Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.6e-199 699.1 337 100.0
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 7.7e-141 504.2 331 68.6
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 1.0e-140 503.8 334 69.5
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.7e-140 503.1 333 70.3
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 1.6e-138 496.5 335 67.2
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 4.7e-138 495.0 337 68.2
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 2.2e-135 486.1 339 67.0
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 3.8e-132 475.3 332 66.3
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.0e-129 467.2 333 64.3
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.2e-128 463.8 334 62.9
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.2e-128 463.8 332 63.9
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.0e-128 463.0 333 63.1
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 4.4e-128 461.8 332 63.0
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 5.7e-128 461.5 333 62.8
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.7e-127 459.9 332 62.7
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.2e-127 459.5 340 63.5
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 8.3e-127 457.6 335 63.6
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.4e-126 456.8 336 63.4
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.8e-126 456.4 341 63.3
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 3.1e-126 455.7 331 63.4
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 5.9e-125 451.4 340 64.1
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.0e-124 450.7 341 63.3
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.0e-124 450.7 339 63.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 1.7e-124 449.9 339 63.4
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.7e-124 449.9 342 61.4
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 2.2e-124 449.5 339 61.9
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.2e-124 449.5 339 62.5
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 5.0e-124 448.4 334 61.1
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 6.5e-124 448.0 337 62.3
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 3.2e-123 445.7 336 61.3
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 3.2e-123 445.7 339 61.1
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.2e-123 445.3 334 61.7
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 4.2e-123 445.3 334 61.4
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.5e-123 444.9 334 62.0
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.6e-122 443.4 334 61.7
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 1.6e-122 443.4 338 62.1
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.6e-122 442.2 334 62.6
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 6.1e-122 441.4 333 63.1
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.8e-121 439.9 336 61.0
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.8e-121 439.9 337 61.1
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 4.0e-121 438.7 331 60.4
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 4.0e-121 438.7 337 61.7
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 5.2e-121 438.3 333 60.4
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 5.2e-121 438.3 333 61.6
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 5.2e-121 438.3 340 61.2
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 8.8e-121 437.6 335 61.5
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 8.8e-121 437.6 335 61.5
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 2.6e-120 436.0 340 60.3
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 3.4e-120 435.6 333 61.6
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 4.4e-120 435.3 343 60.3
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 9.8e-120 434.1 335 61.5
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.3e-119 433.7 336 61.6
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 2.2e-119 433.0 337 59.9
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.8e-119 432.6 335 61.2
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 4.9e-119 431.8 335 60.3
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 6.3e-119 431.4 335 60.6
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.1e-118 430.6 338 60.4
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.8e-118 429.9 336 60.4
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 1.8e-118 429.9 335 60.3
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.8e-118 429.9 336 60.4
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 2.4e-118 429.5 332 61.4
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 2.4e-118 429.5 337 59.6
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 3.1e-118 429.1 331 61.6
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 3.1e-118 429.1 333 61.0
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 3.1e-118 429.1 339 60.2
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.4e-118 428.3 334 59.6
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 5.4e-118 428.3 338 58.0
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 7.0e-118 427.9 336 59.5
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 1.2e-117 427.2 333 60.4
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 1.2e-117 427.2 334 59.9
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 2.0e-117 426.4 338 59.5
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.7e-117 426.0 334 59.6
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.5e-117 425.6 335 59.7
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 3.5e-117 425.6 335 59.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.0e-116 424.1 338 57.4
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.3e-116 423.7 338 57.7
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 2.3e-116 422.9 336 57.4
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.9e-116 422.5 333 58.0
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 2.9e-116 422.5 333 58.9
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 5.0e-116 421.8 333 58.3
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 6.6e-116 421.4 337 59.3
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.6e-116 421.0 334 59.3
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 3.3e-115 419.1 331 59.5
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 4.2e-115 418.7 333 57.7
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.6e-115 418.3 334 59.0
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 2.1e-114 416.4 338 59.8
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.4e-113 413.7 338 59.8
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.3e-113 412.9 333 57.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 8.9e-113 411.0 368 55.4
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 3.7e-111 405.6 336 55.4
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 4.1e-110 402.1 379 51.5
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 2.0e-109 399.8 340 54.4
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 2.3e-108 396.4 336 58.3
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 3.9e-108 395.6 286 65.4
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 8.6e-108 394.4 329 54.1
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.1e-107 394.0 336 57.1
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 9.5e-107 391.0 374 51.9
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 6.2e-106 388.3 330 55.5
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 6.2e-106 388.3 334 53.9
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 2.3e-105 386.3 333 55.6
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.9e-103 379.4 330 55.2
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 3.2e-102 375.9 264 64.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 2.7e-101 372.9 428 46.0
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 2.7e-101 372.9 350 54.0
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.6e-93 347.1 338 50.6
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 4.3e-91 339.0 347 50.4
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 2.3e-89 333.2 255 61.6
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.2e-88 330.9 254 62.6
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.7e-85 319.7 287 55.7
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.7e-79 300.4 232 58.6
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.6e-77 292.4 226 61.5
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 6.0e-77 292.0 342 44.2
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.3e-74 284.3 183 70.5
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.7e-71 273.9 340 39.4
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 6.6e-68 261.9 338 41.4
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-62 244.2 199 60.8
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.1e-49 199.9 193 53.4
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 6.5e-47 192.2 183 54.6
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.9e-46 190.7 257 37.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 7.9e-45 185.3 184 53.3
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.7e-42 176.4 173 54.3
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.5e-40 171.0 166 54.2
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-38 164.9 200 45.5
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 3.7e-26 123.2 81 67.9
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 3.6e-21 106.7 129 40.3
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.7e-18 97.8 193 38.3
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 2.8e-18 97.1 78 62.8
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.1e-17 95.1 78 61.5
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.1e-17 93.2 78 61.5
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.2e-16 91.7 107 42.1
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.5e-16 90.1 72 58.3
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.5e-16 90.1 72 58.3
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.5e-16 90.1 72 58.3
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 2.9e-15 87.0 72 56.9
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.5e-11 74.7 51 62.7
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.5e-11 74.7 57 63.2
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.5e-11 74.7 51 62.7
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.7e-10 70.1 62 61.3
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.7e-08 63.9 68 45.6
FAN04G0473 Fragaria x ananassa HOM05D015355 ORTHO05D007549 7.7e-08 62.4 45 68.9


User provided reference genes

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