Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 3.3e-217 758.1 380 100.0
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 2.8e-147 525.8 378 71.2
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 3.9e-141 505.4 381 66.1
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.9e-140 503.1 375 68.3
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 2.5e-140 502.7 375 68.0
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 5.6e-140 501.5 375 68.3
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 5.6e-140 501.5 375 68.3
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.8e-139 499.2 375 68.0
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 4.8e-139 498.4 375 68.0
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 4.8e-139 498.4 375 68.8
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 1.4e-138 496.9 375 69.3
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.4e-138 496.9 380 67.6
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.8e-138 496.5 376 67.8
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 2.4e-138 496.1 375 68.5
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 3.1e-138 495.7 376 67.6
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 4.0e-138 495.4 375 68.0
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 6.9e-138 494.6 375 68.0
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 3.4e-137 492.3 378 68.0
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 1.3e-136 490.3 375 66.9
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.7e-136 490.0 375 67.7
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.2e-136 489.6 381 64.8
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 2.9e-136 489.2 382 66.0
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 3.8e-136 488.8 374 67.6
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 1.1e-135 487.3 376 67.3
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 2.4e-135 486.1 376 67.3
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 2.4e-135 486.1 375 67.5
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 3.2e-135 485.7 377 66.6
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 3.2e-135 485.7 379 67.5
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 3.2e-135 485.7 375 66.4
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 4.2e-135 485.3 375 66.7
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 1.2e-134 483.8 376 66.0
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 1.6e-134 483.4 381 65.1
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 1.6e-134 483.4 376 66.2
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 2.1e-134 483.0 376 66.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 2.1e-134 483.0 379 67.0
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 2.1e-134 483.0 357 67.5
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 2.7e-134 482.6 349 70.8
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 3.5e-134 482.3 379 67.0
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 3.5e-134 482.3 376 66.2
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 4.6e-134 481.9 375 66.1
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.8e-133 479.9 377 65.8
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 2.3e-133 479.6 375 67.2
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 3.0e-133 479.2 383 65.3
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 3.0e-133 479.2 375 65.9
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 3.9e-133 478.8 356 67.1
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 5.1e-133 478.4 377 64.7
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 5.1e-133 478.4 376 65.7
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 8.7e-133 477.6 387 64.6
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 8.7e-133 477.6 377 64.5
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 1.1e-132 477.2 375 65.3
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 1.1e-132 477.2 375 65.3
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.5e-132 476.9 376 64.6
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 4.3e-132 475.3 375 66.7
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 5.6e-132 474.9 376 64.9
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 7.4e-132 474.6 376 65.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 7.4e-132 474.6 388 64.7
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.3e-131 473.8 373 66.8
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 2.1e-131 473.0 379 64.6
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 3.7e-131 472.2 357 66.1
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 4.8e-131 471.9 375 65.3
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 4.8e-131 471.9 387 63.8
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 4.8e-131 471.9 376 64.9
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 6.2e-131 471.5 375 65.3
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 6.2e-131 471.5 379 63.1
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 6.2e-131 471.5 386 64.2
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 1.4e-130 470.3 375 65.1
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 1.4e-130 470.3 375 64.8
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 1.4e-130 470.3 376 63.8
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.4e-130 470.3 376 64.1
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.8e-130 469.9 383 64.8
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 5.3e-130 468.4 376 64.4
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 6.9e-130 468.0 388 63.4
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 9.0e-130 467.6 375 64.8
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.2e-129 467.2 381 63.0
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-129 466.8 376 64.4
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 2.6e-129 466.1 375 65.1
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.6e-129 466.1 353 67.1
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 3.4e-129 465.7 376 64.4
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 4.5e-129 465.3 385 62.1
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 4.5e-129 465.3 381 64.8
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 5.8e-129 464.9 379 66.0
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 7.6e-129 464.5 394 62.2
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 7.6e-129 464.5 381 64.6
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 9.9e-129 464.2 375 64.5
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 1.3e-128 463.8 381 64.3
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 2.9e-128 462.6 377 64.5
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 2.9e-128 462.6 376 63.3
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 4.9e-128 461.8 381 63.8
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 6.4e-128 461.5 384 62.2
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 8.4e-128 461.1 357 65.3
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.1e-127 460.7 375 64.3
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.4e-127 459.5 332 67.5
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 2.4e-127 459.5 375 64.0
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 4.2e-127 458.8 376 64.1
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 5.5e-127 458.4 375 64.5
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 5.5e-127 458.4 379 63.9
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 1.6e-126 456.8 376 61.4
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.0e-125 454.1 383 62.1
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 1.3e-125 453.8 376 63.3
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.3e-125 453.8 381 60.1
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 3.9e-125 452.2 351 64.7
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.5e-124 449.5 384 62.0
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 3.3e-124 449.1 384 61.7
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.3e-124 448.7 357 63.6
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 7.4e-124 448.0 383 62.1
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 2.1e-123 446.4 382 61.0
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 4.8e-123 445.3 378 61.6
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 4.8e-123 445.3 378 61.6
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 6.2e-123 444.9 381 60.4
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.5e-121 440.3 410 58.5
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 5.8e-121 438.3 381 59.8
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 2.9e-120 436.0 375 59.2
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 3.8e-120 435.6 385 58.4
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 3.2e-119 432.6 382 59.2
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 7.1e-119 431.4 384 59.1
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 7.9e-118 427.9 384 59.1
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 5.1e-117 425.2 382 57.1
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 6.7e-117 424.9 378 62.2
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 5.7e-116 421.8 331 65.6
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.3e-115 420.6 374 61.0
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 1.6e-115 420.2 389 58.4
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 8.5e-112 407.9 272 72.8
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.1e-111 407.5 377 59.4
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.5e-111 405.2 376 57.4
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 6.1e-110 401.7 376 56.9
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.8e-109 400.2 268 71.3
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 1.8e-106 390.2 382 54.5
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.5e-105 387.1 313 62.0
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 4.5e-105 385.6 386 55.4
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.1e-102 376.7 385 53.5
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 8.2e-99 364.8 387 53.0
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 2.2e-96 356.7 345 57.1
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 4.4e-92 342.4 383 48.0
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 3.7e-91 339.3 391 48.1
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 6.3e-91 338.6 380 50.8
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 8.0e-86 321.6 398 45.5
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 6.8e-77 292.0 362 46.1
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 2.0e-76 290.4 351 44.4
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 9.5e-71 271.6 380 41.3
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 5.2e-69 265.8 326 44.8
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 2.9e-64 250.0 363 39.9
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 8.9e-61 238.4 294 49.3
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 1.3e-59 234.6 244 52.5
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 1.9e-55 220.7 166 68.7
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.9e-51 206.8 216 53.7
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 6.4e-43 179.1 281 38.1
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 7.1e-42 175.6 92 88.0
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 3.3e-39 166.8 111 75.7
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.6e-38 164.5 171 46.2
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 4.7e-38 162.9 330 32.1
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.1e-37 161.8 268 34.0
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 3.8e-27 126.7 308 29.2
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 3.5e-25 120.2 258 31.0
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 1.6e-22 111.3 139 45.3
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.2e-19 100.9 108 58.3
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 7.1e-18 95.9 73 67.1
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 6.0e-17 92.8 119 51.3
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 1.4e-13 81.6 159 34.0
Haze_27091 Corylus avellana HOM05D002999 ORTHO05D003137 2.3e-08 64.3 160 27.5
Eucgr.B01222 Eucalyptus grandis HOM05D002999 ORTHO05D003137 1.1e-07 62.0 248 23.4
FvH4_4g16870 Fragaria vesca HOM05D002999 ORTHO05D003137 1.5e-07 61.6 151 27.8
AUR62018095 Chenopodium quinoa HOM05D002999 ORTHO05D003137 9.6e-07 58.9 198 24.2
CBR_g51007 Chara braunii HOM05D004669 ORTHO05D005767 1.3e-06 58.5 205 19.5
Sed0010016 Sechium edule HOM05D004669 ORTHO05D005767 1.3e-06 58.5 201 23.4
Cc01_g19980 Coffea canephora HOM05D002999 ORTHO05D003137 1.6e-06 58.2 205 24.9
MBI19_g13509_MAGBIO Magnolia biondii HOM05D002999 ORTHO05D003137 2.1e-06 57.8 149 26.2
MSTRG.22725 Avicennia marina HOM05D004669 ORTHO05D005767 3.7e-06 57.0 200 24.5
CDE11G1221 Ceratophyllum demersum HOM05D002999 ORTHO05D003137 3.7e-06 57.0 145 26.2
Sed0001284 Sechium edule HOM05D004669 ORTHO05D005767 4.8e-06 56.6 197 22.8


User provided reference genes

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