Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 1.5e-48 196.1 110 100.0
unitig_749.g13516 Utricularia gibba HOM05D005475 ORTHO05D006575 2.5e-32 142.1 104 71.2
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 2.6e-13 79.0 113 46.0
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 1.4e-11 73.2 109 42.2
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 3.2e-11 72.0 46 71.7
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 7.1e-11 70.9 113 42.5
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.6e-10 69.7 46 67.4
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 1.6e-10 69.7 46 71.7
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.6e-10 69.7 45 68.9
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.6e-10 69.7 113 40.7
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.1e-10 69.3 46 67.4
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 2.1e-10 69.3 46 67.4
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 2.1e-10 69.3 97 45.4
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 3.5e-10 68.6 45 71.1
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 3.5e-10 68.6 46 69.6
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.6e-10 68.2 110 38.2
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 6.0e-10 67.8 46 65.2
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 6.0e-10 67.8 46 69.6
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 6.0e-10 67.8 46 69.6
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 6.0e-10 67.8 46 67.4
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 7.8e-10 67.4 46 65.2
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 7.8e-10 67.4 46 65.2
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 7.8e-10 67.4 95 44.2
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.0e-09 67.0 46 67.4
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.0e-09 67.0 93 43.0
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.0e-09 67.0 46 65.2
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 1.3e-09 66.6 46 65.2
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.3e-09 66.6 44 68.2
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.3e-09 66.6 44 68.2
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.7e-09 66.2 47 70.2
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.7e-09 66.2 93 40.9
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-09 65.9 47 70.2
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-09 65.9 47 70.2
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 2.3e-09 65.9 46 63.0
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 3.0e-09 65.5 96 42.7
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 3.9e-09 65.1 44 65.9
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 3.9e-09 65.1 45 64.4
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 6.6e-09 64.3 46 67.4
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 6.6e-09 64.3 46 65.2
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 6.6e-09 64.3 46 65.2
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 8.7e-09 63.9 46 65.2
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 1.5e-08 63.2 46 60.9
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.5e-08 63.2 46 58.7
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.5e-08 63.2 46 58.7
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.9e-08 62.8 45 64.4
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.5e-08 62.4 44 65.9
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 2.5e-08 62.4 46 63.0
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 4.3e-08 61.6 46 65.2
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 4.3e-08 61.6 44 65.9
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 5.6e-08 61.2 85 43.5
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 2.1e-07 59.3 101 39.6
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 2.1e-07 59.3 46 56.5
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 2.1e-07 59.3 46 56.5
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.1e-07 59.3 80 42.5
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 2.8e-07 58.9 45 57.8
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 2.8e-07 58.9 46 58.7
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 3.6e-07 58.5 83 41.0
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 56.5
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 54.3
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 56.5
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 56.5
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 54.3
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 56.5
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 4.8e-07 58.2 46 58.7
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 4.8e-07 58.2 44 63.6
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 6.2e-07 57.8 46 56.5
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 6.2e-07 57.8 46 58.7
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 6.2e-07 57.8 46 56.5
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 6.2e-07 57.8 46 58.7
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 6.2e-07 57.8 46 58.7
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 6.2e-07 57.8 44 61.4
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 6.2e-07 57.8 47 53.2
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 6.2e-07 57.8 44 61.4
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 8.1e-07 57.4 45 53.3
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 8.1e-07 57.4 46 58.7
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.4e-06 56.6 46 56.5
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.4e-06 56.6 46 56.5
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.4e-06 56.6 46 54.3
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.4e-06 56.6 43 65.1
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 1.8e-06 56.2 46 54.3
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 1.8e-06 56.2 46 54.3
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.8e-06 56.2 45 62.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 1.8e-06 56.2 109 38.5
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 3.1e-06 55.5 109 33.9
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 3.1e-06 55.5 97 40.2
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 4.0e-06 55.1 46 54.3
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 5.3e-06 54.7 45 53.3
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 5.3e-06 54.7 80 41.2
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 5.3e-06 54.7 95 38.9
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 9.0e-06 53.9 43 58.1
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 9.0e-06 53.9 93 38.7


User provided reference genes

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