Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 0.0e+00 1697.6 872 100.0
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 5.1e-104 383.3 998 34.5
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 3.1e-101 374.0 967 33.9
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 2.2e-99 367.9 1003 34.7
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 5.0e-83 313.5 1062 31.0
unitig_85.g27153 Utricularia gibba HOM05D004021 ORTHO05D003767 8.2e-78 296.2 653 38.7
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 3.0e-72 277.7 1003 31.0
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 4.1e-69 267.3 889 31.5
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.6e-68 265.4 893 32.3
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.5e-66 258.1 935 29.6
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 7.2e-66 256.5 923 29.6
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 9.8e-55 219.5 993 26.8
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.7e-51 208.8 1021 26.2
unitig_85.g27152 Utricularia gibba HOM05D004021 ORTHO05D003767 1.2e-23 116.3 218 41.7
Oeu015740.1 Olea europaea HOM05D004021 ORTHO05D003767 7.8e-20 103.6 396 30.6
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 6.2e-17 94.0 1023 22.1
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 6.2e-17 94.0 1189 22.6
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.2e-14 85.5 1196 22.2
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.4e-13 82.0 180 35.0
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.6e-12 77.8 1200 22.2
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 6.0e-12 77.4 112 39.3
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.7e-11 75.9 124 36.3
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.3e-11 75.5 148 33.8
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.0e-11 75.1 208 30.3
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 3.9e-11 74.7 100 37.0
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 5.1e-11 74.3 111 36.9
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 5.1e-11 74.3 111 36.9
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 5.1e-11 74.3 111 36.9
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 6.6e-11 73.9 150 32.7
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 6.6e-11 73.9 208 30.3
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 1.1e-10 73.2 98 36.7
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 1.1e-10 73.2 76 46.1
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 2.5e-10 72.0 154 34.4
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 3.3e-10 71.6 98 35.7
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 3.3e-10 71.6 93 38.7
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 3.3e-10 71.6 109 36.7
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 4.3e-10 71.2 114 35.1
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 5.6e-10 70.9 99 40.4
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 5.6e-10 70.9 140 32.1
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 5.6e-10 70.9 140 32.1
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 5.6e-10 70.9 85 37.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 9.6e-10 70.1 136 33.1
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 9.6e-10 70.1 108 37.0
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.3e-09 69.7 165 28.5
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.6e-09 69.3 121 36.4
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 1.6e-09 69.3 174 31.6
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 2.1e-09 68.9 138 32.6
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.1e-09 68.9 87 42.5
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 2.8e-09 68.6 135 30.4
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 2.8e-09 68.6 91 44.0
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 2.8e-09 68.6 99 35.4
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 3.6e-09 68.2 138 31.9
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 3.6e-09 68.2 534 22.5
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 3.6e-09 68.2 84 36.9
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 4.8e-09 67.8 86 41.9
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 4.8e-09 67.8 105 38.1
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-09 67.8 105 38.1
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-09 67.8 105 38.1
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-09 67.8 105 38.1
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 4.8e-09 67.8 111 32.4
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 6.2e-09 67.4 136 32.4
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 6.2e-09 67.4 113 34.5
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 6.2e-09 67.4 111 32.4
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 8.1e-09 67.0 102 34.3
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 8.1e-09 67.0 84 35.7
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 8.1e-09 67.0 152 32.2
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.1e-08 66.6 92 40.2
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.1e-08 66.6 152 35.5
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.4e-08 66.2 119 36.1
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.4e-08 66.2 93 36.6
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.4e-08 66.2 103 38.8
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.8e-08 65.9 136 31.6
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.8e-08 65.9 92 34.8
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.8e-08 65.9 107 33.6
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.4e-08 65.5 102 37.3
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 3.1e-08 65.1 92 35.9
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 3.1e-08 65.1 243 28.8
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 4.0e-08 64.7 84 34.5
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 4.0e-08 64.7 84 34.5
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 4.0e-08 64.7 107 33.6
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 5.3e-08 64.3 329 27.1
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 6.9e-08 63.9 143 29.4
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 6.9e-08 63.9 107 32.7
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 6.9e-08 63.9 107 41.1
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 6.9e-08 63.9 95 38.9
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 6.9e-08 63.9 128 31.2
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 9.0e-08 63.5 103 39.8
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 1.2e-07 63.2 76 36.8
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 1.5e-07 62.8 113 32.7
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.5e-07 62.8 106 32.1
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.5e-07 62.8 148 29.7
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 2.0e-07 62.4 123 37.4
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 2.0e-07 62.4 138 29.7
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 2.0e-07 62.4 77 35.1
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.4e-07 61.6 97 36.1
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 5.8e-07 60.8 64 43.8
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 5.8e-07 60.8 95 37.9
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 7.6e-07 60.5 98 35.7
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 7.6e-07 60.5 99 35.4
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 9.9e-07 60.1 101 36.6
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 9.9e-07 60.1 93 36.6
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 9.9e-07 60.1 632 22.3
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.3e-06 59.7 643 23.8
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.3e-06 59.7 128 33.6
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 1.3e-06 59.7 96 36.5
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 2.2e-06 58.9 109 33.0
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.2e-06 58.9 96 35.4
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 2.2e-06 58.9 121 30.6
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 2.2e-06 58.9 262 27.1
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 3.8e-06 58.2 121 28.9
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 4.9e-06 57.8 76 36.8
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 4.9e-06 57.8 65 43.1
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 8.4e-06 57.0 101 36.6
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 8.4e-06 57.0 76 36.8


User provided reference genes

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