Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9749 Utricularia gibba HOM05D003737 ORTHO05D004640 2.1e-233 812.0 419 100.0
unitig_749.g13793 Utricularia gibba HOM05D003737 ORTHO05D004640 2.9e-137 492.7 386 66.8
MSTRG.20485 Avicennia marina HOM05D003737 ORTHO05D004640 3.1e-91 339.7 335 52.2
Migut.B01171 Erythranthe guttata HOM05D003737 ORTHO05D004640 8.0e-87 325.1 333 52.9
unitig_22.g5336 Utricularia gibba HOM05D003737 ORTHO05D004640 2.0e-85 320.5 323 54.8
SGA_v2.0_scaffold182G39819 Striga asiatica HOM05D003737 ORTHO05D004640 2.9e-81 306.6 338 48.2
SGA_v2.0_scaffold309G48158 Striga asiatica HOM05D003737 ORTHO05D004640 1.5e-80 304.3 347 48.4
Oeu013042.2 Olea europaea HOM05D003737 ORTHO05D004640 4.1e-75 286.2 406 43.6
Peaxi162Scf00220g00010 Petunia axillaris HOM05D003737 ORTHO05D004640 1.8e-67 260.8 353 44.2
Nitab4.5_0002687g0030 Nicotiana tabacum HOM05D003737 ORTHO05D004640 2.6e-61 240.4 269 48.3
Nitab4.5_0004903g0010 Nicotiana tabacum HOM05D003737 ORTHO05D004640 5.7e-61 239.2 402 38.8
Hund06832 Selenicereus undatus HOM05D003737 ORTHO05D004640 9.8e-61 238.4 279 44.4
Gorai.010G212200 Gossypium raimondii HOM05D003737 ORTHO05D004640 1.3e-60 238.0 404 38.9
Gohir.D06G180700 Gossypium hirsutum HOM05D003737 ORTHO05D004640 2.8e-60 236.9 273 45.8
PGSC0003DMG402027528 Solanum tuberosum HOM05D003737 ORTHO05D004640 2.8e-60 236.9 401 37.7
Dinv20457 Davidia involucrata HOM05D003737 ORTHO05D004640 6.3e-60 235.7 274 43.8
Hma1.2p1_0233F.1_g098040 Hydrangea macrophylla HOM05D003737 ORTHO05D004640 8.3e-60 235.3 400 37.0
Lj9C660G5 Lonicera japonica HOM05D003737 ORTHO05D004640 1.4e-59 234.6 319 41.4
Ciclev10001582m.g Citrus clementina HOM05D003737 ORTHO05D004640 2.4e-59 233.8 284 42.3
Solyc01g096780.4 Solanum lycopersicum HOM05D003737 ORTHO05D004640 2.4e-59 233.8 288 44.1
Sopen01g040480 Solanum pennellii HOM05D003737 ORTHO05D004640 2.4e-59 233.8 401 38.9
Eucgr.J00319 Eucalyptus grandis HOM05D003737 ORTHO05D004640 3.1e-59 233.4 298 43.0
Atru.chr12.1119 Acer truncatum HOM05D003737 ORTHO05D004640 4.1e-59 233.0 317 41.3
Gohir.A06G171900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 4.1e-59 233.0 404 37.9
Glyma.13G185300 Glycine max HOM05D003737 ORTHO05D004640 1.6e-58 231.1 395 38.2
Duzib106G0442 Durio zibethinus HOM05D003737 ORTHO05D004640 2.7e-58 230.3 402 36.3
Phvul.011G188500 Phaseolus vulgaris HOM05D003737 ORTHO05D004640 4.5e-58 229.6 258 46.1
Thecc.10G131100 Theobroma cacao HOM05D003737 ORTHO05D004640 5.9e-58 229.2 401 36.7
TWI34G0525 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 1.7e-57 227.6 291 41.9
Cpa.g.sc33.135 Carica papaya HOM05D003737 ORTHO05D004640 2.9e-57 226.9 286 43.7
Haze_03384 Corylus avellana HOM05D003737 ORTHO05D004640 2.9e-57 226.9 310 39.4
Manes.05G191000 Manihot esculenta HOM05D003737 ORTHO05D004640 2.9e-57 226.9 398 35.7
TAR633G0465 Trochodendron aralioides HOM05D003737 ORTHO05D004640 2.9e-57 226.9 268 42.2
VMungo0647G1094 Vigna mungo HOM05D003737 ORTHO05D004640 2.9e-57 226.9 259 45.9
CiPaw.13G048500 Carya illinoinensis HOM05D003737 ORTHO05D004640 3.8e-57 226.5 323 39.9
Sc09g0004980 Simmondsia chinensis HOM05D003737 ORTHO05D004640 3.8e-57 226.5 268 42.9
Sed0006452 Sechium edule HOM05D003737 ORTHO05D004640 6.6e-57 225.7 267 40.1
vmacro13791 Vaccinium macrocarpon HOM05D003737 ORTHO05D004640 6.6e-57 225.7 289 42.9
Gorai.012G020700 Gossypium raimondii HOM05D003737 ORTHO05D004640 8.6e-57 225.3 264 45.5
COL.COLO4_05028 Corchorus olitorius HOM05D003737 ORTHO05D004640 1.1e-56 224.9 403 36.2
Duzib128G0945 Durio zibethinus HOM05D003737 ORTHO05D004640 1.5e-56 224.6 399 36.6
Glyma.15G223100 Glycine max HOM05D003737 ORTHO05D004640 1.5e-56 224.6 286 42.0
MD02G1266700 Malus domestica HOM05D003737 ORTHO05D004640 1.5e-56 224.6 302 41.4
PSO675G8349 Papaver somniferum HOM05D003737 ORTHO05D004640 1.5e-56 224.6 296 39.9
Potri.010G247900 Populus trichocarpa HOM05D003737 ORTHO05D004640 1.5e-56 224.6 269 43.1
Prupe.2G056900 Prunus persica HOM05D003737 ORTHO05D004640 1.5e-56 224.6 400 36.8
Ca_24114_v3 Cicer arietinum L. HOM05D003737 ORTHO05D004640 1.9e-56 224.2 404 34.9
Gohir.D04G017900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 2.5e-56 223.8 264 45.1
Cfa010430 Carpinus fangiana HOM05D003737 ORTHO05D004640 7.3e-56 222.2 322 38.2
CsaV3_6G004570 Cucumis sativus L. HOM05D003737 ORTHO05D004640 9.5e-56 221.9 266 41.0
TWI32G0890 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 9.5e-56 221.9 265 44.2
MELO3C019928.2 Cucumis melo HOM05D003737 ORTHO05D004640 2.1e-55 220.7 267 40.8
MD07G1053000 Malus domestica HOM05D003737 ORTHO05D004640 2.1e-55 220.7 397 35.5
ClCG08G008580 Citrullus lanatus HOM05D003737 ORTHO05D004640 2.8e-55 220.3 267 40.1
Lalb_Chr03g0032471 Lupinus albus HOM05D003737 ORTHO05D004640 2.8e-55 220.3 390 36.2
Lalb_Chr01g0007591 Lupinus albus HOM05D003737 ORTHO05D004640 3.6e-55 219.9 390 34.6
PGR044G1985 Punica granatum HOM05D003737 ORTHO05D004640 6.1e-55 219.2 341 38.4
Sabra10G0193400 Salix brachista HOM05D003737 ORTHO05D004640 6.1e-55 219.2 270 41.1
Sed0018433 Sechium edule HOM05D003737 ORTHO05D004640 6.1e-55 219.2 337 37.1
Lj3g0019804 Lotus japonicus HOM05D003737 ORTHO05D004640 5.2e-54 216.1 343 39.4
PSO017G3614 Papaver somniferum HOM05D003737 ORTHO05D004640 5.2e-54 216.1 360 37.2
Gohir.A05G398100 Gossypium hirsutum HOM05D003737 ORTHO05D004640 1.2e-53 214.9 319 38.6
CDE09G1399 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 2.0e-53 214.2 343 37.6
Actinidia12270 Actinidia chinensis HOM05D003737 ORTHO05D004640 3.4e-53 213.4 406 36.0
EL10Ac4g08805 Beta vulgaris HOM05D003737 ORTHO05D004640 3.4e-53 213.4 269 40.5
Actinidia31420 Actinidia chinensis HOM05D003737 ORTHO05D004640 4.4e-53 213.0 402 36.1
CANSAT56G0630 Cannabis sativa HOM05D003737 ORTHO05D004640 5.8e-53 212.6 401 36.4
Medtr8g043510 Medicago truncatula HOM05D003737 ORTHO05D004640 5.8e-53 212.6 396 35.4
MBI19_g24737_MAGBIO Magnolia biondii HOM05D003737 ORTHO05D004640 7.5e-53 212.2 358 38.3
Lsat_1_v5_gn_7_65181 Lactuca sativa HOM05D003737 ORTHO05D004640 1.7e-52 211.1 274 40.1
Psat4g141920 Pisum sativum HOM05D003737 ORTHO05D004640 2.2e-52 210.7 395 36.7
Ah.04g162720 Amaranthus hybridus HOM05D000296 ORTHO05D000175 2.9e-52 210.3 278 39.2
PSO170G3077 Papaver somniferum HOM05D003737 ORTHO05D004640 8.3e-52 208.8 310 40.0
Rhsim07G0072700 Rhododendron simsii HOM05D003737 ORTHO05D004640 1.9e-51 207.6 398 36.7
CANSAT78G1307 Cannabis sativa HOM05D003737 ORTHO05D004640 2.4e-51 207.2 400 36.2
Sabra08G0006600 Salix brachista HOM05D003737 ORTHO05D004640 3.2e-51 206.8 271 40.2
Potri.008G010900 Populus trichocarpa HOM05D003737 ORTHO05D004640 4.1e-51 206.5 265 40.0
CSS0038854 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 7.0e-51 205.7 396 34.8
CSS0046027 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 7.0e-51 205.7 396 34.8
TAR636G0393 Trochodendron aralioides HOM05D003737 ORTHO05D004640 9.2e-51 205.3 281 40.6
HPP92_021189 Vanilla planifolia HOM05D003737 ORTHO05D004640 9.2e-51 205.3 261 44.8
ECA240G2259 Erigeron canadensis HOM05D003737 ORTHO05D004640 2.7e-50 203.8 276 40.2
AUR62041279 Chenopodium quinoa HOM05D003737 ORTHO05D004640 6.0e-50 202.6 276 38.4
PSO170G6472 Papaver somniferum HOM05D003737 ORTHO05D004640 7.8e-50 202.2 342 34.8
TWI63G1132 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 1.0e-49 201.8 291 38.8
HanXRQChr03g0073711 Helianthus annuus HOM05D003737 ORTHO05D004640 1.3e-49 201.4 266 40.6
Aqoxy2G00024 Aquilegia oxysepala HOM05D003737 ORTHO05D004640 3.0e-49 200.3 272 41.5
PSO782G4010 Papaver somniferum HOM05D003737 ORTHO05D004640 3.0e-49 200.3 264 39.4
QL04p051647 Quercus lobata HOM05D003737 ORTHO05D004640 3.0e-49 200.3 407 35.1
CiPaw.14G038200 Carya illinoinensis HOM05D003737 ORTHO05D004640 6.6e-49 199.1 285 39.3
CAN.G134.41 Capsicum annuum HOM05D003737 ORTHO05D004640 1.1e-48 198.4 209 49.8
FAN10G1609 Fragaria x ananassa HOM05D003737 ORTHO05D004640 1.1e-48 198.4 302 39.4
FAN06G1525 Fragaria x ananassa HOM05D003737 ORTHO05D004640 2.5e-48 197.2 328 38.7
FvH4_7g04870 Fragaria vesca HOM05D003737 ORTHO05D004640 3.3e-48 196.8 304 39.1
Duzib128G0026 Durio zibethinus HOM05D003737 ORTHO05D004640 7.3e-48 195.7 271 41.7
RcHm_v2.0_Chr1g0330551 Rosa chinensis HOM05D003737 ORTHO05D004640 2.8e-47 193.7 300 39.0
Thhalv10020697m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 1.4e-46 191.4 400 31.5
Os05g0270200 Oryza sativa ssp. japonica HOM05D003737 ORTHO05D004640 1.8e-46 191.0 324 35.8
DCAR_003288 Daucus carota HOM05D003737 ORTHO05D004640 8.9e-46 188.7 343 37.0
AL3G22200 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 2.6e-45 187.2 397 32.0
Nn6g33270 Nelumbo nucifera HOM05D003737 ORTHO05D004640 2.6e-45 187.2 366 33.9
TPR.G25035 Trifolium pratense HOM05D003737 ORTHO05D004640 2.6e-45 187.2 245 41.2
SHI21216 Sapria himalayana HOM05D003737 ORTHO05D004640 3.4e-45 186.8 288 37.5
AL532U10020 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 4.4e-45 186.4 397 31.7
Carub.0003s0996 Capsella rubella HOM05D003737 ORTHO05D004640 6.4e-44 182.6 310 36.5
AT3G10730 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 8.3e-44 182.2 397 32.0
CARHR085310 Cardamine hirsuta HOM05D003737 ORTHO05D004640 8.3e-44 182.2 400 30.0
Aa31LG3G3660 Aethionema arabicum HOM05D003737 ORTHO05D004640 1.1e-43 181.8 401 31.7
ATR0307G049 Amborella trichopoda HOM05D003737 ORTHO05D004640 1.1e-43 181.8 268 40.3
RcHm_v2.0_Chr1g0324281 Rosa chinensis HOM05D003737 ORTHO05D004640 1.1e-43 181.8 341 35.5
CDE08G0077 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 1.4e-43 181.4 267 38.6
Thhalv10013430m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 4.1e-43 179.9 404 32.2
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 7.0e-43 179.1 398 30.4
BolC9t59927H Brassica oleracea HOM05D003737 ORTHO05D004081 1.2e-42 178.3 300 36.3
HanXRQChr09g0247521 Helianthus annuus HOM05D003737 ORTHO05D004640 1.6e-42 177.9 282 37.6
Sp6g37810 Schrenkiella parvula HOM05D003737 ORTHO05D004640 2.1e-42 177.6 293 35.8
vmacro23127 Vaccinium macrocarpon HOM05D003737 ORTHO05D002937 2.1e-42 177.6 281 38.1
C09p71760 Brassica napus HOM05D003737 ORTHO05D004081 3.5e-42 176.8 300 36.0
Zm00001eb233650 Zea mays HOM05D003737 ORTHO05D004640 6.0e-42 176.0 260 37.7
arahy.Tifrunner.gnm1.ann1.3J71J7 Arachis hypogaea HOM05D003737 ORTHO05D004640 7.8e-42 175.6 334 35.6
Os01g0267600 Oryza sativa ssp. japonica HOM05D003737 ORTHO05D004640 1.0e-41 175.3 262 37.8
arahy.Tifrunner.gnm1.ann1.J916II Arachis hypogaea HOM05D003737 ORTHO05D004640 1.3e-41 174.9 334 35.9
BolC5t34394H Brassica oleracea HOM05D003737 ORTHO05D004640 1.3e-41 174.9 403 30.5
Aa31LG11G5690 Aethionema arabicum HOM05D003737 ORTHO05D004640 2.3e-41 174.1 408 30.9
BraA05t22639Z Brassica rapa HOM05D003737 ORTHO05D004640 2.3e-41 174.1 398 30.4
CANSAT78G0409 Cannabis sativa HOM05D003737 ORTHO05D004640 2.3e-41 174.1 193 48.7
CARHR208270 Cardamine hirsuta HOM05D003737 ORTHO05D004640 3.9e-41 173.3 405 31.4
Zm00001eb128110 Zea mays HOM05D003737 ORTHO05D004640 5.0e-41 172.9 266 36.8
HPP92_012444 Vanilla planifolia HOM05D003737 ORTHO05D004640 8.6e-41 172.2 264 39.8
AL6G14700 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 5.6e-40 169.5 400 30.2
A10p31150 Brassica napus HOM05D003737 ORTHO05D004081 2.1e-39 167.5 301 33.9
BraA10t45159Z Brassica rapa HOM05D003737 ORTHO05D004081 2.1e-39 167.5 301 33.9
AT5G04990 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 2.8e-39 167.2 402 31.1
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 3.6e-39 166.8 339 32.7
BcaC06g32213 Brassica carinata HOM05D003737 ORTHO05D004640 8.1e-39 165.6 304 35.2
BcaB05g21740 Brassica carinata HOM05D003737 ORTHO05D004640 7.5e-37 159.1 338 31.7
ECA236G2275 Erigeron canadensis HOM05D003737 ORTHO05D004640 1.4e-35 154.8 202 42.1
Sp3g09060 Schrenkiella parvula HOM05D003737 ORTHO05D004640 1.9e-35 154.5 402 28.9
Carub.0006s0393 Capsella rubella HOM05D003737 ORTHO05D004640 2.4e-35 154.1 402 29.4
Lsat_1_v5_gn_1_105000 Lactuca sativa HOM05D003737 ORTHO05D004640 9.2e-35 152.1 258 36.4
Lsat_1_v5_gn_1_105040 Lactuca sativa HOM05D003737 ORTHO05D004640 9.2e-35 152.1 265 37.7
THA.LOC104823158 Tarenaya hassleriana HOM05D003737 ORTHO05D004640 4.6e-34 149.8 287 32.8
BcaC06g32214 Brassica carinata HOM05D003737 ORTHO05D004640 4.3e-32 143.3 275 33.1
SMO356G0438 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 2.8e-31 140.6 218 35.3
SEGI_05544 Sequoiadendron giganteum HOM05D003737 ORTHO05D004640 5.2e-30 136.3 284 33.1
DCAR_022276 Daucus carota HOM05D003737 ORTHO05D004640 7.6e-29 132.5 149 47.0
Mapoly0147s0033 Marchantia polymorpha HOM05D003737 ORTHO05D004640 7.6e-29 132.5 422 28.7
Pp3c7_4170 Physcomitrium patens HOM05D003737 ORTHO05D004640 7.6e-29 132.5 215 36.7
SMO119G0482 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 3.8e-28 130.2 199 38.7
SMO266G0096 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 8.4e-28 129.0 239 32.6
DCAR_022277 Daucus carota HOM05D003737 ORTHO05D004640 1.4e-27 128.3 109 56.9
Pp3c11_22530 Physcomitrium patens HOM05D003737 ORTHO05D004640 2.4e-27 127.5 252 32.9
SMO104G0002 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 5.4e-27 126.3 215 34.0
FAN03G1506 Fragaria x ananassa HOM05D003737 ORTHO05D004640 1.0e-25 122.1 241 34.4
AagrBONN_evm.TU.Sc2ySwM_344.2065 Anthoceros agrestis HOM05D003737 ORTHO05D004640 1.2e-23 115.2 328 27.4
PGR083G2251 Punica granatum HOM05D003737 ORTHO05D004640 4.0e-22 110.2 112 49.1
SEGI_23640 Sequoiadendron giganteum HOM05D003737 ORTHO05D004640 1.3e-20 105.1 115 46.1
BolC1t05361H Brassica oleracea HOM05D003737 ORTHO05D004640 1.9e-19 101.3 177 35.0
RcHm_v2.0_Chr2g0101681 Rosa chinensis HOM05D003737 ORTHO05D004640 2.1e-18 97.8 98 52.0
Lsat_1_v5_gn_4_103680 Lactuca sativa HOM05D003737 ORTHO05D004640 9.6e-16 89.0 99 44.4
DCAR_014025 Daucus carota HOM05D003737 ORTHO05D004640 4.8e-15 86.7 160 38.1
SGA_v2.0_scaffold195G40842 Striga asiatica HOM05D003737 ORTHO05D004640 5.3e-14 83.2 194 30.9
C08p01570 Brassica napus HOM05D003737 ORTHO05D004640 4.5e-13 80.1 72 54.2
GSVIVG01001935001 Vitis vinifera HOM05D003737 ORTHO05D004640 8.4e-12 75.9 43 76.7
FvH4_1g13360 Fragaria vesca HOM05D003737 ORTHO05D004640 4.2e-11 73.6 103 39.8
QL93p0223_0017 Quercus lobata HOM05D003737 ORTHO05D004640 9.3e-11 72.4 182 29.7
PRCOL_00004494 Prasinoderma coloniale HOM05D003737 ORTHO05D004640 2.1e-10 71.2 118 30.5
RcHm_v2.0_Chr2g0101131 Rosa chinensis HOM05D003737 ORTHO05D004640 1.9e-08 64.7 40 65.0
MCO09G802 Micromonas commoda HOM05D003737 ORTHO05D004640 2.5e-08 64.3 104 36.5
FAN23G2857 Fragaria x ananassa HOM05D003737 ORTHO05D004640 7.4e-08 62.8 113 32.7
Haze_10688 Corylus avellana HOM05D003737 ORTHO05D004640 1.4e-06 58.5 122 27.0


User provided reference genes

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