Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 5.3e-69 264.2 134 100.0
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 5.2e-40 167.9 131 64.9
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 1.2e-39 166.8 102 79.4
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 2.6e-39 165.6 108 76.9
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 7.5e-39 164.1 99 79.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.2e-38 162.5 107 76.6
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.9e-38 162.2 113 73.5
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.7e-38 161.8 116 71.6
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 4.9e-38 161.4 103 79.6
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 4.9e-38 161.4 103 76.7
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 6.4e-38 161.0 102 75.5
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 8.3e-38 160.6 136 63.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.1e-37 160.2 102 78.4
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.4e-37 159.8 108 74.1
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.4e-37 159.8 93 80.6
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.8e-37 159.5 93 80.6
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 2.4e-37 159.1 118 70.3
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 2.4e-37 159.1 116 71.6
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 2.4e-37 159.1 130 65.4
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.1e-37 158.3 99 74.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 4.1e-37 158.3 121 62.8
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 4.1e-37 158.3 127 65.4
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 7.0e-37 157.5 134 64.2
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 9.2e-37 157.1 102 76.5
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 9.2e-37 157.1 123 65.9
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 9.2e-37 157.1 124 64.5
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 9.2e-37 157.1 91 81.3
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 9.2e-37 157.1 91 81.3
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.2e-36 156.8 102 75.5
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.2e-36 156.8 95 80.0
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.6e-36 156.4 93 78.5
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.6e-36 156.4 84 88.1
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 2.0e-36 156.0 108 73.1
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.0e-36 156.0 125 65.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.7e-36 155.6 114 71.1
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.7e-36 155.6 101 75.2
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 2.7e-36 155.6 105 73.3
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 2.7e-36 155.6 98 77.6
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.7e-36 155.6 104 75.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.5e-36 155.2 120 67.5
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.5e-36 155.2 104 75.0
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 4.6e-36 154.8 110 72.7
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 4.6e-36 154.8 128 62.5
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 5.9e-36 154.5 119 67.2
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 5.9e-36 154.5 100 80.0
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.3e-35 153.3 90 80.0
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.3e-35 153.3 139 59.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.3e-35 153.3 91 83.5
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.3e-35 153.3 107 72.9
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 1.3e-35 153.3 125 62.4
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 1.7e-35 152.9 118 67.8
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.7e-35 152.9 109 72.5
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.7e-35 152.9 114 69.3
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 2.3e-35 152.5 143 58.0
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 2.9e-35 152.1 102 75.5
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.9e-35 152.1 115 70.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.9e-35 152.1 102 78.4
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 3.9e-35 151.8 143 59.4
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 3.9e-35 151.8 122 64.8
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 3.9e-35 151.8 148 57.4
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 3.9e-35 151.8 143 59.4
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 3.9e-35 151.8 143 59.4
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 3.9e-35 151.8 122 64.8
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 5.0e-35 151.4 85 83.5
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 5.0e-35 151.4 101 75.2
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.6e-35 151.0 93 78.5
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 6.6e-35 151.0 132 63.6
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 1.9e-34 149.4 131 61.8
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.9e-34 149.4 116 64.7
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.9e-34 149.4 134 57.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 2.5e-34 149.1 106 69.8
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 3.3e-34 148.7 102 76.5
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.3e-34 148.7 102 76.5
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 3.3e-34 148.7 144 56.2
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 3.3e-34 148.7 95 77.9
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.3e-34 148.3 109 67.9
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.3e-34 148.3 109 67.9
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 4.3e-34 148.3 116 64.7
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 5.6e-34 147.9 104 68.3
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-33 146.7 110 67.3
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 3.6e-33 145.2 85 81.2
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 3.6e-33 145.2 82 84.1
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 4.7e-33 144.8 103 71.8
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 8.0e-33 144.1 97 72.2
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.0e-32 143.7 102 72.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.0e-32 143.7 116 63.8
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.4e-32 143.3 106 68.9
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 4.0e-32 141.7 98 70.4
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 5.2e-32 141.4 114 66.7
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.2e-32 141.4 74 89.2
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-31 140.2 105 69.5
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 7.0e-29 131.0 74 79.7
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 3.0e-27 125.6 71 80.3
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 5.0e-27 124.8 118 55.1
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 8.6e-27 124.0 76 75.0
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.3e-26 122.1 131 55.7
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 4.3e-26 121.7 98 64.3
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 9.5e-26 120.6 104 57.7
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.4e-23 112.1 104 58.7
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 2.9e-22 109.0 88 63.6
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 7.1e-21 104.4 79 63.3
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.0e-19 100.5 52 86.5
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.6e-17 93.2 108 51.9
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 6.8e-16 87.8 67 73.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 3.0e-11 72.4 64 70.3


User provided reference genes

Program Settings