Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9475 Utricularia gibba HOM05D003270 ORTHO05D003662 5.0e-76 287.7 148 100.0
MSTRG.27960 Avicennia marina HOM05D003270 ORTHO05D003662 3.0e-33 145.6 130 58.5
MSTRG.20399 Avicennia marina HOM05D003270 ORTHO05D003662 5.8e-32 141.4 122 62.3
Dinv24423 Davidia involucrata HOM05D003270 ORTHO05D003662 4.6e-29 131.7 121 57.9
Oeu064808.1 Olea europaea HOM05D003270 ORTHO05D003662 1.7e-28 129.8 126 59.5
Oeu053700.1 Olea europaea HOM05D003270 ORTHO05D003662 6.6e-28 127.9 126 60.3
Prupe.6G315100 Prunus persica HOM05D003270 ORTHO05D003662 1.1e-27 127.1 122 54.9
COL.COLO4_23261 Corchorus olitorius HOM05D003270 ORTHO05D003662 3.3e-27 125.6 123 55.3
Thecc.01G310400 Theobroma cacao HOM05D003270 ORTHO05D003662 4.3e-27 125.2 122 55.7
Medtr1g083860 Medicago truncatula HOM05D003270 ORTHO05D003662 5.6e-27 124.8 133 54.1
Psat0ss9276g0040 Pisum sativum HOM05D003270 ORTHO05D003662 5.6e-27 124.8 128 53.9
Cpa.g.sc18.7 Carica papaya HOM05D003270 ORTHO05D003662 1.2e-26 123.6 117 59.8
Migut.B00996 Erythranthe guttata HOM05D003270 ORTHO05D003662 2.1e-26 122.9 126 54.0
Cc02_g34800 Coffea canephora HOM05D003270 ORTHO05D003662 2.8e-26 122.5 125 57.6
Duzib133G0997 Durio zibethinus HOM05D003270 ORTHO05D003662 2.8e-26 122.5 123 52.8
Ca_10162_v3 Cicer arietinum L. HOM05D003270 ORTHO05D003662 3.6e-26 122.1 118 55.9
Nitab4.5_0000368g0280 Nicotiana tabacum HOM05D003270 ORTHO05D003662 3.6e-26 122.1 132 53.8
Phvul.007G200400 Phaseolus vulgaris HOM05D003270 ORTHO05D003662 3.6e-26 122.1 124 53.2
PGSC0003DMG400045409 Solanum tuberosum HOM05D003270 ORTHO05D003662 3.6e-26 122.1 131 55.7
Glyma.10G148100 Glycine max HOM05D003270 ORTHO05D003662 6.2e-26 121.3 124 55.6
Gorai.007G124400 Gossypium raimondii HOM05D003270 ORTHO05D003662 6.2e-26 121.3 129 55.0
Solyc01g100310.2 Solanum lycopersicum HOM05D003270 ORTHO05D003662 6.2e-26 121.3 132 54.5
ClCG02G015100 Citrullus lanatus HOM05D003270 ORTHO05D003662 8.0e-26 120.9 115 55.7
Nitab4.5_0009033g0010 Nicotiana tabacum HOM05D003270 ORTHO05D003662 8.0e-26 120.9 132 54.5
Sopen01g043820 Solanum pennellii HOM05D003270 ORTHO05D003662 8.0e-26 120.9 132 54.5
VMungo0720G0293 Vigna mungo HOM05D003270 ORTHO05D003662 1.1e-25 120.6 124 54.0
Atru.chr5.1050 Acer truncatum HOM05D003270 ORTHO05D003662 1.4e-25 120.2 119 52.1
Hma1.2p1_0472F.1_g159920 Hydrangea macrophylla HOM05D003270 ORTHO05D003662 1.4e-25 120.2 123 55.3
TAR362G0787 Trochodendron aralioides HOM05D003270 ORTHO05D003662 1.4e-25 120.2 126 54.0
Duzib138G1932 Durio zibethinus HOM05D003270 ORTHO05D003662 1.8e-25 119.8 134 51.5
Glyma.20G239500 Glycine max HOM05D003270 ORTHO05D003662 1.8e-25 119.8 116 56.9
Sed0024328 Sechium edule HOM05D003270 ORTHO05D003662 1.8e-25 119.8 117 58.1
TAR633G1026 Trochodendron aralioides HOM05D003270 ORTHO05D003662 1.8e-25 119.8 132 56.1
QL03p018283 Quercus lobata HOM05D003270 ORTHO05D003662 2.3e-25 119.4 127 52.8
Glyma.19G229100 Glycine max HOM05D003270 ORTHO05D003662 3.1e-25 119.0 133 53.4
Potri.005G019600 Populus trichocarpa HOM05D003270 ORTHO05D003662 3.1e-25 119.0 123 52.8
Phvul.001G225700 Phaseolus vulgaris HOM05D003270 ORTHO05D003662 4.0e-25 118.6 117 55.6
Sabra05G0013100 Salix brachista HOM05D003270 ORTHO05D003662 4.0e-25 118.6 123 52.8
Sabra05G0025900 Salix brachista HOM05D003270 ORTHO05D003662 4.0e-25 118.6 123 52.8
Gohir.D11G116200 Gossypium hirsutum HOM05D003270 ORTHO05D003662 5.2e-25 118.2 122 54.1
VMungo1383G3394 Vigna mungo HOM05D003270 ORTHO05D003662 6.8e-25 117.9 117 56.4
Ciclev10020563m.g Citrus clementina HOM05D003270 ORTHO05D003662 8.9e-25 117.5 116 53.4
Gohir.A11G111000 Gossypium hirsutum HOM05D003270 ORTHO05D003662 8.9e-25 117.5 127 54.3
MD04G1195400 Malus domestica HOM05D003270 ORTHO05D003662 8.9e-25 117.5 132 50.0
Peaxi162Scf00673g00111 Petunia axillaris HOM05D003270 ORTHO05D003662 8.9e-25 117.5 121 57.0
CANSAT54G2803 Cannabis sativa HOM05D003270 ORTHO05D003662 1.2e-24 117.1 126 50.8
Rhsim11G0093900 Rhododendron simsii HOM05D003270 ORTHO05D003662 1.5e-24 116.7 136 52.2
Manes.09G175500 Manihot esculenta HOM05D003270 ORTHO05D003662 2.0e-24 116.3 131 51.9
TWI75G0329 Tripterygium wilfordii HOM05D003270 ORTHO05D003662 3.4e-24 115.5 120 52.5
vmacro01553 Vaccinium macrocarpon HOM05D003270 ORTHO05D003662 3.4e-24 115.5 124 54.0
Dinv10073 Davidia involucrata HOM05D003270 ORTHO05D003662 4.4e-24 115.2 122 53.3
Duzib106G1200 Durio zibethinus HOM05D003270 ORTHO05D003662 4.4e-24 115.2 127 52.0
CiPaw.07G027900 Carya illinoinensis HOM05D003270 ORTHO05D003662 5.8e-24 114.8 140 50.0
Duzib211G0334 Durio zibethinus HOM05D003270 ORTHO05D003662 5.8e-24 114.8 122 54.1
BraA09t40862Z Brassica rapa HOM05D003270 ORTHO05D003662 7.5e-24 114.4 123 49.6
COL.COLO4_04139 Corchorus olitorius HOM05D003270 ORTHO05D003662 7.5e-24 114.4 127 51.2
Gohir.A11G272200 Gossypium hirsutum HOM05D003270 ORTHO05D003662 7.5e-24 114.4 135 51.9
Lj1C19T9 Lonicera japonica HOM05D003270 ORTHO05D003662 7.5e-24 114.4 128 50.8
Sabra13G0009000 Salix brachista HOM05D003270 ORTHO05D003662 7.5e-24 114.4 121 53.7
Gorai.007G305200 Gossypium raimondii HOM05D003270 ORTHO05D003662 9.8e-24 114.0 127 52.8
Potri.013G010400 Populus trichocarpa HOM05D003270 ORTHO05D003662 9.8e-24 114.0 121 52.1
TWI18G0328 Tripterygium wilfordii HOM05D003270 ORTHO05D003662 9.8e-24 114.0 134 49.3
Duzib177G0761 Durio zibethinus HOM05D003270 ORTHO05D003662 1.3e-23 113.6 125 53.6
A09p54490 Brassica napus HOM05D003270 ORTHO05D003662 1.7e-23 113.2 123 48.8
Gohir.D11G282400 Gossypium hirsutum HOM05D003270 ORTHO05D003662 1.7e-23 113.2 127 52.8
RcHm_v2.0_Chr3g0456851 Rosa chinensis HOM05D003270 ORTHO05D003662 2.2e-23 112.8 121 52.9
THA.LOC104802192 Tarenaya hassleriana HOM05D003270 ORTHO05D003662 2.2e-23 112.8 119 52.9
Haze_05011 Corylus avellana HOM05D003270 ORTHO05D003662 2.9e-23 112.5 122 53.3
Thecc.05G320900 Theobroma cacao HOM05D003270 ORTHO05D003662 2.9e-23 112.5 124 52.4
Cfa005832 Carpinus fangiana HOM05D003270 ORTHO05D003662 3.7e-23 112.1 134 52.2
MBI18_g09595_MAGBIO Magnolia biondii HOM05D003270 ORTHO05D003662 3.7e-23 112.1 118 55.1
Manes.08G112500 Manihot esculenta HOM05D003270 ORTHO05D003662 3.7e-23 112.1 130 50.8
Cpa.g.sc48.143 Carica papaya HOM05D003270 ORTHO05D003662 6.4e-23 111.3 119 51.3
Duzib128G0340 Durio zibethinus HOM05D003270 ORTHO05D003662 6.4e-23 111.3 125 53.6
BcaC07g40778 Brassica carinata HOM05D003270 ORTHO05D003662 8.3e-23 110.9 117 51.3
Dinv33100 Davidia involucrata HOM05D003270 ORTHO05D003662 8.3e-23 110.9 123 52.8
Eucgr.B01665 Eucalyptus grandis HOM05D003270 ORTHO05D003662 1.1e-22 110.5 122 50.0
SGA_v2.0_scaffold334G49055 Striga asiatica HOM05D003270 ORTHO05D003662 1.1e-22 110.5 125 53.6
THA.LOC104817469 Tarenaya hassleriana HOM05D003270 ORTHO05D003662 1.1e-22 110.5 133 48.9
Oeu064465.1 Olea europaea HOM05D003270 ORTHO05D003662 1.4e-22 110.2 128 53.1
DCAR_012363 Daucus carota HOM05D003270 ORTHO05D003662 1.9e-22 109.8 128 51.6
Thhalv10006025m.g Eutrema salsugineum HOM05D003270 ORTHO05D003662 1.9e-22 109.8 120 50.0
Cfa006685 Carpinus fangiana HOM05D003270 ORTHO05D003662 2.4e-22 109.4 115 57.4
Haze_04081 Corylus avellana HOM05D003270 ORTHO05D003662 2.4e-22 109.4 115 57.4
Gohir.A08G206700 Gossypium hirsutum HOM05D003270 ORTHO05D003662 2.4e-22 109.4 123 52.0
Gorai.004G237300 Gossypium raimondii HOM05D003270 ORTHO05D003662 2.4e-22 109.4 123 52.0
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.1e-22 108.6 129 48.8
BcaC08g45206 Brassica carinata HOM05D003270 ORTHO05D003662 4.1e-22 108.6 122 52.5
TWI12G1061 Tripterygium wilfordii HOM05D003270 ORTHO05D003662 4.1e-22 108.6 129 49.6
BcaB02g07333 Brassica carinata HOM05D003270 ORTHO05D003662 5.4e-22 108.2 130 46.9
FvH4_6g07220 Fragaria vesca HOM05D003270 ORTHO05D003662 5.4e-22 108.2 118 53.4
FAN02G1275 Fragaria x ananassa HOM05D003270 ORTHO05D003662 5.4e-22 108.2 118 53.4
FAN09G4575 Fragaria x ananassa HOM05D003270 ORTHO05D003662 5.4e-22 108.2 118 53.4
FAN14G5384 Fragaria x ananassa HOM05D003270 ORTHO05D003662 5.4e-22 108.2 118 53.4
Lsat_1_v5_gn_5_102781 Lactuca sativa HOM05D003270 ORTHO05D003662 5.4e-22 108.2 121 52.9
HPP92_006895 Vanilla planifolia HOM05D003270 ORTHO05D003662 5.4e-22 108.2 134 50.0
AT3G62630 Arabidopsis thaliana HOM05D003270 ORTHO05D003662 7.0e-22 107.8 114 52.6
FAN05G0778 Fragaria x ananassa HOM05D003270 ORTHO05D003662 7.0e-22 107.8 118 53.4
Gohir.D08G223400 Gossypium hirsutum HOM05D003270 ORTHO05D003662 7.0e-22 107.8 123 51.2
Oeu008454.1 Olea europaea HOM05D003270 ORTHO05D003662 7.0e-22 107.8 122 49.2
Ciclev10001511m.g Citrus clementina HOM05D003270 ORTHO05D003662 9.2e-22 107.5 118 54.2
Sp5g00880 Schrenkiella parvula HOM05D003270 ORTHO05D003662 9.2e-22 107.5 117 50.4
Actinidia21011 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.2e-21 107.1 118 54.2
SHI19885 Sapria himalayana HOM05D003270 ORTHO05D003662 1.6e-21 106.7 118 52.5
BcaC07g40737 Brassica carinata HOM05D003270 ORTHO05D003662 2.1e-21 106.3 135 45.9
BolC8t51316H Brassica oleracea HOM05D003270 ORTHO05D003662 2.1e-21 106.3 135 45.9
CsaV3_2G006930 Cucumis sativus L. HOM05D003270 ORTHO05D003662 2.1e-21 106.3 117 53.0
C08p37380 Brassica napus HOM05D003270 ORTHO05D003662 2.7e-21 105.9 135 45.9
BolC6t38001H Brassica oleracea HOM05D003270 ORTHO05D003662 2.7e-21 105.9 114 51.8
CiPaw.08G091500 Carya illinoinensis HOM05D003270 ORTHO05D003662 2.7e-21 105.9 127 50.4
HanXRQChr03g0073781 Helianthus annuus HOM05D003270 ORTHO05D003662 3.5e-21 105.5 123 52.8
Lj1g0001768 Lotus japonicus HOM05D003270 ORTHO05D003662 4.6e-21 105.1 128 50.8
Aa31LG10G16440 Aethionema arabicum HOM05D003270 ORTHO05D003662 6.0e-21 104.8 134 48.5
Aa31LG1G28780 Aethionema arabicum HOM05D003270 ORTHO05D003662 6.0e-21 104.8 126 50.8
AL5G45380 Arabidopsis lyrata HOM05D003270 ORTHO05D003662 7.8e-21 104.4 114 51.8
MSTRG.21671 Avicennia marina HOM05D003270 ORTHO05D003662 7.8e-21 104.4 120 53.3
C06p28310 Brassica napus HOM05D003270 ORTHO05D003662 1.0e-20 104.0 142 45.8
CiPaw.08G156700 Carya illinoinensis HOM05D003270 ORTHO05D003662 1.0e-20 104.0 117 54.7
Gohir.A13G111800 Gossypium hirsutum HOM05D003270 ORTHO05D003662 1.0e-20 104.0 127 50.4
Gohir.D13G181200 Gossypium hirsutum HOM05D003270 ORTHO05D003662 1.0e-20 104.0 121 50.4
Gorai.013G128900 Gossypium raimondii HOM05D003270 ORTHO05D003662 1.0e-20 104.0 127 50.4
Gorai.013G206700 Gossypium raimondii HOM05D003270 ORTHO05D003662 1.0e-20 104.0 121 50.4
MD12G1207500 Malus domestica HOM05D003270 ORTHO05D003662 1.0e-20 104.0 118 50.0
EL10Ac4g09832 Beta vulgaris HOM05D003270 ORTHO05D003662 1.3e-20 103.6 118 50.8
Atru.chr2.147 Acer truncatum HOM05D003270 ORTHO05D003662 5.1e-20 101.7 120 52.5
ClCG03G017710 Citrullus lanatus HOM05D003270 ORTHO05D003662 5.1e-20 101.7 114 53.5
Gohir.A13G175300 Gossypium hirsutum HOM05D003270 ORTHO05D003662 5.1e-20 101.7 121 48.8
CDE05G1863 Ceratophyllum demersum HOM05D003270 ORTHO05D003662 6.6e-20 101.3 119 48.7
AUR62005271 Chenopodium quinoa HOM05D003270 ORTHO05D003662 6.6e-20 101.3 124 50.0
Migut.D00099 Erythranthe guttata HOM05D003270 ORTHO05D003662 6.6e-20 101.3 119 49.6
Gohir.D13G114700 Gossypium hirsutum HOM05D003270 ORTHO05D003662 6.6e-20 101.3 127 49.6
TAR365G1126 Trochodendron aralioides HOM05D003270 ORTHO05D003662 6.6e-20 101.3 121 49.6
Lju1295C4T4 Lonicera japonica HOM05D003270 ORTHO05D003662 8.6e-20 100.9 117 50.4
CsaV3_1G038290 Cucumis sativus L. HOM05D003270 ORTHO05D003662 1.5e-19 100.1 114 53.5
BraA07t30249Z Brassica rapa HOM05D003270 ORTHO05D003662 4.3e-19 98.6 122 50.0
SalBow2G3578 Salvia bowleyana HOM05D003270 ORTHO05D003662 4.3e-19 98.6 113 53.1
MELO3C015259.2 Cucumis melo HOM05D003270 ORTHO05D003662 5.6e-19 98.2 114 52.6
Sed0010633 Sechium edule HOM05D003270 ORTHO05D003662 5.6e-19 98.2 114 50.0
Aqoxy2G02803 Aquilegia oxysepala HOM05D003270 ORTHO05D003662 7.3e-19 97.8 137 45.3
Aqoxy6G02451 Aquilegia oxysepala HOM05D003270 ORTHO05D003662 7.3e-19 97.8 137 45.3
CDE11G0260 Ceratophyllum demersum HOM05D003270 ORTHO05D003662 9.5e-19 97.4 119 47.9
MELO3C004199.2 Cucumis melo HOM05D003270 ORTHO05D003662 1.6e-18 96.7 113 50.4
PGR083G0838 Punica granatum HOM05D003270 ORTHO05D003662 1.1e-17 94.0 144 47.9
Lalb_Chr02g0147891 Lupinus albus HOM05D003270 ORTHO05D003662 1.8e-17 93.2 119 47.9
THA.LOC104825946 Tarenaya hassleriana HOM05D003270 ORTHO05D003662 1.8e-17 93.2 139 45.3
TPR.G2604 Trifolium pratense HOM05D000001 ORTHO05D004269 6.8e-17 91.3 105 51.4
Lalb_Chr06g0167501 Lupinus albus HOM05D003270 ORTHO05D003662 1.5e-16 90.1 117 45.3
Lsat_1_v5_gn_9_122521 Lactuca sativa HOM05D003270 ORTHO05D003662 3.4e-16 89.0 121 43.8
SEGI_37418 Sequoiadendron giganteum HOM05D003270 ORTHO05D003662 7.5e-16 87.8 132 43.9
Sc16g0008920 Simmondsia chinensis HOM05D003270 ORTHO05D003662 9.9e-16 87.4 117 47.0
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 2.9e-15 85.9 111 48.6
SalBow6G5933 Salvia bowleyana HOM05D003270 ORTHO05D003662 1.1e-14 84.0 136 43.4
A07p26010 Brassica napus HOM05D003270 ORTHO05D003662 2.4e-14 82.8 122 45.1
Glyma.03G232100 Glycine max HOM05D003270 ORTHO05D003662 3.2e-14 82.4 120 45.0
unitig_85.g27177 Utricularia gibba HOM05D003270 ORTHO05D003662 5.4e-14 81.6 132 41.7
TPR.G29277 Trifolium pratense HOM05D003270 ORTHO05D003662 3.5e-13 79.0 83 49.4
Zm00001eb028330 Zea mays HOM05D003270 ORTHO05D003662 6.0e-13 78.2 128 43.8
PSO210G1568 Papaver somniferum HOM05D003270 ORTHO05D003662 1.7e-12 76.6 120 40.0
Carub.0005s2929 Capsella rubella HOM05D003270 ORTHO05D003662 3.0e-12 75.9 115 42.6
PSO761G0218 Papaver somniferum HOM05D003270 ORTHO05D003662 3.9e-12 75.5 119 41.2
Os11g0672900 Oryza sativa ssp. japonica HOM05D003270 ORTHO05D003662 6.6e-12 74.7 123 43.9
Os03g0303100 Oryza sativa ssp. japonica HOM05D003270 ORTHO05D003662 8.6e-12 74.3 101 45.5
MBI19_g22895_MAGBIO Magnolia biondii HOM05D003270 ORTHO05D003662 1.1e-11 73.9 89 47.2
Sc09g0002690 Simmondsia chinensis HOM05D003270 ORTHO05D003662 1.1e-11 73.9 139 38.8
CARHR172900 Cardamine hirsuta HOM05D003270 ORTHO05D003662 1.9e-11 73.2 116 43.1
Hma1.2p1_0008F-1.1_g005770 Hydrangea macrophylla HOM05D003270 ORTHO05D003662 1.9e-11 73.2 133 41.4
ATR0706G204 Amborella trichopoda HOM05D003270 ORTHO05D003662 7.3e-11 71.2 110 47.3
SalBow8G3220 Salvia bowleyana HOM05D003270 ORTHO05D003662 7.3e-11 71.2 93 48.4
GSVIVG01028087001 Vitis vinifera HOM05D003270 ORTHO05D003662 1.6e-10 70.1 57 61.4
Zm00001eb396400 Zea mays HOM05D003270 ORTHO05D003662 3.6e-10 68.9 102 47.1
HanXRQChr10g0299241 Helianthus annuus HOM05D003270 ORTHO05D003662 4.7e-10 68.6 115 43.5
Lj5P337T13 Lonicera japonica HOM05D003270 ORTHO05D003662 6.2e-10 68.2 84 47.6
SEGI_11594 Sequoiadendron giganteum HOM05D003270 ORTHO05D003662 8.1e-10 67.8 142 38.0
Zm00001eb014250 Zea mays HOM05D003270 ORTHO05D003662 1.8e-09 66.6 134 41.8
Dinv30870 Davidia involucrata HOM05D003270 ORTHO05D003662 6.8e-09 64.7 134 36.6
Lj5g0008189 Lotus japonicus HOM05D003270 ORTHO05D003662 8.9e-09 64.3 110 40.9
CAN.G1273.2 Capsicum annuum HOM05D003270 ORTHO05D003662 2.0e-08 63.2 41 70.7
ECA234G3267 Erigeron canadensis HOM05D003270 ORTHO05D003662 2.9e-07 59.3 120 38.3
Lalb_Chr04g0260481 Lupinus albus HOM05D003270 ORTHO05D003662 3.8e-07 58.9 95 41.1
Os12g0556900 Oryza sativa ssp. japonica HOM05D003270 ORTHO05D003662 1.1e-06 57.4 95 41.1
THA.LOC104827699 Tarenaya hassleriana HOM05D003270 ORTHO05D003662 1.4e-06 57.0 71 46.5
VMungo1215G0333 Vigna mungo HOM05D001841 ORTHO05D001767 1.4e-06 57.0 124 38.7
Atru.chr5.2772 Acer truncatum HOM05D001841 ORTHO05D001767 2.4e-06 56.2 101 38.6
Oeu057825.1 Olea europaea HOM05D000201 ORTHO05D001515 3.2e-06 55.8 85 38.8
Cpa.g.sc62.35 Carica papaya HOM05D001841 ORTHO05D001767 7.1e-06 54.7 123 35.0


User provided reference genes

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