Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 1.5e-73 279.3 127 100.0
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 3.0e-53 211.8 123 77.2
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 8.7e-53 210.3 123 77.2
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 9.0e-50 200.3 123 73.2
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 1.2e-49 199.9 122 73.0
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 2.0e-49 199.1 121 71.1
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 2.0e-49 199.1 123 72.4
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 4.4e-49 198.0 121 70.2
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 5.8e-49 197.6 123 70.7
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 5.8e-49 197.6 123 70.7
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 7.6e-49 197.2 121 71.1
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 7.6e-49 197.2 121 70.2
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 9.9e-49 196.8 121 70.2
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 1.3e-48 196.4 121 70.2
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 1.3e-48 196.4 121 71.1
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 1.3e-48 196.4 122 69.7
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 1.7e-48 196.1 121 70.2
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 1.7e-48 196.1 122 72.1
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 2.2e-48 195.7 122 69.7
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 2.2e-48 195.7 123 71.5
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 2.9e-48 195.3 123 69.1
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 2.9e-48 195.3 121 69.4
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 3.8e-48 194.9 123 71.5
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 3.8e-48 194.9 122 69.7
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 4.9e-48 194.5 125 70.4
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 4.9e-48 194.5 122 72.1
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 8.4e-48 193.7 120 73.3
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 2.4e-47 192.2 123 69.9
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 3.2e-47 191.8 123 68.3
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 3.2e-47 191.8 122 71.3
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 3.2e-47 191.8 123 68.3
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 5.4e-47 191.0 123 68.3
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 5.4e-47 191.0 123 66.7
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 7.1e-47 190.7 123 68.3
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 9.3e-47 190.3 123 67.5
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 9.3e-47 190.3 123 68.3
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 9.3e-47 190.3 123 69.1
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 1.2e-46 189.9 119 68.9
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 1.6e-46 189.5 123 66.7
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.6e-46 189.5 123 66.7
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 2.1e-46 189.1 122 69.7
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 2.1e-46 189.1 122 69.7
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 3.5e-46 188.3 122 67.2
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 3.5e-46 188.3 122 68.0
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 4.6e-46 188.0 123 65.9
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 4.6e-46 188.0 122 67.2
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 6.0e-46 187.6 123 68.3
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 6.0e-46 187.6 123 65.9
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 7.8e-46 187.2 123 66.7
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 7.8e-46 187.2 123 67.5
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 7.8e-46 187.2 123 67.5
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 7.8e-46 187.2 118 70.3
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 1.7e-45 186.0 123 67.5
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 2.3e-45 185.7 117 71.8
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 3.0e-45 185.3 123 66.7
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 3.0e-45 185.3 123 66.7
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 3.0e-45 185.3 123 66.7
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 3.0e-45 185.3 123 66.7
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 5.1e-45 184.5 123 66.7
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 5.1e-45 184.5 122 67.2
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 6.6e-45 184.1 123 66.7
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 8.7e-45 183.7 123 66.7
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 1.1e-44 183.3 123 65.0
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 1.5e-44 183.0 122 63.1
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 2.5e-44 182.2 116 69.8
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 2.5e-44 182.2 111 73.0
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 2.5e-44 182.2 119 68.1
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 2.5e-44 182.2 122 65.6
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 7.3e-44 180.6 119 67.2
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.6e-43 179.5 123 65.0
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 1.6e-43 179.5 123 65.0
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.1e-43 179.1 110 70.0
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 2.1e-43 179.1 121 65.3
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 3.6e-43 178.3 122 64.8
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 1.1e-42 176.8 113 69.0
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 3.1e-42 175.3 107 69.2
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 3.1e-42 175.3 123 61.8
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.9e-42 174.1 123 63.4
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 1.2e-41 173.3 121 64.5
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 2.0e-41 172.6 116 64.7
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 3.4e-41 171.8 108 71.3
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 9.9e-41 170.2 112 65.2
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 1.7e-40 169.5 118 63.6
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 2.2e-40 169.1 120 64.2
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 2.9e-40 168.7 103 70.9
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 3.2e-39 165.2 105 68.6
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 2.7e-38 162.2 120 62.5
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 2.7e-38 162.2 105 65.7
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 2.3e-37 159.1 105 65.7
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 3.0e-37 158.7 140 53.6
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 2.5e-36 155.6 117 59.8
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 4.8e-35 151.4 98 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 3.1e-34 148.7 120 57.5
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 9.0e-34 147.1 97 64.9
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 2.2e-32 142.5 121 52.1
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.9e-31 139.4 123 52.0
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 2.1e-30 136.0 123 52.0
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 7.9e-30 134.0 90 64.4
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 6.2e-27 124.4 120 46.7
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 1.6e-22 109.8 77 59.7
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 3.0e-21 105.5 107 44.9
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 1.9e-12 76.3 101 39.6
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 1.9e-12 76.3 122 36.1
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 4.3e-12 75.1 122 35.2
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.3e-11 73.6 122 35.2
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 2.2e-11 72.8 122 35.2
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 4.8e-11 71.6 120 35.0
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 8.2e-11 70.9 124 31.5
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 1.4e-10 70.1 120 34.2
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 2.4e-10 69.3 104 35.6
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 6.9e-10 67.8 122 32.8
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 2.0e-09 66.2 87 39.1
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 2.0e-09 66.2 87 39.1
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.0e-09 66.2 122 32.8
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 2.0e-09 66.2 123 33.3
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.6e-09 65.9 126 34.1
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 3.4e-09 65.5 123 31.7
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 4.5e-09 65.1 122 32.8
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 4.5e-09 65.1 120 31.7
Hma1.2p1_0161F.1_g071770 Hydrangea macrophylla HOM05D003340 ORTHO05D003775 5.9e-09 64.7 123 34.1
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 5.9e-09 64.7 122 33.6
Mapoly0166s0008 Marchantia polymorpha HOM05D003340 ORTHO05D003775 7.7e-09 64.3 124 33.9
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 1.0e-08 63.9 87 32.2
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.0e-08 63.9 83 36.1
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 1.0e-08 63.9 122 31.1
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 1.0e-08 63.9 126 30.2
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 1.0e-08 63.9 119 29.4
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 1.7e-08 63.2 122 31.1
TAR636G0511 Trochodendron aralioides HOM05D003340 ORTHO05D003775 1.7e-08 63.2 120 32.5
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 2.2e-08 62.8 87 35.6
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 2.2e-08 62.8 120 30.8
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 2.2e-08 62.8 120 30.8
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.2e-08 62.8 122 31.1
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 2.2e-08 62.8 122 31.1
PSO528G0096 Papaver somniferum HOM05D003340 ORTHO05D003775 2.2e-08 62.8 127 31.5
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 2.9e-08 62.4 122 31.1
Glyma.14G150300 Glycine max HOM05D003340 ORTHO05D003775 2.9e-08 62.4 122 31.1
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 2.9e-08 62.4 126 31.0
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 2.9e-08 62.4 87 34.5
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 3.8e-08 62.0 123 30.9
MBI11_g05791_MAGBIO Magnolia biondii HOM05D003340 ORTHO05D003775 3.8e-08 62.0 120 32.5
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 3.8e-08 62.0 87 34.5
Gohir.A11G144700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 5.0e-08 61.6 120 33.3
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 5.0e-08 61.6 108 30.6
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 5.0e-08 61.6 88 34.1
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 6.5e-08 61.2 105 32.4
THA.LOC104808821 Tarenaya hassleriana HOM05D003340 ORTHO05D003775 6.5e-08 61.2 123 33.3
Gohir.D11G152366 Gossypium hirsutum HOM05D003340 ORTHO05D003775 8.5e-08 60.8 120 32.5
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 8.5e-08 60.8 122 30.3
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 1.1e-07 60.5 91 33.0
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 1.1e-07 60.5 120 32.5
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 1.4e-07 60.1 85 34.1
arahy.Tifrunner.gnm1.ann1.JPFK87 Arachis hypogaea HOM05D003340 ORTHO05D003775 1.9e-07 59.7 119 31.1
arahy.Tifrunner.gnm1.ann1.X0XLBA Arachis hypogaea HOM05D003340 ORTHO05D003775 1.9e-07 59.7 119 31.1
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.9e-07 59.7 100 35.0
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 3.2e-07 58.9 126 31.7
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 87 34.5
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 4.2e-07 58.5 95 35.8
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 4.2e-07 58.5 87 32.2
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 4.2e-07 58.5 120 30.0
Duzib041G0745 Durio zibethinus HOM05D003340 ORTHO05D003775 5.5e-07 58.2 122 30.3
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 34.5
Migut.N00692 Erythranthe guttata HOM05D003340 ORTHO05D003775 7.2e-07 57.8 91 35.2
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 7.2e-07 57.8 129 28.7
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 36.8
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 9.4e-07 57.4 126 31.7
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 9.4e-07 57.4 126 31.7
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 9.4e-07 57.4 122 27.9
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 1.2e-06 57.0 81 33.3
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 33.3
SGA_v2.0_scaffold120G33021 Striga asiatica HOM05D003340 ORTHO05D003775 1.2e-06 57.0 123 30.9
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.2e-06 57.0 90 34.4
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 1.6e-06 56.6 83 34.9
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 1.6e-06 56.6 120 29.2
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 34.5
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 2.1e-06 56.2 96 33.3
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 2.1e-06 56.2 88 35.2
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 3.6e-06 55.5 88 35.2
Nn3g19971 Nelumbo nucifera HOM05D003340 ORTHO05D003775 3.6e-06 55.5 62 37.1
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 3.6e-06 55.5 86 33.7
CSS0032864 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 4.7e-06 55.1 118 28.8
THA.LOC104826640 Tarenaya hassleriana HOM05D003340 ORTHO05D003775 4.7e-06 55.1 121 30.6
Ciclev10002808m.g Citrus clementina HOM05D003340 ORTHO05D003775 6.1e-06 54.7 121 30.6
Haze_00442 Corylus avellana HOM05D003340 ORTHO05D003775 6.1e-06 54.7 126 29.4
THA.LOC104817332 Tarenaya hassleriana HOM05D003340 ORTHO05D003775 7.9e-06 54.3 120 30.0


User provided reference genes

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