Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.8e-131 472.6 243 100.0
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 2.0e-61 240.0 204 66.2
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 3.7e-44 182.6 223 50.2
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 1.4e-43 180.6 205 54.1
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 3.5e-42 176.0 207 51.7
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 3.5e-42 176.0 205 50.7
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 5.0e-41 172.2 205 50.2
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 2.1e-39 166.8 203 48.3
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 1.4e-38 164.1 202 48.5
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 4.0e-38 162.5 203 47.3
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 1.2e-37 161.0 203 48.3
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 2.4e-35 153.3 198 45.5
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 2.0e-34 150.2 195 44.1
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 4.5e-34 149.1 206 44.2
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 7.7e-34 148.3 195 45.6
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 3.8e-33 146.0 203 43.3
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 3.8e-33 146.0 203 43.3
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 3.8e-33 146.0 193 46.1
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 3.8e-33 146.0 195 44.6
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 5.0e-33 145.6 189 47.1
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 6.5e-33 145.2 210 43.8
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 8.5e-33 144.8 206 43.2
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 1.5e-32 144.1 198 42.9
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 2.5e-32 143.3 196 43.9
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 4.2e-32 142.5 203 42.9
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 7.2e-32 141.7 198 45.5
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 1.2e-31 141.0 203 43.8
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.2e-31 141.0 199 45.2
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 1.6e-31 140.6 195 43.6
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 1.6e-31 140.6 195 43.6
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 1.6e-31 140.6 203 43.3
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.1e-31 140.2 203 43.3
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 2.7e-31 139.8 200 41.5
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 3.6e-31 139.4 203 41.9
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 3.6e-31 139.4 203 43.3
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 3.6e-31 139.4 203 44.3
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 4.7e-31 139.0 203 42.4
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 6.1e-31 138.7 202 43.1
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 6.1e-31 138.7 198 43.9
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 6.1e-31 138.7 205 43.9
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 8.0e-31 138.3 203 45.8
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 8.0e-31 138.3 195 43.6
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 8.0e-31 138.3 199 42.7
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 1.4e-30 137.5 220 41.4
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 2.3e-30 136.7 199 40.2
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 3.0e-30 136.3 218 39.4
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 3.0e-30 136.3 218 39.4
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 5.2e-30 135.6 194 42.8
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.2e-29 134.4 195 42.1
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 1.5e-29 134.0 196 45.9
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 4.4e-29 132.5 202 41.1
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 4.4e-29 132.5 193 42.0
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 4.4e-29 132.5 208 41.8
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 7.5e-29 131.7 211 40.3
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 1.3e-28 131.0 194 42.3
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 1.7e-28 130.6 195 44.1
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.7e-28 130.6 196 41.3
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 2.2e-28 130.2 204 38.7
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 2.8e-28 129.8 197 42.1
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 3.7e-28 129.4 194 41.8
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 8.3e-28 128.3 194 41.2
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 8.3e-28 128.3 193 39.9
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 1.1e-27 127.9 207 39.1
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.4e-27 127.5 206 39.8
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.8e-27 127.1 206 39.8
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.8e-27 127.1 194 40.2
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 2.4e-27 126.7 206 41.3
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 2.4e-27 126.7 179 41.9
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 3.1e-27 126.3 195 40.0
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 3.1e-27 126.3 197 41.6
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 4.1e-27 125.9 206 39.3
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 5.4e-27 125.6 219 35.2
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 5.4e-27 125.6 189 39.7
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 7.0e-27 125.2 196 40.3
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 7.0e-27 125.2 196 40.3
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 7.0e-27 125.2 191 39.3
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 9.1e-27 124.8 193 39.4
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 1.2e-26 124.4 189 40.2
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 1.6e-26 124.0 179 41.3
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 2.0e-26 123.6 197 39.1
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.0e-26 123.6 206 39.8
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 2.0e-26 123.6 189 40.2
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 4.5e-26 122.5 195 40.0
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 5.9e-26 122.1 196 39.8
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 7.7e-26 121.7 179 41.3
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 1.0e-25 121.3 179 42.5
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 1.3e-25 120.9 196 39.3
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 6.6e-25 118.6 196 39.3
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 6.6e-25 118.6 195 39.5
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 8.6e-25 118.2 194 38.1
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 1.1e-24 117.9 197 38.6
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 1.5e-24 117.5 196 38.3
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 1.9e-24 117.1 176 42.6
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 7.2e-24 115.2 198 38.4
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 7.2e-24 115.2 217 38.7
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 7.2e-24 115.2 194 38.1
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 9.5e-24 114.8 200 39.5
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 9.5e-24 114.8 213 35.7
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 2.1e-23 113.6 176 39.8
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 2.1e-23 113.6 200 38.5
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 3.0e-22 109.8 190 36.8
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 8.9e-22 108.2 196 39.8
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 3.4e-21 106.3 203 35.5
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 7.5e-21 105.1 221 36.7
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 7.5e-21 105.1 155 38.7
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 7.5e-21 105.1 198 37.4
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 9.8e-21 104.8 197 35.5
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 2.2e-20 103.6 203 34.5
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 4.9e-20 102.4 175 37.7
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 8.3e-20 101.7 198 37.9
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 2.4e-19 100.1 218 33.9
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 7.0e-19 98.6 195 33.8
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 1.6e-18 97.4 169 36.7
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 4.5e-18 95.9 162 39.5
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 2.9e-17 93.2 211 33.2
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 6.6e-17 92.0 195 32.8
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.6e-15 87.4 192 33.9
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 4.7e-15 85.9 87 48.3
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 6.1e-15 85.5 195 30.3
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 6.1e-15 85.5 195 30.3
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 5.2e-14 82.4 192 32.8
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 1.5e-13 80.9 195 30.3
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 2.6e-13 80.1 195 28.7
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 5.8e-13 79.0 67 65.7
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 3.2e-11 73.2 65 63.1
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 1.6e-10 70.9 78 41.0
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 4.6e-10 69.3 81 40.7
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 1.0e-09 68.2 78 37.2
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 1.1e-08 64.7 194 27.3
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 3.3e-08 63.2 192 30.2
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 6.8e-06 55.5 210 25.2


User provided reference genes

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