Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 0.0e+00 1103.6 565 100.0
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 4.8e-188 661.8 661 56.6
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 1.3e-177 627.1 671 53.9
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 4.9e-172 608.6 672 52.7
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 1.0e-169 600.9 656 53.0
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 5.6e-168 595.1 651 52.5
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 1.3e-164 583.9 712 50.0
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 1.1e-163 580.9 651 51.5
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 3.9e-161 572.4 509 58.3
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.6e-161 571.2 638 50.0
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 1.1e-160 570.9 657 51.1
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 2.5e-160 569.7 670 49.9
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 9.5e-160 567.8 664 47.7
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 1.8e-158 563.5 596 53.0
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 2.3e-158 563.1 717 47.0
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 3.1e-158 562.8 668 48.2
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 8.9e-158 561.2 728 47.0
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 4.4e-157 558.9 590 52.0
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 9.8e-157 557.8 672 49.3
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 1.3e-156 557.4 742 46.0
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 3.7e-156 555.8 711 47.3
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 8.3e-156 554.7 610 50.0
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 1.4e-155 553.9 670 49.4
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 2.4e-155 553.1 590 51.0
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.0e-154 550.1 647 49.8
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 2.0e-154 550.1 658 48.8
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 4.6e-154 548.9 654 49.2
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 1.0e-153 547.7 666 47.3
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.3e-153 547.4 708 45.9
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 1.7e-153 547.0 663 48.9
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 3.0e-153 546.2 633 48.7
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 3.9e-153 545.8 649 49.5
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 5.0e-153 545.4 634 50.3
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 8.6e-153 544.7 637 49.5
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 5.6e-152 542.0 652 47.4
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 9.5e-152 541.2 628 48.7
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 2.8e-151 539.7 703 46.7
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 3.1e-150 536.2 669 48.3
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 4.0e-150 535.8 648 48.1
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.2e-148 530.0 714 44.7
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 7.1e-147 525.0 653 46.1
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 3.5e-146 522.7 615 51.4
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 4.6e-146 522.3 600 48.7
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.3e-145 520.8 589 49.1
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 2.3e-145 520.0 579 49.1
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 3.0e-145 519.6 625 47.4
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 5.1e-145 518.8 647 48.1
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 6.6e-145 518.5 680 45.1
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 8.6e-145 518.1 574 49.1
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 1.1e-144 517.7 675 45.2
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 2.5e-144 516.5 748 43.3
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 5.6e-144 515.4 667 46.6
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 1.2e-143 514.2 619 47.2
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 1.6e-143 513.8 666 45.9
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 2.1e-143 513.5 573 49.2
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 3.6e-143 512.7 598 48.3
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 4.7e-143 512.3 601 47.4
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 6.2e-143 511.9 669 46.0
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 1.1e-142 511.1 666 46.1
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 1.4e-142 510.8 633 47.7
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 2.0e-141 506.9 614 45.8
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 2.6e-141 506.5 661 45.7
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 3.4e-141 506.1 667 45.3
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 1.7e-140 503.8 674 46.7
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.4e-140 501.9 571 49.0
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 4.1e-139 499.2 601 46.3
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 4.1e-139 499.2 670 44.9
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 6.6e-137 491.9 713 42.6
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 6.6e-137 491.9 580 48.1
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 1.7e-132 477.2 617 46.5
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 2.9e-132 476.5 711 43.9
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 7.1e-131 471.9 609 44.7
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 1.2e-125 454.5 552 47.3
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 1.4e-123 447.6 487 50.7
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 1.9e-123 447.2 513 49.5
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 3.5e-122 443.0 519 48.0
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 4.3e-120 436.0 934 33.5
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 9.6e-120 434.9 612 43.0
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 3.7e-119 433.0 495 50.5
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 8.1e-119 431.8 622 44.1
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 4.0e-118 429.5 548 46.5
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 6.9e-118 428.7 535 46.9
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.4e-117 426.4 493 50.5
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 3.8e-116 422.9 533 46.5
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 4.2e-115 419.5 499 48.5
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 7.1e-115 418.7 533 47.3
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.3e-111 407.9 463 48.2
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 1.6e-111 407.5 560 44.6
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.1e-107 394.8 493 47.1
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 2.5e-107 393.7 438 48.2
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 4.6e-106 389.4 484 46.3
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 4.3e-104 382.9 574 42.0
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 2.4e-102 377.1 595 42.0
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.3e-97 361.3 512 42.6
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 1.2e-90 338.2 665 36.5
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 1.4e-81 308.1 361 50.1
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 8.5e-76 288.9 412 43.2
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 9.4e-67 258.8 228 56.1
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.8e-65 254.6 255 51.8
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 3.3e-59 233.8 240 54.2
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 1.2e-58 231.9 260 51.5
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 4.7e-58 229.9 248 51.2
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.0e-57 228.8 221 56.1
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 9.2e-54 215.7 239 51.0
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.5e-48 198.4 565 31.3
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 1.5e-48 198.4 235 49.8
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 1.0e-44 185.7 184 54.3
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 5.8e-40 169.9 364 33.8
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 8.3e-39 166.0 177 53.1
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 8.9e-33 146.0 204 42.6
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.4e-32 144.1 117 64.1
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 4.9e-31 140.2 190 46.3
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 1.1e-30 139.0 209 38.8
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.7e-28 131.7 118 58.5
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.4e-24 117.5 82 73.2
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 8.4e-23 112.8 134 52.2
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.6e-21 107.1 145 43.4
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.0e-20 104.4 166 42.8
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 2.5e-19 101.3 62 77.4
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 1.2e-18 99.0 160 40.6
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.4e-17 95.5 113 48.7
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 2.0e-16 91.7 119 46.2
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 2.1e-13 81.6 63 57.1
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 2.7e-13 81.3 132 34.1
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 5.1e-12 77.0 90 45.6
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 4.0e-09 67.4 147 28.6
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 2.6e-08 64.7 71 49.3


User provided reference genes

Program Settings