Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 5.4e-133 477.6 236 100.0
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.1e-21 107.8 91 60.4
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 3.3e-21 106.3 79 63.3
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 4.3e-21 105.9 80 60.0
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 5.6e-21 105.5 92 54.3
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 4.7e-20 102.4 76 63.2
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 4.7e-20 102.4 76 63.2
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 6.2e-20 102.1 84 59.5
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 1.8e-19 100.5 72 59.7
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.8e-19 100.5 70 67.1
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 1.8e-19 100.5 79 60.8
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 2.3e-19 100.1 110 47.3
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 3.1e-19 99.8 80 57.5
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 3.1e-19 99.8 86 54.7
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 3.1e-19 99.8 88 55.7
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 4.0e-19 99.4 106 48.1
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 4.0e-19 99.4 73 63.0
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 8.9e-19 98.2 75 60.0
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 8.9e-19 98.2 72 58.3
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.5e-18 97.4 76 61.8
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.5e-18 97.4 86 53.5
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.5e-18 97.4 86 53.5
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 2.0e-18 97.1 106 47.2
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 2.0e-18 97.1 94 53.2
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 2.0e-18 97.1 86 53.5
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 2.6e-18 96.7 75 58.7
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 5.8e-18 95.5 75 57.3
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 7.5e-18 95.1 76 60.5
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 7.5e-18 95.1 72 62.5
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 7.5e-18 95.1 81 56.8
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.3e-17 94.4 84 53.6
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 1.3e-17 94.4 68 60.3
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 1.7e-17 94.0 81 53.1
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.7e-17 94.0 68 61.8
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.2e-17 93.6 76 53.9
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 2.9e-17 93.2 76 57.9
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.9e-17 93.2 70 61.4
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 2.9e-17 93.2 75 58.7
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 3.7e-17 92.8 80 56.2
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 3.7e-17 92.8 69 63.8
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 4.9e-17 92.4 76 55.3
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 4.9e-17 92.4 77 55.8
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.1e-16 91.3 68 61.8
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.1e-16 91.3 76 56.6
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 1.9e-16 90.5 70 55.7
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 4.1e-16 89.4 76 55.3
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 4.1e-16 89.4 76 55.3
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 5.4e-16 89.0 70 54.3
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 5.4e-16 89.0 80 50.0
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 9.2e-16 88.2 59 61.0
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 9.2e-16 88.2 67 62.7
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 9.2e-16 88.2 76 51.3
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 1.2e-15 87.8 60 61.7
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.2e-15 87.8 75 52.0
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.6e-15 87.4 60 61.7
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.1e-15 87.0 52 71.2
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 2.7e-15 86.7 60 60.0
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 2.7e-15 86.7 60 60.0
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 6.0e-15 85.5 66 53.0
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 6.0e-15 85.5 60 60.0
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 7.8e-15 85.1 60 58.3
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 1.0e-14 84.7 58 58.6
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 2.3e-14 83.6 56 60.7
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 2.3e-14 83.6 76 50.0
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 3.0e-14 83.2 64 57.8
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 3.0e-14 83.2 78 51.3
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 6.6e-14 82.0 48 75.0
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 6.6e-14 82.0 68 57.4
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 3.3e-13 79.7 72 51.4
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 3.3e-13 79.7 48 68.8
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 9.5e-13 78.2 72 47.2
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.2e-12 77.8 66 57.6
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 3.6e-12 76.3 56 60.7
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 6.2e-12 75.5 60 50.0
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 1.8e-11 73.9 60 53.3
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 1.2e-10 71.2 75 46.7
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 2.6e-10 70.1 60 55.0
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 5.8e-10 68.9 89 34.8
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 3.7e-09 66.2 53 58.5
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 1.4e-08 64.3 56 53.6
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 1.9e-08 63.9 58 53.4
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.6e-07 60.8 52 50.0
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 2.7e-07 60.1 53 47.2
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.0e-06 58.2 36 61.1
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 3.9e-06 56.2 39 56.4
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 3.9e-06 56.2 39 56.4


User provided reference genes

Program Settings