Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 3.0e-97 358.6 192 100.0
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 3.0e-25 119.4 197 39.6
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.0e-25 119.0 197 39.6
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 7.5e-24 114.8 185 38.4
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 7.5e-24 114.8 221 35.7
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 5.4e-22 108.6 221 36.7
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 2.7e-21 106.3 207 35.7
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 5.9e-21 105.1 189 37.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 7.7e-21 104.8 179 37.4
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.3e-20 104.0 186 36.0
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.3e-20 104.0 200 38.5
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 2.3e-20 103.2 224 36.2
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 2.3e-20 103.2 203 33.5
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 3.8e-20 102.4 199 37.2
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 5.0e-20 102.1 200 35.5
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.5e-19 100.5 194 36.1
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.5e-19 100.5 221 33.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.9e-19 100.1 217 33.2
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.9e-19 100.1 188 39.4
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.3e-19 99.4 194 35.6
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 7.2e-19 98.2 199 34.7
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.6e-18 97.1 219 29.2
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 2.8e-18 96.3 193 37.3
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 2.8e-18 96.3 183 37.7
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 3.6e-18 95.9 204 32.4
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 3.6e-18 95.9 206 33.0
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.1e-18 95.1 215 34.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 6.1e-18 95.1 226 33.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 6.1e-18 95.1 222 32.0
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 6.1e-18 95.1 191 34.6
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 8.0e-18 94.7 202 33.7
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.8e-17 93.6 203 32.0
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.3e-17 93.2 198 33.3
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 6.8e-17 91.7 205 33.2
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 6.8e-17 91.7 227 32.6
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 6.8e-17 91.7 215 33.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 6.8e-17 91.7 200 34.0
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 8.9e-17 91.3 186 36.0
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.2e-16 90.9 205 32.7
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.0e-16 90.1 214 30.8
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.0e-16 90.1 232 31.0
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-16 90.1 209 33.5
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.4e-16 89.4 211 32.2
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.4e-16 89.0 232 30.6
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 4.4e-16 89.0 204 32.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 4.4e-16 89.0 203 32.5
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.4e-16 89.0 226 32.3
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 5.7e-16 88.6 223 31.8
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 9.8e-16 87.8 233 30.5
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-15 87.4 233 30.5
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.7e-15 87.0 232 30.6
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.7e-15 87.0 217 31.3
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.2e-15 86.7 220 30.5
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 4.9e-15 85.5 236 30.5
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.1e-14 84.3 222 31.5
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.8e-14 83.6 203 30.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.8e-14 83.6 208 29.8
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.4e-14 83.2 212 28.3
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.1e-14 82.8 203 32.5
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.1e-14 82.4 212 32.1
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 7.0e-14 81.6 206 32.5
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 7.0e-14 81.6 223 29.1
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 9.2e-14 81.3 189 34.9
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.2e-13 80.9 219 30.6
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.6e-13 80.5 181 30.4
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.6e-13 80.5 210 31.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 2.0e-13 80.1 210 31.4
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 2.0e-13 80.1 197 33.0
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 4.5e-13 79.0 219 32.4
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.0e-12 77.8 264 27.3
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.0e-12 77.8 197 31.5
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.0e-12 77.8 210 31.4
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.3e-12 76.6 169 32.5
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 2.9e-12 76.3 222 29.7
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 2.9e-12 76.3 180 31.7
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 6.6e-12 75.1 187 31.6
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 8.6e-12 74.7 217 32.3
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 8.6e-12 74.7 224 28.6
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.5e-11 73.9 217 31.8
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.9e-11 73.6 182 29.7
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.9e-11 73.6 191 33.0
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 2.5e-11 73.2 196 32.7
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 2.5e-11 73.2 163 35.0
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.3e-11 72.8 190 32.1
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.3e-11 72.8 190 32.1
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 4.3e-11 72.4 160 34.4
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.2e-10 70.9 154 32.5
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 1.6e-10 70.5 104 45.2
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 2.1e-10 70.1 190 32.1
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 2.8e-10 69.7 207 30.4
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.7e-10 68.9 158 34.2
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 6.1e-10 68.6 148 32.4
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 8.0e-10 68.2 154 32.5
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 8.0e-10 68.2 206 30.1
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 8.0e-10 68.2 206 30.1
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 8.0e-10 68.2 206 30.1
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.0e-09 67.8 198 29.3
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.8e-09 67.0 192 32.8
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.8e-09 67.0 210 28.1
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.8e-09 67.0 189 30.2
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.3e-09 66.6 191 31.4
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 2.3e-09 66.6 203 32.5
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.3e-09 66.6 190 32.6
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 3.1e-09 66.2 190 34.2
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 4.0e-09 65.9 106 40.6
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.2e-09 65.5 115 37.4
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 6.8e-09 65.1 108 42.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 8.9e-09 64.7 112 36.6
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.9e-09 64.7 226 27.9
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.2e-08 64.3 205 28.8
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.5e-08 63.9 159 31.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.5e-08 63.9 154 36.4
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.0e-08 63.5 189 31.2
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.6e-08 63.2 169 31.4
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 3.4e-08 62.8 198 29.8
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.7e-07 60.5 93 33.3
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.2e-07 60.1 192 31.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.2e-07 60.1 112 35.7
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 2.9e-07 59.7 229 27.5
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.7e-07 59.3 191 28.8
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 9.2e-06 54.7 211 30.3


User provided reference genes

Program Settings