Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9418 Utricularia gibba HOM05D001105 ORTHO05D003643 2.6e-61 238.4 113 100.0
unitig_749.g13604 Utricularia gibba HOM05D001105 ORTHO05D003643 2.9e-28 128.6 117 60.7
Rhsim01G0200900 Rhododendron simsii HOM05D001105 ORTHO05D003643 1.3e-15 86.7 112 46.4
Thecc.09G271400 Theobroma cacao HOM05D001105 ORTHO05D003643 1.7e-15 86.3 119 46.2
Migut.O00651 Erythranthe guttata HOM05D001105 ORTHO05D003643 2.2e-15 85.9 109 47.7
Gohir.D07G117200 Gossypium hirsutum HOM05D001105 ORTHO05D003643 4.9e-15 84.7 102 44.1
MD11G1173900 Malus domestica HOM05D001105 ORTHO05D003643 6.4e-15 84.3 114 41.2
Dinv33540 Davidia involucrata HOM05D001105 ORTHO05D003643 8.3e-15 84.0 106 45.3
Glyma.12G095200 Glycine max HOM05D001105 ORTHO05D003643 1.4e-14 83.2 113 40.7
Gorai.001G126000 Gossypium raimondii HOM05D001105 ORTHO05D003643 1.4e-14 83.2 102 46.1
Gohir.A07G113500 Gossypium hirsutum HOM05D001105 ORTHO05D003643 1.9e-14 82.8 102 43.1
Lsat_1_v5_gn_2_35160 Lactuca sativa HOM05D001105 ORTHO05D003643 2.4e-14 82.4 103 43.7
Prupe.6G145500 Prunus persica HOM05D001105 ORTHO05D003643 5.4e-14 81.3 116 40.5
Duzib168G1448 Durio zibethinus HOM05D001105 ORTHO05D003643 7.0e-14 80.9 121 39.7
RcHm_v2.0_Chr5g0048601 Rosa chinensis HOM05D001105 ORTHO05D003643 9.2e-14 80.5 110 40.9
TWI79G1166 Tripterygium wilfordii HOM05D001105 ORTHO05D003643 9.2e-14 80.5 115 45.2
Potri.001G216000 Populus trichocarpa HOM05D001105 ORTHO05D003643 1.6e-13 79.7 126 39.7
FAN25G0372 Fragaria x ananassa HOM05D001105 ORTHO05D003643 2.0e-13 79.3 111 42.3
Atru.chr3.3102 Acer truncatum HOM05D001105 ORTHO05D003643 3.5e-13 78.6 123 39.8
Peaxi162Scf00098g00112 Petunia axillaris HOM05D001105 ORTHO05D003643 3.5e-13 78.6 125 40.8
FvH4_3g26310 Fragaria vesca HOM05D001105 ORTHO05D003643 4.6e-13 78.2 111 41.4
FAN16G3495 Fragaria x ananassa HOM05D001105 ORTHO05D003643 4.6e-13 78.2 111 41.4
Glyma.11G177001 Glycine max HOM05D001105 ORTHO05D003643 6.0e-13 77.8 128 34.4
Nitab4.5_0000875g0110 Nicotiana tabacum HOM05D001105 ORTHO05D003643 1.0e-12 77.0 123 39.0
CAN.G1463.14 Capsicum annuum HOM05D001105 ORTHO05D003643 1.3e-12 76.6 116 39.7
Oeu058193.2 Olea europaea HOM05D001105 ORTHO05D003643 1.3e-12 76.6 108 39.8
Nn2g14335 Nelumbo nucifera HOM05D001105 ORTHO05D003643 1.7e-12 76.3 116 40.5
Potri.009G016600 Populus trichocarpa HOM05D001105 ORTHO05D003643 3.0e-12 75.5 125 37.6
Aqoxy1G00642 Aquilegia oxysepala HOM05D001105 ORTHO05D003643 3.9e-12 75.1 121 39.7
CiPaw.13G128900 Carya illinoinensis HOM05D001105 ORTHO05D003643 3.9e-12 75.1 115 40.0
Duzib150G1443 Durio zibethinus HOM05D001105 ORTHO05D003643 3.9e-12 75.1 120 39.2
Actinidia35484 Actinidia chinensis HOM05D001105 ORTHO05D003643 6.6e-12 74.3 113 38.9
FAN21G1882 Fragaria x ananassa HOM05D001105 ORTHO05D003643 1.5e-11 73.2 111 39.6
Lj3g0020217 Lotus japonicus HOM05D001105 ORTHO05D003643 1.9e-11 72.8 122 36.9
Oeu026358.1 Olea europaea HOM05D001105 ORTHO05D003643 1.9e-11 72.8 102 43.1
CiPaw.14G094000 Carya illinoinensis HOM05D001105 ORTHO05D003643 3.3e-11 72.0 117 36.8
Sabra16G0127700 Salix brachista HOM05D001105 ORTHO05D003643 3.3e-11 72.0 121 38.0
VMungo1127G0292 Vigna mungo HOM05D001105 ORTHO05D003643 3.3e-11 72.0 134 34.3
Gohir.A09G100100 Gossypium hirsutum HOM05D001105 ORTHO05D003643 4.3e-11 71.6 119 37.0
Gorai.006G116500 Gossypium raimondii HOM05D001105 ORTHO05D003643 7.3e-11 70.9 119 37.0
MD03G1156200 Malus domestica HOM05D001105 ORTHO05D003643 7.3e-11 70.9 118 40.7
CSS0019741 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D003643 1.2e-10 70.1 112 38.4
COL.COLO4_25412 Corchorus olitorius HOM05D001105 ORTHO05D003643 1.2e-10 70.1 115 40.0
Actinidia07280 Actinidia chinensis HOM05D001105 ORTHO05D003643 1.6e-10 69.7 104 43.3
Duzib170G0012 Durio zibethinus HOM05D001105 ORTHO05D003643 1.6e-10 69.7 95 38.9
Eucgr.J00576 Eucalyptus grandis HOM05D001105 ORTHO05D003643 2.1e-10 69.3 125 36.0
Gohir.D09G099500 Gossypium hirsutum HOM05D001105 ORTHO05D003643 2.1e-10 69.3 119 37.0
Medtr4g050590 Medicago truncatula HOM05D001105 ORTHO05D003643 2.1e-10 69.3 128 34.4
PGR044G1104 Punica granatum HOM05D001105 ORTHO05D003643 2.8e-10 68.9 107 40.2
Phvul.011G099500 Phaseolus vulgaris HOM05D001105 ORTHO05D003643 3.6e-10 68.6 127 37.0
CANSAT54G2833 Cannabis sativa HOM05D001105 ORTHO05D003643 1.1e-09 67.0 114 39.5
MELO3C014521.2 Cucumis melo HOM05D001105 ORTHO05D003643 1.1e-09 67.0 124 38.7
PGSC0003DMG400005904 Solanum tuberosum HOM05D001105 ORTHO05D003643 1.1e-09 67.0 96 38.5
TPR.G4653 Trifolium pratense HOM05D001105 ORTHO05D003643 1.1e-09 67.0 126 30.2
Nitab4.5_0003657g0020 Nicotiana tabacum HOM05D001105 ORTHO05D003643 1.4e-09 66.6 122 37.7
MSTRG.18796 Avicennia marina HOM05D001105 ORTHO05D003643 1.8e-09 66.2 109 42.2
Ca_19474_v3 Cicer arietinum L. HOM05D001105 ORTHO05D003643 1.8e-09 66.2 130 34.6
QL01p019511 Quercus lobata HOM05D001105 ORTHO05D003643 1.8e-09 66.2 118 36.4
HanXRQChr14g0431681 Helianthus annuus HOM05D001105 ORTHO05D003643 2.3e-09 65.9 103 37.9
arahy.Tifrunner.gnm1.ann1.KL5RV2 Arachis hypogaea HOM05D001105 ORTHO05D003643 4.0e-09 65.1 104 33.7
CsaV3_6G038580 Cucumis sativus L. HOM05D001105 ORTHO05D003643 6.8e-09 64.3 110 36.4
Gohir.A05G077900 Gossypium hirsutum HOM05D001105 ORTHO05D003643 6.8e-09 64.3 116 37.9
Nitab4.5_0001504g0090 Nicotiana tabacum HOM05D001105 ORTHO05D003643 6.8e-09 64.3 121 37.2
Psat7g204640 Pisum sativum HOM05D001105 ORTHO05D003643 6.8e-09 64.3 141 32.6
arahy.Tifrunner.gnm1.ann1.7RX9RF Arachis hypogaea HOM05D001105 ORTHO05D003643 8.9e-09 63.9 104 34.6
Nitab4.5_0000157g0160 Nicotiana tabacum HOM05D001105 ORTHO05D003643 8.9e-09 63.9 122 35.2
Oeu048824.1 Olea europaea HOM05D001105 ORTHO05D003643 1.2e-08 63.5 110 34.5
Gorai.009G082500 Gossypium raimondii HOM05D001105 ORTHO05D003643 1.5e-08 63.2 113 36.3
Sopen06g030340 Solanum pennellii HOM05D001105 ORTHO05D003643 1.5e-08 63.2 99 41.4
Gohir.D05G080700 Gossypium hirsutum HOM05D001105 ORTHO05D003643 2.6e-08 62.4 113 36.3
Oeu051475.1 Olea europaea HOM05D001105 ORTHO05D003643 2.6e-08 62.4 107 41.1
Peaxi162Scf00429g00042 Petunia axillaris HOM05D001105 ORTHO05D003643 2.6e-08 62.4 125 34.4
PGR119G1719 Punica granatum HOM05D001105 ORTHO05D003643 2.6e-08 62.4 121 31.4
CsaV3_1G043850 Cucumis sativus L. HOM05D001105 ORTHO05D003643 3.4e-08 62.0 110 39.1
PGSC0003DMG400013134 Solanum tuberosum HOM05D001105 ORTHO05D003643 3.4e-08 62.0 118 34.7
CAN.G226.29 Capsicum annuum HOM05D001105 ORTHO05D003643 4.4e-08 61.6 125 32.8
DCAR_012502 Daucus carota HOM05D001105 ORTHO05D003643 4.4e-08 61.6 116 36.2
Sc21g0006780 Simmondsia chinensis HOM05D001105 ORTHO05D003643 4.4e-08 61.6 80 41.2
ECA238G3180 Erigeron canadensis HOM05D001105 ORTHO05D003643 7.5e-08 60.8 111 35.1
Eucgr.J00324 Eucalyptus grandis HOM05D001105 ORTHO05D003643 7.5e-08 60.8 125 33.6
Manes.04G062200 Manihot esculenta HOM05D001105 ORTHO05D003643 9.9e-08 60.5 64 45.3
Solyc01g009260.1 Solanum lycopersicum HOM05D001105 ORTHO05D003643 9.9e-08 60.5 94 35.1
Sopen01g004750 Solanum pennellii HOM05D001105 ORTHO05D003643 9.9e-08 60.5 94 35.1
VMungo1127G0986 Vigna mungo HOM05D001105 ORTHO05D003643 9.9e-08 60.5 134 32.1
Cpa.g.c33086 Carica papaya HOM05D001105 ORTHO05D003643 1.7e-07 59.7 116 38.8
ClCG02G022450 Citrullus lanatus HOM05D001105 ORTHO05D003643 2.2e-07 59.3 127 32.3
CAN.G689.4 Capsicum annuum HOM05D001105 ORTHO05D003643 2.9e-07 58.9 117 37.6
TAR623G1713 Trochodendron aralioides HOM05D001105 ORTHO05D003643 2.9e-07 58.9 115 34.8
SGA_v2.0_scaffold22G09821 Striga asiatica HOM05D001105 ORTHO05D003643 3.7e-07 58.5 126 31.7
Nitab4.5_0008364g0020 Nicotiana tabacum HOM05D001105 ORTHO05D003643 6.4e-07 57.8 112 30.4
PGSC0003DMG400013130 Solanum tuberosum HOM05D001105 ORTHO05D003643 6.4e-07 57.8 118 32.2
MELO3C015055.2 Cucumis melo HOM05D001105 ORTHO05D003643 8.3e-07 57.4 110 36.4
DCAR_002708 Daucus carota HOM05D001105 ORTHO05D003643 8.3e-07 57.4 137 33.6
Sed0024938 Sechium edule HOM05D001105 ORTHO05D003643 8.3e-07 57.4 125 31.2
Lalb_Chr01g0005041 Lupinus albus HOM05D001105 ORTHO05D003643 2.4e-06 55.8 135 32.6
ClCG03G012250 Citrullus lanatus HOM05D001105 ORTHO05D003643 3.2e-06 55.5 103 35.0
GSVIVG01037588001 Vitis vinifera HOM05D001105 ORTHO05D003643 4.1e-06 55.1 108 34.3
Lalb_Chr03g0028441 Lupinus albus HOM05D001105 ORTHO05D003643 7.1e-06 54.3 135 34.1
Lalb_Chr19g0136231 Lupinus albus HOM05D001105 ORTHO05D003643 7.1e-06 54.3 131 32.8


User provided reference genes

Program Settings