Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9505 Utricularia gibba HOM05D000239 ORTHO05D000484 6.4e-174 614.0 314 100.0
Migut.O00581 Erythranthe guttata HOM05D000239 ORTHO05D000484 2.5e-40 170.2 279 40.9
SalBow3G0171 Salvia bowleyana HOM05D000239 ORTHO05D000484 3.9e-38 162.9 269 40.1
MSTRG.5090 Avicennia marina HOM05D000239 ORTHO05D000484 3.8e-33 146.4 307 36.5
SGA_v2.0_scaffold196G40957 Striga asiatica HOM05D000239 ORTHO05D000484 5.1e-30 136.0 273 38.5
Thecc.05G290200 Theobroma cacao HOM05D000239 ORTHO05D000484 1.0e-25 121.7 321 34.0
Peaxi162Scf00225g00128 Petunia axillaris HOM05D000239 ORTHO05D000484 1.3e-25 121.3 282 35.1
ECA232G3164 Erigeron canadensis HOM05D000239 ORTHO05D000484 1.1e-24 118.2 242 37.2
Sopen01g041560 Solanum pennellii HOM05D000239 ORTHO05D000484 1.9e-24 117.5 297 33.3
Solyc01g097980.3 Solanum lycopersicum HOM05D000239 ORTHO05D000484 2.5e-24 117.1 297 33.3
Nitab4.5_0002840g0040 Nicotiana tabacum HOM05D000239 ORTHO05D000484 3.2e-24 116.7 300 33.7
Nitab4.5_0002361g0160 Nicotiana tabacum HOM05D000239 ORTHO05D000484 7.2e-24 115.5 313 32.3
COL.COLO4_15253 Corchorus olitorius HOM05D000239 ORTHO05D000484 2.7e-23 113.6 323 33.7
TPR.G2728 Trifolium pratense HOM05D000239 ORTHO05D000484 3.6e-23 113.2 208 37.0
Gohir.A11G256500 Gossypium hirsutum HOM05D000239 ORTHO05D000484 7.9e-23 112.1 282 32.3
Potri.013G034800 Populus trichocarpa HOM05D000239 ORTHO05D000484 1.0e-22 111.7 310 31.3
CAN.G134.179 Capsicum annuum HOM05D000239 ORTHO05D000484 1.4e-22 111.3 280 35.4
Duzib177G0358 Durio zibethinus HOM05D000239 ORTHO05D000484 1.4e-22 111.3 280 34.6
Gorai.007G286200 Gossypium raimondii HOM05D000239 ORTHO05D000484 1.4e-22 111.3 282 33.0
CSS0021894 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.8e-22 110.9 291 33.7
QL03p021956 Quercus lobata HOM05D000239 ORTHO05D000484 2.3e-22 110.5 281 31.7
Manes.08G126700 Manihot esculenta HOM05D000239 ORTHO05D000484 3.9e-22 109.8 319 31.0
Potri.005G047600 Populus trichocarpa HOM05D000239 ORTHO05D000484 3.9e-22 109.8 295 33.9
Gohir.D11G266300 Gossypium hirsutum HOM05D000239 ORTHO05D000484 6.7e-22 109.0 282 31.9
QL03p000278 Quercus lobata HOM05D000239 ORTHO05D000484 1.1e-21 108.2 281 31.7
Hma1.2p1_0332F.1_g127820 Hydrangea macrophylla HOM05D000239 ORTHO05D000484 2.0e-21 107.5 262 33.2
HanXRQChr09g0258711 Helianthus annuus HOM05D000239 ORTHO05D000484 3.3e-21 106.7 264 35.6
Duzib106G1238 Durio zibethinus HOM05D000239 ORTHO05D000484 7.4e-21 105.5 318 31.8
Duzib128G1332 Durio zibethinus HOM05D000239 ORTHO05D000484 9.7e-21 105.1 282 31.9
Sabra05G0043200 Salix brachista HOM05D000239 ORTHO05D000484 1.3e-20 104.8 306 31.7
Medtr1g081790 Medicago truncatula HOM05D000239 ORTHO05D000484 2.2e-20 104.0 251 33.5
PGR083G0953 Punica granatum HOM05D000239 ORTHO05D000484 2.2e-20 104.0 263 34.6
Ca_10067_v3 Cicer arietinum L. HOM05D000239 ORTHO05D000484 2.8e-20 103.6 282 32.3
Glyma.10G159200 Glycine max HOM05D000239 ORTHO05D000484 2.8e-20 103.6 284 33.1
TWI36G0625 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 2.8e-20 103.6 292 32.2
TAR636G3512 Trochodendron aralioides HOM05D000239 ORTHO05D000484 2.8e-20 103.6 310 31.6
Phvul.007G184600 Phaseolus vulgaris HOM05D000239 ORTHO05D000484 1.1e-19 101.7 284 34.2
MD04G1217700 Malus domestica HOM05D000239 ORTHO05D000484 1.4e-19 101.3 282 32.3
Lj5g0007375 Lotus japonicus HOM05D000239 ORTHO05D000484 1.8e-19 100.9 283 31.8
Dinv02600 Davidia involucrata HOM05D000239 ORTHO05D000484 3.1e-19 100.1 293 33.1
arahy.Tifrunner.gnm1.ann1.I5I5B9 Arachis hypogaea HOM05D000239 ORTHO05D000484 4.1e-19 99.8 278 32.7
Dinv17739 Davidia involucrata HOM05D000239 ORTHO05D000484 4.1e-19 99.8 295 32.2
TWI56G1330 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 5.3e-19 99.4 278 31.7
GSVIVG01021884001 Vitis vinifera HOM05D000239 ORTHO05D000484 5.3e-19 99.4 217 35.0
Actinidia33838 Actinidia chinensis HOM05D000239 ORTHO05D000484 6.9e-19 99.0 303 31.0
Lj7C478G12 Lonicera japonica HOM05D000239 ORTHO05D000484 2.6e-18 97.1 289 30.1
Psat6g147920 Pisum sativum HOM05D000239 ORTHO05D000484 2.6e-18 97.1 283 30.7
Sed0002699 Sechium edule HOM05D000239 ORTHO05D000484 3.4e-18 96.7 287 32.8
MD12G1234900 Malus domestica HOM05D000239 ORTHO05D000484 5.9e-18 95.9 294 28.2
Atru.chr2.661 Acer truncatum HOM05D000239 ORTHO05D000484 1.3e-17 94.7 321 29.0
Ciclev10000167m.g Citrus clementina HOM05D000239 ORTHO05D000484 1.3e-17 94.7 319 29.8
Lsat_1_v5_gn_8_116101 Lactuca sativa HOM05D000239 ORTHO05D000484 1.7e-17 94.4 250 33.2
Manes.09G157600 Manihot esculenta HOM05D000239 ORTHO05D000484 3.8e-17 93.2 302 31.1
VMungo0720G2079 Vigna mungo HOM05D000239 ORTHO05D000484 3.8e-17 93.2 287 30.7
Haze_04311 Corylus avellana HOM05D000239 ORTHO05D000484 6.5e-17 92.4 309 30.1
Glyma.20G229500 Glycine max HOM05D000239 ORTHO05D000484 8.5e-17 92.0 283 32.2
DCAR_001929 Daucus carota HOM05D000239 ORTHO05D000484 3.2e-16 90.1 290 28.6
Cpa.g.sc117.42 Carica papaya HOM05D000239 ORTHO05D000484 4.2e-16 89.7 287 29.6
MELO3C015389.2 Cucumis melo HOM05D000239 ORTHO05D000484 5.5e-16 89.4 290 31.0
EL10Ac4g09202 Beta vulgaris HOM05D000239 ORTHO05D000484 7.2e-16 89.0 281 29.5
Ah.04g162450 Amaranthus hybridus HOM05D000239 ORTHO05D000484 2.1e-15 87.4 292 28.1
CDE06G2674 Ceratophyllum demersum HOM05D000239 ORTHO05D000484 2.1e-15 87.4 286 29.7
Lalb_Chr05g0229171 Lupinus albus HOM05D000239 ORTHO05D000484 2.7e-15 87.0 304 29.6
Rhsim05G0150000 Rhododendron simsii HOM05D000239 ORTHO05D000484 2.7e-15 87.0 294 29.9
Aqoxy5G00452 Aquilegia oxysepala HOM05D000239 ORTHO05D000484 3.6e-15 86.7 340 28.2
Cfa006480 Carpinus fangiana HOM05D000239 ORTHO05D000484 3.6e-15 86.7 284 28.5
Lalb_Chr04g0261041 Lupinus albus HOM05D000239 ORTHO05D000484 3.6e-15 86.7 289 29.4
ClCG03G016290 Citrullus lanatus HOM05D000239 ORTHO05D000484 4.7e-15 86.3 282 29.4
Nn6g34082 Nelumbo nucifera HOM05D000239 ORTHO05D000484 6.1e-15 85.9 304 29.3
Sc09g0003720 Simmondsia chinensis HOM05D000239 ORTHO05D000484 6.1e-15 85.9 255 30.2
CDE07G0167 Ceratophyllum demersum HOM05D000239 ORTHO05D000484 7.9e-15 85.5 277 28.5
MBI05_g09173_MAGBIO Magnolia biondii HOM05D000239 ORTHO05D000484 7.9e-15 85.5 267 31.5
Lalb_Chr02g0148581 Lupinus albus HOM05D000239 ORTHO05D000484 1.0e-14 85.1 301 28.2
TAR365G1228 Trochodendron aralioides HOM05D000239 ORTHO05D000484 1.0e-14 85.1 336 28.9
AUR62000958 Chenopodium quinoa HOM05D000239 ORTHO05D000484 1.8e-14 84.3 298 27.2
CiPaw.08G178300 Carya illinoinensis HOM05D000239 ORTHO05D000484 3.9e-14 83.2 266 28.6
Gorai.004G245400 Gossypium raimondii HOM05D000239 ORTHO05D000484 5.2e-14 82.8 320 28.1
CsaV3_1G039660 Cucumis sativus L. HOM05D000239 ORTHO05D000484 6.7e-14 82.4 282 29.8
Thhalv10006727m.g Eutrema salsugineum HOM05D000239 ORTHO05D000484 6.7e-14 82.4 286 31.1
Sp1g07370 Schrenkiella parvula HOM05D000239 ORTHO05D000484 6.7e-14 82.4 278 33.1
AUR62005010 Chenopodium quinoa HOM05D000239 ORTHO05D000484 8.8e-14 82.0 298 27.5
Aa31LG2G18690 Aethionema arabicum HOM05D000239 ORTHO05D000484 1.1e-13 81.6 275 31.6
Gohir.A08G214000 Gossypium hirsutum HOM05D000239 ORTHO05D000484 1.1e-13 81.6 315 30.2
PSO761G0277 Papaver somniferum HOM05D000239 ORTHO05D000484 1.1e-13 81.6 279 28.0
Gohir.D08G231000 Gossypium hirsutum HOM05D000239 ORTHO05D000484 1.5e-13 81.3 320 28.1
AL1G19160 Arabidopsis lyrata HOM05D000239 ORTHO05D000484 2.0e-13 80.9 289 31.8
AT1G08720 Arabidopsis thaliana HOM05D000239 ORTHO05D000484 2.6e-13 80.5 277 30.3
THA.LOC104808243 Tarenaya hassleriana HOM05D000239 ORTHO05D000484 2.6e-13 80.5 296 31.8
Carub.0001s0807 Capsella rubella HOM05D000239 ORTHO05D000484 3.3e-13 80.1 284 30.3
Cc02_g31340 Coffea canephora HOM05D000239 ORTHO05D000484 3.3e-13 80.1 287 28.2
CARHR008640 Cardamine hirsuta HOM05D000239 ORTHO05D000484 4.4e-13 79.7 285 31.6
FvH4_6g03880 Fragaria vesca HOM05D000239 ORTHO05D000484 7.4e-13 79.0 307 28.0
FAN02G2395 Fragaria x ananassa HOM05D000239 ORTHO05D000484 7.4e-13 79.0 309 28.5
FAN09G3294 Fragaria x ananassa HOM05D000239 ORTHO05D000484 7.4e-13 79.0 309 28.2
FAN14G5430 Fragaria x ananassa HOM05D000239 ORTHO05D000484 7.4e-13 79.0 307 28.0
arahy.Tifrunner.gnm1.ann1.UR1HZK Arachis hypogaea HOM05D000239 ORTHO05D000484 9.7e-13 78.6 322 27.3
FAN05G4972 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.3e-12 78.2 307 28.0
RcHm_v2.0_Chr3g0452451 Rosa chinensis HOM05D000239 ORTHO05D000484 1.3e-12 78.2 281 26.7
arahy.Tifrunner.gnm1.ann1.S8VH7K Arachis hypogaea HOM05D000239 ORTHO05D000484 1.7e-12 77.8 334 27.2
CANSAT54G1675 Cannabis sativa HOM05D000239 ORTHO05D000484 1.7e-12 77.8 301 31.2
BcaC07g41929 Brassica carinata HOM05D000239 ORTHO05D000484 2.2e-12 77.4 253 31.2
PSO210G6799 Papaver somniferum HOM05D000239 ORTHO05D000484 2.2e-12 77.4 279 28.0
Hund22095 Selenicereus undatus HOM05D000239 ORTHO05D000484 2.2e-12 77.4 270 28.1
FAN05G4657 Fragaria x ananassa HOM05D000239 ORTHO05D000484 2.8e-12 77.0 307 27.7
vmacro19677 Vaccinium macrocarpon HOM05D000239 ORTHO05D000484 2.8e-12 77.0 298 28.9
CiPaw.07G008300 Carya illinoinensis HOM05D000239 ORTHO05D000484 1.4e-11 74.7 277 27.4
C08p49840 Brassica napus HOM05D000239 ORTHO05D000484 1.8e-11 74.3 266 32.3
BolC8t52513H Brassica oleracea HOM05D000239 ORTHO05D000484 1.8e-11 74.3 266 32.3
Eucgr.B01737 Eucalyptus grandis HOM05D000239 ORTHO05D000484 3.1e-11 73.6 282 27.7
Aqoxy2G03408 Aquilegia oxysepala HOM05D000239 ORTHO05D000484 1.6e-10 71.2 278 27.3
A09p65770 Brassica napus HOM05D000239 ORTHO05D001037 2.6e-10 70.5 266 32.3
BraA09t41921Z Brassica rapa HOM05D000239 ORTHO05D000484 2.6e-10 70.5 266 32.3
Eucgr.L01483 Eucalyptus grandis HOM05D000239 ORTHO05D000484 2.9e-09 67.0 272 28.7
HPP92_023504 Vanilla planifolia HOM05D000239 ORTHO05D000484 3.8e-09 66.6 268 27.2
Os10g0430900 Oryza sativa ssp. japonica HOM05D000239 ORTHO05D000484 6.5e-09 65.9 49 53.1
arahy.Tifrunner.gnm1.ann1.36URGF Arachis hypogaea HOM05D000239 ORTHO05D000484 1.9e-08 64.3 114 37.7
arahy.Tifrunner.gnm1.ann1.V5GBYV Arachis hypogaea HOM05D000239 ORTHO05D000484 3.2e-08 63.5 114 37.7
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 5.5e-08 62.8 68 47.1
Gohir.D12G269000 Gossypium hirsutum HOM05D000239 ORTHO05D000484 7.2e-08 62.4 151 33.1
Gorai.008G289300 Gossypium raimondii HOM05D000239 ORTHO05D000484 7.2e-08 62.4 151 33.1
Manes.06G007900 Manihot esculenta HOM05D000239 ORTHO05D000484 7.2e-08 62.4 161 33.5
SEGI_06306 Sequoiadendron giganteum HOM05D000239 ORTHO05D000484 7.2e-08 62.4 37 75.7
Zm00001eb403280 Zea mays HOM05D000239 ORTHO05D000484 7.2e-08 62.4 285 26.3
SMO266G0109 Selaginella moellendorffii HOM05D000239 ORTHO05D000484 9.4e-08 62.0 49 59.2
TPR.G39789 Trifolium pratense HOM05D000239 ORTHO05D000484 9.4e-08 62.0 105 38.1
Dinv18256 Davidia involucrata HOM05D000239 ORTHO05D000484 1.2e-07 61.6 89 42.7
Manes.14G170100 Manihot esculenta HOM05D000239 ORTHO05D000484 1.2e-07 61.6 108 38.9
Atru.chr9.1751 Acer truncatum HOM05D000239 ORTHO05D000484 1.6e-07 61.2 69 46.4
Lsat_1_v5_gn_2_19441 Lactuca sativa HOM05D000239 ORTHO05D000484 2.1e-07 60.8 144 31.9
Zm00001eb004500 Zea mays HOM05D000239 ORTHO05D000484 2.1e-07 60.8 285 25.6
Duzib084G0861 Durio zibethinus HOM05D000239 ORTHO05D000484 2.7e-07 60.5 136 33.8
Glyma.07G101600 Glycine max HOM05D000239 ORTHO05D000484 2.7e-07 60.5 121 38.0
CSS0005975 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 3.6e-07 60.1 69 47.8
CSS0009740 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 3.6e-07 60.1 69 47.8
DCAR_011327 Daucus carota HOM05D000239 ORTHO05D000484 3.6e-07 60.1 118 38.1
CiPaw.15G140500 Carya illinoinensis HOM05D000239 ORTHO05D000484 4.7e-07 59.7 127 35.4
Gohir.A09G052184 Gossypium hirsutum HOM05D000239 ORTHO05D000484 4.7e-07 59.7 125 36.0
Gohir.D09G052918 Gossypium hirsutum HOM05D000239 ORTHO05D000484 4.7e-07 59.7 125 36.0
Gorai.006G056600 Gossypium raimondii HOM05D000239 ORTHO05D000484 4.7e-07 59.7 125 36.0
DCAR_014731 Daucus carota HOM05D000239 ORTHO05D000484 6.1e-07 59.3 130 33.1
QL10p028295 Quercus lobata HOM05D000239 ORTHO05D000484 6.1e-07 59.3 147 32.7
Cpa.g.sc3.414 Carica papaya HOM05D000239 ORTHO05D000484 8.0e-07 58.9 108 38.0
COL.COLO4_16138 Corchorus olitorius HOM05D000239 ORTHO05D000484 8.0e-07 58.9 108 38.0
MD14G1235100 Malus domestica HOM05D000239 ORTHO05D000484 8.0e-07 58.9 142 33.8
GSVIVG01008413001 Vitis vinifera HOM05D000239 ORTHO05D000484 8.0e-07 58.9 141 31.2
CSS0030644 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.0e-06 58.5 107 37.4
Potri.012G048400 Populus trichocarpa HOM05D000239 ORTHO05D000484 1.0e-06 58.5 69 47.8
AUR62042936 Chenopodium quinoa HOM05D000239 ORTHO05D000484 1.4e-06 58.2 161 30.4
FAN04G2649 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.4e-06 58.2 154 32.5
Potri.015G040100 Populus trichocarpa HOM05D000239 ORTHO05D000484 1.4e-06 58.2 110 37.3
Rhsim12G0139200 Rhododendron simsii HOM05D000239 ORTHO05D000484 1.4e-06 58.2 69 47.8
Atru.chr2.3332 Acer truncatum HOM05D000239 ORTHO05D000484 1.8e-06 57.8 69 44.9
HanXRQChr14g0432751 Helianthus annuus HOM05D000239 ORTHO05D000484 1.8e-06 57.8 92 39.1
QL10p028184 Quercus lobata HOM05D000239 ORTHO05D000484 1.8e-06 57.8 147 32.0
SEGI_11627 Sequoiadendron giganteum HOM05D000239 ORTHO05D000484 2.3e-06 57.4 34 76.5
Actinidia18903 Actinidia chinensis HOM05D000239 ORTHO05D000484 3.0e-06 57.0 69 46.4
arahy.Tifrunner.gnm1.ann1.M8WN25 Arachis hypogaea HOM05D000239 ORTHO05D000484 3.0e-06 57.0 188 30.9
CiPaw.16G092000 Carya illinoinensis HOM05D000239 ORTHO05D000484 3.0e-06 57.0 69 46.4
ECA233G4877 Erigeron canadensis HOM05D000239 ORTHO05D000484 3.0e-06 57.0 176 29.0
Glyma.09G177600 Glycine max HOM05D000239 ORTHO05D000484 3.0e-06 57.0 118 37.3
Sopen03g038030 Solanum pennellii HOM05D000239 ORTHO05D000484 3.0e-06 57.0 111 36.9
Ciclev10007317m.g Citrus clementina HOM05D000239 ORTHO05D000484 4.0e-06 56.6 37 64.9
VMungo0464G0933 Vigna mungo HOM05D000239 ORTHO05D000484 4.0e-06 56.6 118 37.3
Zm00001eb372210 Zea mays HOM05D000239 ORTHO05D000484 4.0e-06 56.6 40 62.5
Actinidia35122 Actinidia chinensis HOM05D000239 ORTHO05D000484 5.2e-06 56.2 89 40.4
DCAR_031740 Daucus carota HOM05D000239 ORTHO05D000484 5.2e-06 56.2 96 36.5
Os02g0743500 Oryza sativa ssp. japonica HOM05D000239 ORTHO05D000484 5.2e-06 56.2 49 53.1
THA.LOC104799167 Tarenaya hassleriana HOM05D000239 ORTHO05D000484 5.2e-06 56.2 49 53.1
FAN27G1411 Fragaria x ananassa HOM05D000239 ORTHO05D000484 6.7e-06 55.8 33 72.7
Lsat_1_v5_gn_8_144000 Lactuca sativa HOM05D000239 ORTHO05D000484 6.7e-06 55.8 60 50.0
Nn4g24191 Nelumbo nucifera HOM05D000239 ORTHO05D000484 6.7e-06 55.8 37 67.6
Nitab4.5_0001986g0060 Nicotiana tabacum HOM05D000239 ORTHO05D000484 6.7e-06 55.8 38 60.5
Os03g0160100 Oryza sativa ssp. japonica HOM05D000239 ORTHO05D000484 6.7e-06 55.8 83 39.8
Sp6g31750 Schrenkiella parvula HOM05D000239 ORTHO05D000484 6.7e-06 55.8 49 53.1
Aa31LG3G15350 Aethionema arabicum HOM05D000239 ORTHO05D000484 8.8e-06 55.5 45 60.0
Ah.11g045240 Amaranthus hybridus HOM05D000239 ORTHO05D000484 8.8e-06 55.5 147 32.7
Duzib068G0966 Durio zibethinus HOM05D000239 ORTHO05D000484 8.8e-06 55.5 120 35.0
Eucgr.B01727 Eucalyptus grandis HOM05D000239 ORTHO05D000484 8.8e-06 55.5 46 52.2
Lj9C421T5 Lonicera japonica HOM05D000239 ORTHO05D000484 8.8e-06 55.5 89 40.4
Lj4g0013397 Lotus japonicus HOM05D000239 ORTHO05D000484 8.8e-06 55.5 64 46.9
PSO210G3578 Papaver somniferum HOM05D000239 ORTHO05D000484 8.8e-06 55.5 35 74.3
PSO210G6305 Papaver somniferum HOM05D000239 ORTHO05D000484 8.8e-06 55.5 35 74.3
Prupe.5G231800 Prunus persica HOM05D000239 ORTHO05D000484 8.8e-06 55.5 147 32.0
TAR624G1150 Trochodendron aralioides HOM05D000239 ORTHO05D000484 8.8e-06 55.5 32 75.0
Zm00001eb392900 Zea mays HOM05D000239 ORTHO05D000484 8.8e-06 55.5 50 54.0


User provided reference genes

Program Settings