Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9388 Utricularia gibba HOM05D005226 ORTHO05D004666 1.2e-50 203.0 106 100.0
unitig_749.g13630 Utricularia gibba HOM05D005226 ORTHO05D004666 1.2e-20 103.2 94 60.6
Migut.M01309 Erythranthe guttata HOM05D005226 ORTHO05D004666 2.1e-12 75.9 84 52.4
SGA_v2.0_scaffold4G01918 Striga asiatica HOM05D005226 ORTHO05D004666 6.8e-11 70.9 93 47.3
SalBow8G4932 Salvia bowleyana HOM05D005226 ORTHO05D004666 3.4e-10 68.6 91 45.1
MSTRG.13145 Avicennia marina HOM05D005226 ORTHO05D004666 5.8e-10 67.8 79 46.8
Oeu051213.1 Olea europaea HOM05D005226 ORTHO05D004666 2.2e-09 65.9 81 44.4
TAR627G0695 Trochodendron aralioides HOM05D005226 ORTHO05D004666 2.2e-09 65.9 70 54.3
CAN.G569.14 Capsicum annuum HOM05D005226 ORTHO05D004666 2.9e-09 65.5 93 44.1
CiPaw.09G090600 Carya illinoinensis HOM05D005226 ORTHO05D004666 4.9e-09 64.7 58 56.9
Sed0011520 Sechium edule HOM05D005226 ORTHO05D004666 4.9e-09 64.7 93 45.2
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 8.4e-09 63.9 82 43.9
Cc09_g01800 Coffea canephora HOM05D005226 ORTHO05D004666 1.1e-08 63.5 67 52.2
Oeu033894.1 Olea europaea HOM05D005226 ORTHO05D004666 1.1e-08 63.5 83 45.8
QL05p073519 Quercus lobata HOM05D005226 ORTHO05D004666 1.1e-08 63.5 63 54.0
QL05p073756 Quercus lobata HOM05D005226 ORTHO05D004666 1.1e-08 63.5 63 54.0
Solyc02g080450.1 Solanum lycopersicum HOM05D005226 ORTHO05D004666 1.1e-08 63.5 86 43.0
Sopen02g025140 Solanum pennellii HOM05D005226 ORTHO05D004666 1.1e-08 63.5 86 43.0
SGA_v2.0_scaffold89G27461 Striga asiatica HOM05D005226 ORTHO05D004666 1.1e-08 63.5 94 41.5
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 1.4e-08 63.2 68 47.1
Thecc.06G219100 Theobroma cacao HOM05D005226 ORTHO05D004666 1.4e-08 63.2 68 47.1
TWI38G0534 Tripterygium wilfordii HOM05D005226 ORTHO05D004666 1.4e-08 63.2 100 39.0
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla HOM05D005226 ORTHO05D004666 3.2e-08 62.0 72 50.0
Nitab4.5_0003254g0050 Nicotiana tabacum HOM05D005226 ORTHO05D004666 3.2e-08 62.0 96 42.7
Sed0005209 Sechium edule HOM05D005226 ORTHO05D004666 3.2e-08 62.0 109 33.0
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 4.1e-08 61.6 68 45.6
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 4.1e-08 61.6 68 45.6
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 4.1e-08 61.6 67 56.7
Nitab4.5_0000005g0440 Nicotiana tabacum HOM05D005226 ORTHO05D004666 4.1e-08 61.6 61 52.5
Cfa021903 Carpinus fangiana HOM05D005226 ORTHO05D004666 5.4e-08 61.2 70 48.6
CiPaw.10G070100 Carya illinoinensis HOM05D005226 ORTHO05D004666 5.4e-08 61.2 61 50.8
Sed0027353 Sechium edule HOM05D005226 ORTHO05D004666 5.4e-08 61.2 84 47.6
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 5.4e-08 61.2 70 51.4
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 5.4e-08 61.2 61 49.2
Dinv20040 Davidia involucrata HOM05D005226 ORTHO05D004666 7.1e-08 60.8 72 47.2
Eucgr.D01311 Eucalyptus grandis HOM05D005226 ORTHO05D004666 7.1e-08 60.8 62 54.8
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 7.1e-08 60.8 58 51.7
ClCG03G004790 Citrullus lanatus HOM05D005226 ORTHO05D004666 9.2e-08 60.5 90 43.3
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 9.2e-08 60.5 91 39.6
MD05G1344200 Malus domestica HOM05D005226 ORTHO05D004666 9.2e-08 60.5 83 44.6
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 1.6e-07 59.7 93 37.6
PGSC0003DMG400016491 Solanum tuberosum HOM05D005226 ORTHO05D004666 1.6e-07 59.7 80 41.2
CsaV3_6G049110 Cucumis sativus L. HOM05D005226 ORTHO05D004666 2.1e-07 59.3 93 35.5
Gohir.D10G013300 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.7e-07 58.9 68 42.6
Gorai.011G015000 Gossypium raimondii HOM05D005226 ORTHO05D004666 2.7e-07 58.9 68 42.6
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 3.5e-07 58.5 68 45.6
Duzib192G0836 Durio zibethinus HOM05D005226 ORTHO05D004666 3.5e-07 58.5 68 42.6
Eucgr.D01314 Eucalyptus grandis HOM05D005226 ORTHO05D004666 3.5e-07 58.5 87 46.0
Eucgr.E04074 Eucalyptus grandis HOM05D005226 ORTHO05D004666 3.5e-07 58.5 105 35.2
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 3.5e-07 58.5 57 50.9
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 3.5e-07 58.5 68 44.1
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 4.6e-07 58.2 66 45.5
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 4.6e-07 58.2 68 42.6
Sabra04G0009100 Salix brachista HOM05D005226 ORTHO05D004666 4.6e-07 58.2 59 52.5
DCAR_008143 Daucus carota HOM05D005226 ORTHO05D004666 6.0e-07 57.8 66 47.0
ECA234G1355 Erigeron canadensis HOM05D005226 ORTHO05D004666 6.0e-07 57.8 81 40.7
MBI18_g02740_MAGBIO Magnolia biondii HOM05D005226 ORTHO05D004666 6.0e-07 57.8 66 48.5
Aqoxy4G01362 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 7.8e-07 57.4 75 45.3
MELO3C002462.2 Cucumis melo HOM05D005226 ORTHO05D004666 7.8e-07 57.4 91 44.0
Manes.16G008100 Manihot esculenta HOM05D005226 ORTHO05D004666 7.8e-07 57.4 68 47.1
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 7.8e-07 57.4 61 50.8
Peaxi162Scf00565g00021 Petunia axillaris HOM05D005226 ORTHO05D004666 7.8e-07 57.4 67 46.3
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 7.8e-07 57.4 88 40.9
Haze_09878 Corylus avellana HOM05D005226 ORTHO05D004666 1.0e-06 57.0 66 47.0
Glyma.18G063800 Glycine max HOM05D005226 ORTHO05D004666 1.0e-06 57.0 80 40.0
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 1.0e-06 57.0 59 52.5
TPR.G7637 Trifolium pratense HOM05D005226 ORTHO05D004666 1.0e-06 57.0 61 47.5
Rhsim02G0108200 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.3e-06 56.6 67 52.2
Rhsim02G0108700 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.3e-06 56.6 63 49.2
Rhsim02G0109500 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.3e-06 56.6 63 49.2
PGSC0003DMG400004522 Solanum tuberosum HOM05D005226 ORTHO05D004666 1.3e-06 56.6 62 45.2
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 1.3e-06 56.6 91 40.7
Phvul.006G150300 Phaseolus vulgaris HOM05D005226 ORTHO05D004666 1.7e-06 56.2 61 47.5
Potri.011G002100 Populus trichocarpa HOM05D005226 ORTHO05D004666 1.7e-06 56.2 59 50.8
Eucgr.L02166 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.3e-06 55.8 87 44.8
FAN25G2807 Fragaria x ananassa HOM05D005226 ORTHO05D004666 2.3e-06 55.8 91 38.5
Nn1g03549 Nelumbo nucifera HOM05D005226 ORTHO05D004666 2.3e-06 55.8 81 49.4
Aqoxy1G03603 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 3.0e-06 55.5 100 38.0
MD00G1206700 Malus domestica HOM05D005226 ORTHO05D004666 3.0e-06 55.5 57 50.9
MD10G1320200 Malus domestica HOM05D005226 ORTHO05D004666 3.0e-06 55.5 57 50.9
CsaV3_1G010830 Cucumis sativus L. HOM05D005226 ORTHO05D004666 3.9e-06 55.1 84 46.4
Lsat_1_v5_gn_4_59601 Lactuca sativa HOM05D005226 ORTHO05D004666 3.9e-06 55.1 86 38.4
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 3.9e-06 55.1 61 47.5
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 3.9e-06 55.1 81 38.3
Eucgr.E04071 Eucalyptus grandis HOM05D005226 ORTHO05D004666 5.1e-06 54.7 105 35.2
Gorai.010G180000 Gossypium raimondii HOM05D005226 ORTHO05D004666 5.1e-06 54.7 66 42.4
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 5.1e-06 54.7 101 38.6
RcHm_v2.0_Chr5g0003391 Rosa chinensis HOM05D005226 ORTHO05D004666 5.1e-06 54.7 66 45.5
Eucgr.E04072 Eucalyptus grandis HOM05D005226 ORTHO05D004666 6.6e-06 54.3 99 34.3
FvH4_3g02270 Fragaria vesca HOM05D005226 ORTHO05D004666 6.6e-06 54.3 91 37.4


User provided reference genes

Program Settings