Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9854 Utricularia gibba HOM05D000442 ORTHO05D001242 1.6e-106 389.4 196 100.0
MSTRG.25007 Avicennia marina HOM05D000442 ORTHO05D001242 1.0e-20 104.4 147 46.9
SalBow7G3802 Salvia bowleyana HOM05D000442 ORTHO05D001242 4.5e-16 89.0 146 42.5
vmacro04613 Vaccinium macrocarpon HOM05D000442 ORTHO05D001242 1.0e-15 87.8 147 41.5
Actinidia29639 Actinidia chinensis HOM05D000442 ORTHO05D001242 2.2e-15 86.7 143 40.6
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 3.8e-15 85.9 146 41.1
CSS0017633 Camellia sinensis var. sinensis HOM05D000442 ORTHO05D001242 8.5e-15 84.7 144 38.2
Dinv22034 Davidia involucrata HOM05D000442 ORTHO05D001242 1.6e-13 80.5 145 40.0
Oeu059134.1 Olea europaea HOM05D000442 ORTHO05D001242 2.7e-13 79.7 145 37.9
TAR628G1025 Trochodendron aralioides HOM05D000442 ORTHO05D001242 2.7e-13 79.7 145 38.6
Cfa020714 Carpinus fangiana HOM05D000442 ORTHO05D001242 4.6e-13 79.0 145 37.2
Haze_19021 Corylus avellana HOM05D000442 ORTHO05D001242 1.4e-12 77.4 146 37.7
ECA232G2134 Erigeron canadensis HOM05D000442 ORTHO05D001242 1.4e-12 77.4 146 36.3
Migut.C00425 Erythranthe guttata HOM05D000442 ORTHO05D001242 1.4e-12 77.4 148 41.9
Manes.05G186000 Manihot esculenta HOM05D000442 ORTHO05D001242 1.4e-12 77.4 148 37.8
Dinv44909 Davidia involucrata HOM05D000442 ORTHO05D001242 1.8e-12 77.0 145 39.3
Oeu007815.1 Olea europaea HOM05D000442 ORTHO05D001242 2.3e-12 76.6 144 37.5
Phvul.009G113700 Phaseolus vulgaris HOM05D000442 ORTHO05D001242 3.9e-12 75.9 153 37.3
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 3.9e-12 75.9 146 38.4
EL10Ac1g02316 Beta vulgaris HOM05D000442 ORTHO05D001242 6.7e-12 75.1 146 36.3
Rhsim07G0215500 Rhododendron simsii HOM05D000442 ORTHO05D001242 6.7e-12 75.1 145 37.2
Atru.chr13.914 Acer truncatum HOM05D000442 ORTHO05D001242 8.8e-12 74.7 122 39.3
Hma1.2p1_1281F.1_g272580 Hydrangea macrophylla HOM05D000442 ORTHO05D001242 8.8e-12 74.7 147 37.4
Duzib116G0190 Durio zibethinus HOM05D000442 ORTHO05D001242 1.1e-11 74.3 148 38.5
HPP92_017689 Vanilla planifolia HOM05D000442 ORTHO05D001242 1.5e-11 73.9 147 34.7
SHI34214 Sapria himalayana HOM05D000442 ORTHO05D001242 2.0e-11 73.6 146 37.7
Gohir.D06G025400 Gossypium hirsutum HOM05D000442 ORTHO05D001242 2.5e-11 73.2 149 36.9
Gorai.010G029700 Gossypium raimondii HOM05D000442 ORTHO05D001242 2.5e-11 73.2 149 36.9
MBI16_g05034_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D001242 3.3e-11 72.8 144 30.6
Hund05245 Selenicereus undatus HOM05D000442 ORTHO05D001242 3.3e-11 72.8 149 32.9
Thecc.08G080400 Theobroma cacao HOM05D000442 ORTHO05D001242 3.3e-11 72.8 149 36.9
QL07p030432 Quercus lobata HOM05D000442 ORTHO05D001242 5.7e-11 72.0 146 36.3
QL12p040585 Quercus lobata HOM05D000442 ORTHO05D001242 5.7e-11 72.0 146 36.3
Gohir.A06G027900 Gossypium hirsutum HOM05D000442 ORTHO05D001242 7.4e-11 71.6 149 37.6
Sabra02G0088500 Salix brachista HOM05D000442 ORTHO05D001242 7.4e-11 71.6 148 35.8
GSVIVG01009261001 Vitis vinifera HOM05D000442 ORTHO05D001242 9.7e-11 71.2 144 36.8
QL04p091039 Quercus lobata HOM05D000442 ORTHO05D001242 1.7e-10 70.5 146 35.6
CDE02G4053 Ceratophyllum demersum HOM05D000442 ORTHO05D001242 2.2e-10 70.1 143 36.4
Aqoxy5G01941 Aquilegia oxysepala HOM05D000442 ORTHO05D001242 2.8e-10 69.7 147 36.7
Potri.002G112200 Populus trichocarpa HOM05D000442 ORTHO05D001242 3.7e-10 69.3 148 36.5
COL.COLO4_35360 Corchorus olitorius HOM05D000442 ORTHO05D001242 6.3e-10 68.6 151 37.7
ATR0767G052 Amborella trichopoda HOM05D000442 ORTHO05D001242 1.1e-09 67.8 149 34.9
Cpa.g.c33990 Carica papaya HOM05D000442 ORTHO05D001242 1.1e-09 67.8 146 34.2
DCAR_019337 Daucus carota HOM05D000442 ORTHO05D001242 1.1e-09 67.8 154 33.8
CiPaw.15G153600 Carya illinoinensis HOM05D000442 ORTHO05D001242 1.4e-09 67.4 148 34.5
CiPaw.15G157000 Carya illinoinensis HOM05D000442 ORTHO05D001242 1.4e-09 67.4 148 34.5
VMungo1309G2209 Vigna mungo HOM05D000442 ORTHO05D001242 3.1e-09 66.2 153 34.6
Glyma.04G088100 Glycine max HOM05D000442 ORTHO05D001242 4.1e-09 65.9 153 35.9
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 5.3e-09 65.5 58 58.6
Eucgr.E01631 Eucalyptus grandis HOM05D000442 ORTHO05D001242 5.3e-09 65.5 127 33.9
Sc15g0005250 Simmondsia chinensis HOM05D000442 ORTHO05D001242 9.1e-09 64.7 144 34.0
CiPaw.15G159100 Carya illinoinensis HOM05D000442 ORTHO05D001242 1.2e-08 64.3 148 33.8
CDE01G0294 Ceratophyllum demersum HOM05D000442 ORTHO05D001242 1.2e-08 64.3 142 33.1
Ca_15559_v3 Cicer arietinum L. HOM05D000442 ORTHO05D001242 1.2e-08 64.3 149 34.9
Sopen04g030710 Solanum pennellii HOM05D000442 ORTHO05D001242 1.5e-08 63.9 130 34.6
Peaxi162Scf01174g00012 Petunia axillaris HOM05D000442 ORTHO05D001242 2.0e-08 63.5 144 33.3
Lalb_Chr23g0269801 Lupinus albus HOM05D000442 ORTHO05D001242 2.6e-08 63.2 149 32.2
Lj4C85G7 Lonicera japonica HOM05D000583 ORTHO05D000442 3.4e-08 62.8 129 34.1
Prupe.1G543200 Prunus persica HOM05D000442 ORTHO05D001242 3.4e-08 62.8 154 33.8
Solyc04g077060.3 Solanum lycopersicum HOM05D000442 ORTHO05D001242 4.5e-08 62.4 150 34.0
MD08G1211200 Malus domestica HOM05D000442 ORTHO05D001242 1.0e-07 61.2 148 34.5
MBI16_g26736_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D001242 1.3e-07 60.8 147 32.0
Sed0014189 Sechium edule HOM05D000442 ORTHO05D001242 1.3e-07 60.8 149 31.5
AUR62035770 Chenopodium quinoa HOM05D000442 ORTHO05D001242 1.7e-07 60.5 146 32.2
Glyma.06G090100 Glycine max HOM05D000442 ORTHO05D001242 1.7e-07 60.5 153 32.7
PGSC0003DMG400004937 Solanum tuberosum HOM05D000442 ORTHO05D001242 1.7e-07 60.5 133 35.3
MELO3C003484.2 Cucumis melo HOM05D000442 ORTHO05D001242 2.9e-07 59.7 148 32.4
CAN.G416.57 Capsicum annuum HOM05D000442 ORTHO05D001242 3.8e-07 59.3 133 35.3
Ciclev10000476m.g Citrus clementina HOM05D000442 ORTHO05D001242 3.8e-07 59.3 151 32.5
CsaV3_3G048360 Cucumis sativus L. HOM05D000442 ORTHO05D001242 3.8e-07 59.3 148 31.8
PGR031G2900 Punica granatum HOM05D000442 ORTHO05D001242 6.5e-07 58.5 146 35.6
Ah.11g038940 Amaranthus hybridus HOM05D000442 ORTHO05D001242 1.1e-06 57.8 145 31.7
HanXRQChr01g0001751 Helianthus annuus HOM05D000442 ORTHO05D001242 1.1e-06 57.8 166 30.7
Nitab4.5_0003791g0010 Nicotiana tabacum HOM05D000442 ORTHO05D001242 1.1e-06 57.8 147 33.3
arahy.Tifrunner.gnm1.ann1.M4KHNU Arachis hypogaea HOM05D000442 ORTHO05D001242 1.4e-06 57.4 155 31.0
Nitab4.5_0001614g0040 Nicotiana tabacum HOM05D000442 ORTHO05D001242 1.4e-06 57.4 147 34.0
TWI12G0756 Tripterygium wilfordii HOM05D000442 ORTHO05D001242 3.2e-06 56.2 186 29.0
arahy.Tifrunner.gnm1.ann1.A0CKVX Arachis hypogaea HOM05D000442 ORTHO05D001242 5.5e-06 55.5 155 31.0
AUR62034959 Chenopodium quinoa HOM05D000442 ORTHO05D001242 7.2e-06 55.1 116 33.6


User provided reference genes

Program Settings