Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 7.4e-164 580.5 294 100.0
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 1.8e-24 117.5 308 33.8
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 6.5e-19 99.0 242 35.1
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 6.5e-19 99.0 242 35.1
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 8.5e-19 98.6 213 35.7
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 1.4e-18 97.8 217 35.0
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 9.4e-18 95.1 194 35.1
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 1.6e-17 94.4 193 34.2
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 3.6e-17 93.2 201 35.8
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 3.6e-17 93.2 194 34.5
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 4.7e-17 92.8 194 33.5
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.7e-17 92.8 219 37.0
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 6.1e-17 92.4 201 35.8
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.9e-17 92.0 205 38.5
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 1.4e-16 91.3 213 34.7
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 3.0e-16 90.1 210 33.8
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 3.0e-16 90.1 226 36.7
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 3.9e-16 89.7 213 34.7
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 5.2e-16 89.4 205 37.1
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 5.2e-16 89.4 203 35.5
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 8.8e-16 88.6 201 34.8
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.1e-15 88.2 263 33.5
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.1e-15 88.2 215 34.0
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 1.5e-15 87.8 203 33.5
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 2.0e-15 87.4 205 34.6
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 3.3e-15 86.7 258 31.4
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 1.7e-14 84.3 196 32.1
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 3.7e-14 83.2 220 33.2
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 4.8e-14 82.8 195 29.7
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 6.3e-14 82.4 191 31.9
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 8.2e-14 82.0 239 29.3
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 8.2e-14 82.0 202 32.2
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.1e-13 81.6 218 33.9
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 1.4e-13 81.3 198 33.3
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 1.8e-13 80.9 221 31.2
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 2.4e-13 80.5 208 32.2
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 2.4e-13 80.5 193 31.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 3.1e-13 80.1 187 34.2
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 3.1e-13 80.1 200 30.5
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 3.1e-13 80.1 188 35.1
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 3.1e-13 80.1 205 35.1
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 3.1e-13 80.1 208 33.2
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 3.1e-13 80.1 206 30.6
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 4.1e-13 79.7 196 30.6
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 9.1e-13 78.6 192 33.3
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 9.1e-13 78.6 194 30.9
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.6e-12 77.8 192 33.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 1.6e-12 77.8 211 34.6
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 2.0e-12 77.4 199 33.7
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 2.0e-12 77.4 201 32.3
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 2.6e-12 77.0 209 32.1
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 4.5e-12 76.3 201 30.3
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 4.5e-12 76.3 192 29.7
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 4.5e-12 76.3 198 31.8
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.9e-12 75.9 184 32.1
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 1.0e-11 75.1 197 32.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.0e-11 75.1 197 28.9
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 1.0e-11 75.1 258 31.4
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 1.3e-11 74.7 199 31.2
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.9e-11 73.6 204 29.9
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.8e-11 73.2 261 31.0
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 5.0e-11 72.8 200 31.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.0e-11 72.8 184 31.5
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 6.5e-11 72.4 205 29.8
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 6.5e-11 72.4 258 30.6
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 8.5e-11 72.0 204 30.4
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 8.5e-11 72.0 197 33.5
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 8.5e-11 72.0 256 28.5
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 8.5e-11 72.0 196 34.2
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-10 71.6 204 31.9
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-10 71.6 227 28.6
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.1e-10 71.6 197 32.5
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 1.5e-10 71.2 199 30.2
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 1.5e-10 71.2 185 33.5
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.9e-10 70.9 189 31.7
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.9e-10 70.9 189 31.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.5e-10 70.5 184 32.1
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 2.5e-10 70.5 182 30.8
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 4.2e-10 69.7 126 38.1
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 4.2e-10 69.7 63 57.1
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 5.5e-10 69.3 181 30.4
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 7.2e-10 68.9 205 29.3
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 9.4e-10 68.6 195 29.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-09 68.2 126 37.3
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.2e-09 68.2 228 28.9
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 1.6e-09 67.8 182 31.9
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.6e-09 67.8 196 29.6
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 1.6e-09 67.8 185 30.8
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 2.1e-09 67.4 216 29.6
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 2.1e-09 67.4 199 31.2
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.7e-09 67.0 225 28.4
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 2.7e-09 67.0 188 29.3
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 4.7e-09 66.2 188 32.4
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 8.0e-09 65.5 183 31.1
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 1.8e-08 64.3 85 42.4
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 2.3e-08 63.9 154 31.2
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 3.0e-08 63.5 201 29.9
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 4.0e-08 63.2 187 32.1
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 5.2e-08 62.8 204 28.4
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 6.7e-08 62.4 134 31.3
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 6.7e-08 62.4 223 25.6
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 1.2e-07 61.6 178 30.9
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 1.2e-07 61.6 180 31.7
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.5e-07 61.2 203 28.6
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 2.0e-07 60.8 222 28.4
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 2.6e-07 60.5 134 28.4
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 3.3e-07 60.1 185 31.9
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 3.3e-07 60.1 61 49.2
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.4e-07 59.7 193 29.5
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 5.7e-07 59.3 189 29.1
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 7.5e-07 58.9 195 28.7
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 9.7e-07 58.5 201 29.9
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 2.2e-06 57.4 175 28.0
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 4.8e-06 56.2 63 50.8


User provided reference genes

Program Settings