Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9680 Utricularia gibba HOM05D007202 ORTHO05D009125 4.1e-133 478.0 235 100.0
Migut.I00254 Erythranthe guttata HOM05D007202 ORTHO05D009125 9.6e-74 280.8 243 57.6
SalBow5G0881 Salvia bowleyana HOM05D007202 ORTHO05D009125 9.0e-64 247.7 245 53.1
SalBow5G3041 Salvia bowleyana HOM05D007202 ORTHO05D009125 9.0e-64 247.7 245 53.1
SGA_v2.0_scaffold102G29846 Striga asiatica HOM05D007202 ORTHO05D009125 3.2e-61 239.2 243 52.3
MSTRG.22930 Avicennia marina HOM05D007202 ORTHO05D009125 1.1e-50 204.1 243 45.3
Lj3C848G3 Lonicera japonica HOM05D007202 ORTHO05D009125 9.4e-45 184.5 224 45.1
Oeu037581.1 Olea europaea HOM05D007202 ORTHO05D009125 5.2e-43 178.7 238 40.3
TAR622G0387 Trochodendron aralioides HOM05D007202 ORTHO05D009125 2.2e-41 173.3 239 43.5
Nitab4.5_0009973g0040 Nicotiana tabacum HOM05D007202 ORTHO05D009125 1.7e-38 163.7 238 39.9
Nitab4.5_0006691g0020 Nicotiana tabacum HOM05D007202 ORTHO05D009125 1.9e-37 160.2 238 38.2
Sopen04g004350 Solanum pennellii HOM05D007202 ORTHO05D009125 1.2e-36 157.5 238 38.2
Peaxi162Scf00681g00018 Petunia axillaris HOM05D007202 ORTHO05D009125 8.0e-36 154.8 239 36.8
Solyc04g009220.2 Solanum lycopersicum HOM05D007202 ORTHO05D009125 8.0e-36 154.8 238 37.8
Dinv07882 Davidia involucrata HOM05D007202 ORTHO05D009125 1.4e-35 154.1 127 59.1
CSS0048316 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 3.0e-35 152.9 131 58.0
PGSC0003DMG400032545 Solanum tuberosum HOM05D007202 ORTHO05D009125 4.0e-35 152.5 238 37.4
Cc07_g16390 Coffea canephora HOM05D007202 ORTHO05D009125 5.2e-35 152.1 118 61.9
CSS0032654 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 6.8e-35 151.8 131 57.3
CAN.G619.3 Capsicum annuum HOM05D007202 ORTHO05D009125 3.4e-34 149.4 239 36.8
Eucgr.J00877 Eucalyptus grandis HOM05D007202 ORTHO05D009125 3.4e-34 149.4 132 56.1
TPR.G4127 Trifolium pratense HOM05D007202 ORTHO05D009125 4.4e-34 149.1 152 48.0
Medtr1g114190 Medicago truncatula HOM05D000730 ORTHO05D009125 5.7e-34 148.7 153 48.4
GSVIVG01026178001 Vitis vinifera HOM05D007202 ORTHO05D009125 7.5e-34 148.3 131 55.7
EL10Ac9g22973 Beta vulgaris HOM05D007202 ORTHO05D009125 9.8e-34 147.9 132 56.1
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 1.3e-33 147.5 132 53.8
AUR62017720 Chenopodium quinoa HOM05D007202 ORTHO05D009125 3.7e-33 146.0 132 54.5
Ca_11225_v3 Cicer arietinum L. HOM05D007202 ORTHO05D009125 4.8e-33 145.6 154 46.1
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 4.8e-33 145.6 128 57.0
Prupe.7G271800 Prunus persica HOM05D007202 ORTHO05D009125 6.3e-33 145.2 245 37.1
Cfa008759 Carpinus fangiana HOM05D007202 ORTHO05D009125 5.4e-32 142.1 125 55.2
Glyma.20G104200 Glycine max HOM05D007202 ORTHO05D009125 5.4e-32 142.1 126 52.4
Psat6g233440 Pisum sativum HOM05D007202 ORTHO05D009125 5.4e-32 142.1 223 38.1
ClCG01G011360 Citrullus lanatus HOM05D007202 ORTHO05D009125 7.0e-32 141.7 138 49.3
Ciclev10030697m.g Citrus clementina HOM05D007202 ORTHO05D009125 7.0e-32 141.7 249 34.5
Manes.10G042000 Manihot esculenta HOM05D007202 ORTHO05D009125 7.0e-32 141.7 130 55.4
Ah.03g147890 Amaranthus hybridus HOM05D007202 ORTHO05D009125 1.2e-31 141.0 128 56.2
vmacro08165 Vaccinium macrocarpon HOM05D007202 ORTHO05D009125 1.2e-31 141.0 122 59.8
QL12p025863 Quercus lobata HOM05D007202 ORTHO05D009125 1.6e-31 140.6 249 33.3
ClCG01G011340 Citrullus lanatus HOM05D007202 ORTHO05D009125 2.0e-31 140.2 132 50.8
FAN12G3533 Fragaria x ananassa HOM05D007202 ORTHO05D009125 2.7e-31 139.8 122 54.9
FAN12G2678 Fragaria x ananassa HOM05D007202 ORTHO05D009125 5.9e-31 138.7 122 54.9
Phvul.007G015700 Phaseolus vulgaris HOM05D007202 ORTHO05D009125 5.9e-31 138.7 125 51.2
Sc10g0006710 Simmondsia chinensis HOM05D007202 ORTHO05D009125 1.0e-30 137.9 244 34.4
Rhsim09G0070400 Rhododendron simsii HOM05D007202 ORTHO05D009125 1.3e-30 137.5 122 56.6
Atru.chr11.1126 Acer truncatum HOM05D007202 ORTHO05D009125 1.7e-30 137.1 124 54.0
RcHm_v2.0_Chr4g0408911 Rosa chinensis HOM05D007202 ORTHO05D009125 1.7e-30 137.1 249 34.5
Hund26048 Selenicereus undatus HOM05D007202 ORTHO05D009125 1.7e-30 137.1 132 51.5
Haze_11774 Corylus avellana HOM05D007202 ORTHO05D009125 2.2e-30 136.7 124 54.0
FvH4_4g11722 Fragaria vesca HOM05D007202 ORTHO05D009125 2.2e-30 136.7 122 54.1
FvH4_4g11723 Fragaria vesca HOM05D007202 ORTHO05D009125 2.2e-30 136.7 122 54.1
FAN07G0522 Fragaria x ananassa HOM05D007202 ORTHO05D009125 2.9e-30 136.3 122 54.9
Aqoxy6G00861 Aquilegia oxysepala HOM05D007202 ORTHO05D009125 3.8e-30 136.0 122 52.5
Potri.005G090600 Populus trichocarpa HOM05D007202 ORTHO05D009125 5.0e-30 135.6 249 33.7
Sabra05G0074700 Salix brachista HOM05D007202 ORTHO05D009125 6.5e-30 135.2 249 33.3
Gohir.A03G165700 Gossypium hirsutum HOM05D007202 ORTHO05D009125 1.1e-29 134.4 121 54.5
CiPaw.06G061800 Carya illinoinensis HOM05D007202 ORTHO05D009125 1.5e-29 134.0 118 52.5
Lj5g0012863 Lotus japonicus HOM05D007202 ORTHO05D009125 2.5e-29 133.3 125 48.8
Actinidia21102 Actinidia chinensis HOM05D007202 ORTHO05D009125 7.2e-29 131.7 113 56.6
PSO782G4392 Papaver somniferum HOM05D007202 ORTHO05D009125 1.6e-28 130.6 118 55.9
THA.LOC104800801 Tarenaya hassleriana HOM05D007202 ORTHO05D009125 2.7e-28 129.8 124 52.4
PSO063G1738 Papaver somniferum HOM05D007202 ORTHO05D009125 3.6e-28 129.4 117 55.6
Duzib132G0783 Durio zibethinus HOM05D007202 ORTHO05D009125 4.7e-28 129.0 118 55.1
VMungo0720G1420 Vigna mungo HOM05D007202 ORTHO05D009125 4.7e-28 129.0 126 48.4
Sp6g34640 Schrenkiella parvula HOM05D007202 ORTHO05D009125 1.8e-27 127.1 123 52.0
AL6G18720 Arabidopsis lyrata HOM05D007202 ORTHO05D009125 2.3e-27 126.7 124 53.2
AT5G08310 Arabidopsis thaliana HOM05D007202 ORTHO05D009125 3.0e-27 126.3 124 52.4
Thhalv10015588m.g Eutrema salsugineum HOM05D007202 ORTHO05D009125 4.0e-27 125.9 125 52.0
CANSAT54G1393 Cannabis sativa HOM05D007202 ORTHO05D009125 1.2e-26 124.4 125 48.8
CsaV3_5G014410 Cucumis sativus L. HOM05D007202 ORTHO05D009125 1.2e-26 124.4 119 47.9
DCAR_026889 Daucus carota HOM05D007202 ORTHO05D009125 1.5e-26 124.0 118 50.8
C09p68630 Brassica napus HOM05D007202 ORTHO05D009125 2.0e-26 123.6 122 50.0
Aa31LG3G18260 Aethionema arabicum HOM05D007202 ORTHO05D009766 2.6e-26 123.2 124 50.0
BraA10t44884Z Brassica rapa HOM05D007202 ORTHO05D009125 3.4e-26 122.9 122 50.0
BolC9t59607H Brassica oleracea HOM05D007202 ORTHO05D009125 4.4e-26 122.5 122 49.2
HanXRQChr13g0392131 Helianthus annuus HOM05D007202 ORTHO05D009125 5.7e-26 122.1 113 53.1
Thecc.02G157500 Theobroma cacao HOM05D007202 ORTHO05D009125 7.5e-26 121.7 108 53.7
A10p28370 Brassica napus HOM05D007202 ORTHO05D009125 1.3e-25 120.9 123 48.8
CARHR204810 Cardamine hirsuta HOM05D007202 ORTHO05D009125 1.7e-25 120.6 123 48.8
arahy.Tifrunner.gnm1.ann1.EU7MKH Arachis hypogaea HOM05D007202 ORTHO05D009125 2.8e-25 119.8 116 47.4
TWI53G0827 Tripterygium wilfordii HOM05D007202 ORTHO05D009125 3.7e-25 119.4 248 31.5
Carub.0006s0720 Capsella rubella HOM05D007202 ORTHO05D009125 4.9e-25 119.0 126 50.0
arahy.Tifrunner.gnm1.ann1.U9PBTF Arachis hypogaea HOM05D007202 ORTHO05D009125 2.4e-24 116.7 108 48.1
MBI07_g03828_MAGBIO Magnolia biondii HOM05D007202 ORTHO05D009125 1.2e-23 114.4 114 49.1
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 1.6e-23 114.0 92 57.6
Lalb_Chr02g0143591 Lupinus albus HOM05D007202 ORTHO05D009125 1.7e-22 110.5 108 50.9
HPP92_022482 Vanilla planifolia HOM05D007202 ORTHO05D009125 1.7e-22 110.5 112 46.4
SEGI_11175 Sequoiadendron giganteum HOM05D007202 ORTHO05D009125 1.9e-21 107.1 119 43.7
Sed0015759 Sechium edule HOM05D007202 ORTHO05D009125 4.3e-21 105.9 119 46.2
ECA233G0992 Erigeron canadensis HOM05D000200 ORTHO05D001546 5.6e-21 105.5 119 44.5
Hma1.2p1_2428F.1_g321970 Hydrangea macrophylla HOM05D007202 ORTHO05D009125 3.6e-20 102.8 249 29.3
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 3.0e-19 99.8 116 40.5
CAN.G298.25 Capsicum annuum HOM05D007202 ORTHO05D009125 1.2e-18 97.8 134 39.6
CDE05G0100 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.2e-18 97.8 112 40.2
PGR142G1500 Punica granatum HOM05D007202 ORTHO05D009125 3.7e-17 92.8 139 37.4
ATR1149G109 Amborella trichopoda HOM05D007202 ORTHO05D009125 7.0e-16 88.6 114 38.6
ATR0712G074 Amborella trichopoda HOM05D007202 ORTHO05D009125 5.9e-15 85.5 89 44.9
Lsat_1_v5_gn_8_33340 Lactuca sativa HOM05D004281 ORTHO05D004839 8.9e-11 71.6 119 37.0
BcaC03g13219 Brassica carinata HOM05D007202 ORTHO05D009125 2.0e-10 70.5 88 43.2
QL03p045855 Quercus lobata HOM05D007202 ORTHO05D009125 8.3e-09 65.1 137 29.2
Gohir.D07G165100 Gossypium hirsutum HOM05D008810 ORTHO05D010971 2.7e-07 60.1 154 29.2
Os01g0280400 Oryza sativa ssp. japonica HOM05D002649 ORTHO05D002838 4.6e-07 59.3 162 29.0
Os12g0170100 Oryza sativa ssp. japonica HOM05D002649 ORTHO05D002838 6.0e-07 58.9 163 28.8
Gorai.001G188700 Gossypium raimondii HOM05D008810 ORTHO05D010971 1.0e-06 58.2 154 28.6
AL8G21830 Arabidopsis lyrata HOM05D001779 ORTHO05D001753 2.3e-06 57.0 97 32.0
TPR.G34635 Trifolium pratense HOM05D002649 ORTHO05D002838 2.3e-06 57.0 161 24.8
AT5G48730 Arabidopsis thaliana HOM05D001779 ORTHO05D001753 3.9e-06 56.2 97 32.0
Glyma.16G058400 Glycine max HOM05D000424 ORTHO05D008586 6.6e-06 55.5 151 26.5
CANSAT80G1535 Cannabis sativa HOM05D000424 ORTHO05D000355 8.6e-06 55.1 152 28.9


User provided reference genes

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