Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 0.0e+00 1559.7 805 100.0
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 3.2e-201 706.1 951 48.5
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 6.4e-194 681.8 987 46.1
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 4.3e-182 642.5 945 46.1
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 9.7e-174 614.8 1083 41.5
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.1e-168 597.0 1034 42.1
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.1e-158 564.7 982 41.9
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 9.7e-158 561.6 977 40.9
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.2e-155 554.7 885 43.7
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.2e-155 554.7 988 41.9
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.4e-155 553.1 885 43.6
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.9e-154 550.1 987 41.5
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 4.4e-150 536.2 971 41.3
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 3.7e-149 533.1 952 41.2
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 7.0e-148 528.9 805 45.1
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 9.1e-148 528.5 814 44.8
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 1.7e-146 524.2 958 40.9
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.7e-144 516.9 970 40.5
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.1e-140 505.0 995 39.6
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 4.1e-140 503.1 800 43.6
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 7.0e-140 502.3 949 40.4
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 4.5e-139 499.6 804 43.4
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.7e-138 497.7 861 41.5
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 3.8e-138 496.5 1052 37.5
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 8.5e-138 495.4 814 42.0
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 5.5e-137 492.7 822 43.1
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 7.2e-137 492.3 999 39.4
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 9.4e-137 491.9 783 43.8
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 3.6e-136 490.0 771 43.8
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 4.7e-136 489.6 997 39.2
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 6.1e-136 489.2 809 43.1
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 6.1e-136 489.2 818 43.4
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 8.0e-136 488.8 993 39.1
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.4e-135 488.0 815 41.7
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 3.0e-135 486.9 981 38.7
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 2.6e-134 483.8 871 41.2
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 3.4e-134 483.4 849 40.8
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.4e-134 483.0 956 39.4
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 7.5e-134 482.3 827 41.8
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.7e-133 481.1 815 41.7
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 1.4e-132 478.0 1007 38.2
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 1.4e-132 478.0 809 42.3
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 2.4e-132 477.2 968 38.6
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 4.1e-132 476.5 806 41.9
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 9.1e-132 475.3 868 39.4
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.7e-131 473.8 977 37.5
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 3.5e-131 473.4 948 38.6
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 4.5e-131 473.0 977 38.4
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 5.9e-131 472.6 984 37.8
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.7e-130 471.1 977 38.5
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.9e-130 470.3 982 37.6
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 2.5e-129 467.2 1156 34.9
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 4.2e-129 466.5 803 41.2
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 1.2e-128 464.9 797 40.5
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 4.7e-128 463.0 709 43.2
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.7e-128 463.0 794 42.1
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 1.0e-127 461.8 781 41.7
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.0e-127 461.8 811 41.3
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 1.0e-127 461.8 790 42.5
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 2.3e-127 460.7 718 43.5
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.3e-127 460.7 817 40.4
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 1.2e-126 458.4 814 40.3
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 3.4e-126 456.8 781 40.2
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 3.4e-126 456.8 894 38.4
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 2.2e-125 454.1 968 36.5
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 6.3e-125 452.6 789 40.9
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 6.3e-125 452.6 981 36.1
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 3.1e-124 450.3 963 36.4
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.7e-123 447.2 832 39.5
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 4.5e-123 446.4 894 37.1
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 7.8e-123 445.7 970 36.3
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 2.9e-122 443.7 1100 36.1
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 3.8e-122 443.4 782 39.8
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 3.8e-122 443.4 806 40.2
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 8.6e-122 442.2 781 39.6
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 8.6e-122 442.2 988 36.3
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 8.6e-122 442.2 993 37.0
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 1.1e-121 441.8 796 38.6
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 1.9e-121 441.0 781 39.6
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 3.3e-121 440.3 818 38.1
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.3e-121 440.3 845 39.6
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.3e-121 439.9 845 39.6
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 5.6e-121 439.5 787 38.9
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 5.6e-121 439.5 787 38.9
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 4.7e-120 436.4 810 38.9
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 8.0e-120 435.6 842 39.4
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 1.0e-119 435.3 810 38.0
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.4e-119 434.9 795 41.1
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.3e-119 434.1 798 39.5
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 2.3e-119 434.1 800 37.2
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.0e-119 433.7 845 39.2
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 4.0e-119 433.3 788 39.2
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 6.8e-119 432.6 982 37.8
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 6.8e-119 432.6 788 38.6
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 2.0e-118 431.0 845 39.4
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 9.8e-118 428.7 773 39.6
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 9.8e-118 428.7 921 35.9
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 9.8e-118 428.7 872 38.3
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 2.9e-117 427.2 885 36.0
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.1e-116 425.2 789 38.8
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 4.1e-116 423.3 799 38.2
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.7e-115 420.6 796 36.8
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 3.5e-115 420.2 766 40.2
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.7e-114 417.9 811 37.6
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 4.3e-113 413.3 804 39.6
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 9.5e-113 412.1 816 36.2
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.2e-112 411.8 873 38.9
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 4.7e-112 409.8 804 37.2
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 4.7e-112 409.8 877 35.7
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 8.0e-112 409.1 777 37.5
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 1.4e-111 408.3 746 39.3
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 9.8e-110 402.1 864 37.3
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 1.9e-108 397.9 955 36.8
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.4e-108 397.5 837 36.4
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 7.0e-108 396.0 1050 33.2
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.6e-107 394.8 735 38.8
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.9e-105 387.9 813 36.7
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 9.5e-105 385.6 876 35.3
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 1.2e-104 385.2 935 34.9
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 3.6e-104 383.6 792 37.6
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 4.7e-104 383.3 727 39.3
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.3e-101 375.2 973 33.9
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 1.3e-101 375.2 1040 32.2
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 3.3e-97 360.5 769 35.5
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 3.6e-96 357.1 798 34.2
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.0e-90 339.0 927 33.2
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 2.3e-90 337.8 604 40.2
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 1.4e-87 328.6 732 37.7
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.2e-83 315.5 842 31.8
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.2e-83 315.5 842 31.8
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 3.9e-82 310.5 731 37.9
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 1.2e-78 298.9 687 33.3
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 4.2e-76 290.4 446 43.5
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 1.2e-75 288.9 1084 29.7
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.3e-57 227.6 247 50.6
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 2.2e-53 214.9 658 30.4
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.6e-51 208.8 372 42.5
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.5e-49 202.2 222 48.6
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 4.1e-47 194.1 336 42.6
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 5.3e-47 193.7 386 35.5
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 2.5e-44 184.9 525 33.1
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 4.8e-40 170.6 306 42.8
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 3.2e-36 157.9 286 35.3
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 2.3e-34 151.8 138 63.8
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 5.2e-34 150.6 201 51.7
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.5e-33 149.1 119 67.2
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.2e-27 129.4 92 69.6
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 7.5e-25 120.2 157 54.1
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.2e-24 118.6 254 37.8
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 4.1e-23 114.4 156 41.7
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 1.6e-22 112.5 93 61.3
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 3.5e-22 111.3 85 67.1
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 8.0e-19 100.1 136 50.0
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 1.4e-18 99.4 78 66.7
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 4.4e-17 94.4 71 66.2
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.8e-15 89.0 115 50.4
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 2.4e-15 88.6 89 47.2
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 1.2e-14 86.3 57 75.4
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 3.5e-14 84.7 68 60.3
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 4.5e-14 84.3 135 35.6
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.0e-13 83.2 89 44.9
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 1.0e-13 83.2 118 41.5
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 1.3e-13 82.8 62 64.5
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 8.6e-13 80.1 63 71.4
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 1.1e-12 79.7 103 44.7
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.5e-12 78.6 59 66.1
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 5.5e-12 77.4 66 57.6
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 4.7e-11 74.3 67 58.2
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 1.8e-10 72.4 76 57.9
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 5.4e-07 60.8 60 45.0
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 5.4e-07 60.8 126 31.0
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.7e-06 58.5 92 39.1
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 2.7e-06 58.5 44 65.9


User provided reference genes

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