Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 5.4e-306 1053.5 532 100.0
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 2.3e-147 526.6 462 62.6
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 8.7e-147 524.6 465 63.2
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.1e-144 517.7 470 60.0
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 5.3e-144 515.4 463 61.3
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 9.9e-143 511.1 467 60.0
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 2.2e-142 510.0 473 60.7
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 4.9e-142 508.8 489 58.7
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 8.4e-142 508.1 473 60.3
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 4.2e-141 505.8 488 58.4
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 7.1e-141 505.0 438 61.9
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 2.1e-140 503.4 393 66.9
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 7.9e-140 501.5 474 58.6
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.3e-139 500.7 393 66.7
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 3.0e-139 499.6 406 64.3
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 3.9e-139 499.2 475 58.1
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 8.7e-139 498.0 480 57.5
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 1.5e-138 497.3 409 63.3
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 1.9e-138 496.9 468 59.4
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 4.3e-138 495.7 500 57.4
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 1.3e-137 494.2 398 64.8
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.4e-136 490.0 428 61.4
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 3.1e-136 489.6 386 66.1
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 4.0e-136 489.2 390 64.1
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 9.0e-136 488.0 434 62.0
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 1.2e-135 487.6 469 58.4
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 2.0e-135 486.9 505 55.4
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 5.8e-135 485.3 549 53.9
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 1.3e-134 484.2 462 59.3
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 2.9e-134 483.0 476 57.6
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 6.5e-134 481.9 409 62.6
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 8.4e-134 481.5 430 60.0
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.9e-133 480.3 424 61.8
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 1.9e-133 480.3 428 61.7
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 2.5e-133 479.9 424 61.3
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 5.5e-133 478.8 398 63.1
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 7.1e-133 478.4 386 64.2
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 9.3e-133 478.0 382 65.7
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 9.3e-133 478.0 432 59.0
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 9.3e-133 478.0 418 60.5
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.6e-132 477.2 433 59.6
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 1.6e-132 477.2 385 64.7
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 2.1e-132 476.9 453 59.8
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 2.7e-132 476.5 433 59.1
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 6.0e-132 475.3 435 59.5
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 7.9e-132 474.9 395 63.3
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 7.9e-132 474.9 411 61.3
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.0e-131 474.6 424 60.8
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 1.3e-131 474.2 385 65.2
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 3.0e-131 473.0 435 58.9
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 3.9e-131 472.6 439 59.7
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 5.1e-131 472.2 383 64.0
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 6.7e-131 471.9 411 60.8
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 6.7e-131 471.9 418 60.5
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 6.7e-131 471.9 470 55.7
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 8.7e-131 471.5 442 59.3
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 1.5e-130 470.7 385 63.9
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 1.9e-130 470.3 384 63.5
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 2.5e-130 469.9 441 57.6
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 3.3e-130 469.5 385 63.6
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 3.3e-130 469.5 439 58.8
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 3.3e-130 469.5 380 63.9
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 3.3e-130 469.5 480 55.2
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 4.3e-130 469.2 462 57.8
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 7.4e-130 468.4 372 65.9
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 7.4e-130 468.4 451 57.6
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 7.4e-130 468.4 384 62.8
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 9.6e-130 468.0 384 62.2
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.6e-129 467.2 424 59.7
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.1e-129 466.8 424 59.4
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 3.7e-129 466.1 472 55.9
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 4.1e-128 462.6 471 55.4
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.1e-128 462.6 486 54.5
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 5.3e-128 462.2 463 57.2
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 6.9e-128 461.8 497 53.5
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 1.2e-127 461.1 465 56.1
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 2.0e-127 460.3 456 56.4
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.6e-127 459.9 469 55.2
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 2.6e-127 459.9 474 55.9
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 3.4e-127 459.5 425 59.1
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 4.5e-127 459.1 426 58.5
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.3e-126 457.6 467 54.6
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 1.7e-126 457.2 466 53.9
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 2.9e-126 456.4 458 55.2
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 3.8e-126 456.1 458 55.0
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 3.8e-126 456.1 383 62.4
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 6.5e-126 455.3 463 55.1
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 8.4e-126 454.9 388 61.6
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 1.1e-125 454.5 383 63.2
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 3.2e-125 453.0 385 61.0
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 7.2e-125 451.8 413 58.6
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 3.5e-124 449.5 469 53.7
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 3.9e-123 446.0 414 58.0
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 1.5e-119 434.1 373 61.7
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 1.5e-119 434.1 373 61.7
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 5.9e-119 432.2 483 54.5
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 7.2e-117 425.2 476 51.5
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 2.7e-116 423.3 368 61.4
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 4.6e-116 422.5 361 60.1
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 1.1e-114 417.9 466 51.7
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 1.5e-114 417.5 360 60.3
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 8.2e-113 411.8 368 59.8
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 9.1e-112 408.3 351 63.0
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 7.4e-106 388.7 334 62.0
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 1.4e-104 384.4 424 51.9
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.2e-102 377.1 326 62.0
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.4e-99 367.9 305 60.7
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 9.7e-98 361.7 280 65.7
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 6.3e-97 359.0 409 47.7
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 1.2e-92 344.7 372 48.4
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 1.5e-90 337.8 435 44.6
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 7.5e-90 335.5 250 67.6
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 9.1e-88 328.6 328 57.9
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 2.0e-87 327.4 247 66.0
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 4.4e-82 309.7 321 52.6
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 1.6e-79 301.2 483 39.5
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 6.6e-78 295.8 234 65.0
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 4.3e-77 293.1 340 48.2
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 1.5e-69 268.1 376 42.3
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 7.5e-66 255.8 355 47.6
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 1.7e-65 254.6 319 44.2
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 8.3e-65 252.3 318 47.2
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 1.3e-62 245.0 312 47.8
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 9.5e-61 238.8 316 43.4
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 8.3e-57 225.7 203 60.1
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 1.7e-54 218.0 185 59.5
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 8.1e-52 209.1 232 50.9
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 3.9e-46 190.3 192 55.2
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.0e-38 164.1 142 62.0
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 2.1e-31 141.4 364 32.1
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 6.0e-31 139.8 130 61.5
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 1.2e-26 125.6 76 72.4
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 2.0e-26 124.8 84 72.6
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 2.9e-25 120.9 83 67.5
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 6.2e-20 103.2 72 69.4
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.4e-19 101.3 58 81.0
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 1.0e-17 95.9 72 65.3
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 4.6e-15 87.0 98 45.9
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 3.1e-11 74.3 77 50.6
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 4.5e-10 70.5 76 56.6
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 5.1e-06 57.0 34 73.5


User provided reference genes

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