Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9660 Utricularia gibba HOM05D008195 ORTHO05D000743 2.6e-149 531.9 258 100.0
unitig_749.g13437 Utricularia gibba HOM05D008195 ORTHO05D000743 7.4e-51 204.9 280 42.9
SGA_v2.0_scaffold313G48311 Striga asiatica HOM05D001093 ORTHO05D000743 1.1e-17 94.7 82 50.0
SalBow5G5623 Salvia bowleyana HOM05D001093 ORTHO05D000743 1.5e-14 84.3 81 43.2
MSTRG.22985 Avicennia marina HOM05D001093 ORTHO05D000743 4.7e-13 79.3 81 46.9
Migut.I00329 Erythranthe guttata HOM05D001093 ORTHO05D000743 4.7e-13 79.3 88 39.8
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 1.8e-12 77.4 286 24.1
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 3.0e-12 76.6 84 39.3
PGSC0003DMG400041231 Solanum tuberosum HOM05D008195 ORTHO05D010950 4.0e-12 76.3 271 27.7
Oeu047262.2 Olea europaea HOM05D001093 ORTHO05D000743 8.8e-12 75.1 83 38.6
Actinidia35035 Actinidia chinensis HOM05D001093 ORTHO05D000743 2.6e-11 73.6 84 38.1
PGSC0003DMG400024640 Solanum tuberosum HOM05D008195 ORTHO05D000743 4.4e-11 72.8 193 29.0
vmacro17606 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 4.4e-11 72.8 92 37.0
CAN.G111.39 Capsicum annuum HOM05D008195 ORTHO05D000743 5.7e-11 72.4 100 34.0
Rhsim08G0146400 Rhododendron simsii HOM05D001093 ORTHO05D000743 5.7e-11 72.4 84 38.1
Cc00_g03840 Coffea canephora HOM05D001093 ORTHO05D000743 2.2e-10 70.5 81 40.7
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 2.2e-10 70.5 93 38.7
Dinv17406 Davidia involucrata HOM05D001093 ORTHO05D000743 2.8e-10 70.1 297 24.6
Rhsim12G0151100 Rhododendron simsii HOM05D001093 ORTHO05D000743 2.8e-10 70.1 93 37.6
Lj5A103G64 Lonicera japonica HOM05D001093 ORTHO05D000743 3.7e-10 69.7 84 39.3
AUR62021572 Chenopodium quinoa HOM05D001093 ORTHO05D000743 6.3e-10 68.9 89 32.6
AUR62008519 Chenopodium quinoa HOM05D001093 ORTHO05D000743 8.3e-10 68.6 89 32.6
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 1.4e-09 67.8 83 36.1
Nitab4.5_0007689g0050 Nicotiana tabacum HOM05D008195 ORTHO05D000743 1.8e-09 67.4 304 24.3
TAR264G0006 Trochodendron aralioides HOM05D001093 ORTHO05D000743 2.4e-09 67.0 82 37.8
ECA247G2835 Erigeron canadensis HOM05D001093 ORTHO05D000743 3.1e-09 66.6 82 41.5
Solyc03g115160.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 7.0e-09 65.5 131 31.3
TAR629G2812 Trochodendron aralioides HOM05D001093 ORTHO05D000743 9.1e-09 65.1 82 37.8
Nitab4.5_0001485g0150 Nicotiana tabacum HOM05D008195 ORTHO05D000743 1.2e-08 64.7 91 35.2
Peaxi162Scf00201g00235 Petunia axillaris HOM05D008195 ORTHO05D000743 1.2e-08 64.7 88 36.4
EL10Ac5g11120 Beta vulgaris HOM05D015602 ORTHO05D006373 2.0e-08 63.9 83 31.3
Nn3g17441 Nelumbo nucifera HOM05D001093 ORTHO05D000743 2.0e-08 63.9 82 36.6
Sopen03g034220 Solanum pennellii HOM05D008195 ORTHO05D000743 2.7e-08 63.5 289 24.2
TAR629G0348 Trochodendron aralioides HOM05D001391 ORTHO05D000743 4.5e-08 62.8 121 32.2
Haze_07687 Corylus avellana HOM05D007909 ORTHO05D000743 1.0e-07 61.6 83 38.6
ATR0064G095 Amborella trichopoda HOM05D001093 ORTHO05D000743 1.3e-07 61.2 84 38.1
CAN.G675.32 Capsicum annuum HOM05D008195 ORTHO05D010950 1.3e-07 61.2 118 31.4
TWI60G1066 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 2.2e-07 60.5 80 36.2
Cfa019304 Carpinus fangiana HOM05D001093 ORTHO05D000743 2.9e-07 60.1 254 25.2
Solyc06g066140.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 2.9e-07 60.1 256 26.2
Sopen06g021660 Solanum pennellii HOM05D000006 ORTHO05D000001 2.9e-07 60.1 124 28.2
Haze_07714 Corylus avellana HOM05D007909 ORTHO05D000743 8.5e-07 58.5 83 37.3
Sopen06g021820 Solanum pennellii HOM05D008195 ORTHO05D000743 8.5e-07 58.5 82 35.4
Atru.chr9.429 Acer truncatum HOM05D007909 ORTHO05D000743 1.1e-06 58.2 56 44.6
CiPaw.12G008400 Carya illinoinensis HOM05D007909 ORTHO05D000743 1.1e-06 58.2 83 36.1
PGSC0003DMG401020463 Solanum tuberosum HOM05D008195 ORTHO05D010950 1.1e-06 58.2 260 25.4
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 1.5e-06 57.8 80 37.5
Actinidia27478 Actinidia chinensis HOM05D001093 ORTHO05D000743 1.9e-06 57.4 81 33.3
Solyc06g066200.2 Solanum lycopersicum HOM05D008195 ORTHO05D000743 2.5e-06 57.0 257 23.7
Sopen06g024280 Solanum pennellii HOM05D008195 ORTHO05D000743 2.5e-06 57.0 59 40.7
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 3.2e-06 56.6 54 44.4
DCAR_007194 Daucus carota HOM05D001093 ORTHO05D000743 4.2e-06 56.2 80 32.5
Solyc01g010500.3 Solanum lycopersicum HOM05D001818 ORTHO05D001780 4.2e-06 56.2 53 39.6
Sopen06g024610 Solanum pennellii HOM05D008195 ORTHO05D000743 5.5e-06 55.8 158 27.8
ATR0772G157 Amborella trichopoda HOM05D001093 ORTHO05D000743 7.2e-06 55.5 80 33.8
Glyma.06G202900 Glycine max HOM05D007909 ORTHO05D000743 7.2e-06 55.5 82 31.7
Glyma.06G203100 Glycine max HOM05D007909 ORTHO05D000743 7.2e-06 55.5 82 31.7
Duzib205G1796 Durio zibethinus HOM05D001093 ORTHO05D010605 9.4e-06 55.1 55 41.8


User provided reference genes

Program Settings