02G112700 Gossypium hirsutum HOM05D001639 ORTHO05D008274 7.4e-16 87.0 65 60.0
PGR044G2310 Punica granatum HOM05D001639 ORTHO05D008274 9.7e-16 86.7 66 59.1
Lj7P367T38 Lonicera japonica HOM05D001639 ORTHO05D008274 1.3e-15 86.3 71 56.3
Lj2g0013114 Lotus japonicus HOM05D000883 ORTHO05D008274 1.6e-15 85.9 66 56.1
Ah.05g167630 Amaranthus hybridus HOM05D001639 ORTHO05D008274 2.8e-15 85.1 58 67.2
TPR.G36635 Trifolium pratense HOM05D000883 ORTHO05D008274 6.3e-15 84.0 66 57.6
GSVIVG01001666001 Vitis vinifera HOM05D001639 ORTHO05D008274 8.2e-15 83.6 52 67.3
AUR62035553 Chenopodium quinoa HOM05D001639 ORTHO05D008274 1.1e-14 83.2 60 63.3
Eucgr.F04259 Eucalyptus grandis HOM05D001639 ORTHO05D008274 1.1e-14 83.2 62 59.7
HanXRQChr11g0320361 Helianthus annuus HOM05D001639 ORTHO05D008274 1.4e-14 82.8 56 67.9
DCAR_005701 Daucus carota HOM05D000883 ORTHO05D008274 1.8e-14 82.4 66 53.0
Sed0025312 Sechium edule HOM05D000883 ORTHO05D008274 3.1e-14 81.6 62 61.3
SMO119G0121 Selaginella moellendorffii HOM05D001639 ORTHO05D008274 9.0e-14 80.1 65 56.9
AUR62006073 Chenopodium quinoa HOM05D000442 ORTHO05D007032 1.2e-13 79.7 60 60.0
AagrBONN_evm.TU.Sc2ySwM_344.278 Anthoceros agrestis HOM05D001639 ORTHO05D008274 2.6e-13 78.6 67 53.7
AagrBONN_evm.TU.Sc2ySwM_344.286 Anthoceros agrestis HOM05D001639 ORTHO05D008274 2.6e-13 78.6 67 53.7
Mapoly0028s0023 Marchantia polymorpha HOM05D001639 ORTHO05D008274 2.2e-12 75.5 65 55.4
SEGI_38715 Sequoiadendron giganteum HOM05D000883 ORTHO05D008274 2.2e-12 75.5 61 57.4
HPP92_027066 Vanilla planifolia HOM05D001639 ORTHO05D008274 3.2e-11 71.6 65 47.7
Dinv41106 Davidia involucrata HOM05D001639 ORTHO05D008274 2.7e-10 68.6 46 65.2
Zm00001eb140180 Zea mays HOM05D000883 ORTHO05D008274 6.1e-10 67.4 49 61.2
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.4e-09 66.2 45 71.1
Os01g0964900 Oryza sativa ssp. japonica HOM05D000883 ORTHO05D008274 5.1e-09 64.3 59 54.2
Gohir.D11G252850 Gossypium hirsutum HOM05D000883 ORTHO05D022760 2.5e-08 62.0 60 51.7
Mapoly0033s0136 Marchantia polymorpha HOM05D001639 ORTHO05D008274 5.7e-08 60.8 57 50.9
Gohir.D01G115150 Gossypium hirsutum HOM05D000883 ORTHO05D022760 1.7e-07 59.3 39 64.1
Gohir.D04G188550 Gossypium hirsutum HOM05D000883 ORTHO05D022760 1.7e-07 59.3 39 64.1
Gorai.007G271500 Gossypium raimondii HOM05D000883 ORTHO05D022760 1.7e-07 59.3 39 64.1
CBR_g32177 Chara braunii HOM05D001639 ORTHO05D008274 2.8e-07 58.5 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.1476 Anthoceros agrestis HOM05D001639 ORTHO05D008274 4.8e-07 57.8 68 45.6


User provided reference genes

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