Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.1e-226 789.6 414 100.0
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.7e-54 215.7 444 39.0
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.3e-52 211.5 443 37.7
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 8.2e-44 182.2 444 35.8
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.5e-40 171.4 466 32.0
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.2e-39 168.3 438 35.8
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 6.3e-36 156.0 439 33.3
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 7.7e-34 149.1 396 31.1
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.9e-33 147.1 403 32.5
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.1e-32 145.2 404 34.4
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.2e-32 143.7 410 34.4
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 4.2e-32 143.3 416 31.5
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.5e-32 142.9 438 29.5
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.6e-31 141.4 393 30.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.0e-30 138.7 430 31.4
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 2.3e-30 137.5 431 32.0
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 4.0e-30 136.7 389 32.4
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 4.0e-30 136.7 401 29.4
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 5.2e-30 136.3 427 31.9
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 2.0e-29 134.4 407 31.9
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 4.8e-28 129.8 407 30.5
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 8.3e-28 129.0 330 32.7
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.8e-27 127.9 354 32.2
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.4e-27 127.5 408 32.1
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 5.4e-27 126.3 434 30.4
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.2e-26 125.2 397 30.5
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.0e-26 124.4 384 29.9
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 3.5e-26 123.6 382 28.5
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 3.5e-26 123.6 406 30.8
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 5.9e-26 122.9 119 52.9
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 7.7e-26 122.5 376 29.5
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 7.7e-26 122.5 445 31.9
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.7e-25 121.3 426 30.0
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.9e-25 120.6 405 30.6
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 5.0e-25 119.8 401 29.4
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 5.0e-25 119.8 95 61.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 6.5e-25 119.4 384 31.2
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 8.6e-25 119.0 196 40.3
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-24 118.2 377 28.9
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.5e-24 118.2 175 41.1
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 1.9e-24 117.9 399 28.6
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 2.5e-24 117.5 408 29.2
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 3.2e-24 117.1 263 30.0
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 4.2e-24 116.7 408 29.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 5.5e-24 116.3 369 30.9
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 9.5e-24 115.5 182 39.6
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.2e-23 115.2 377 29.7
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 1.2e-23 115.2 394 29.4
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 2.8e-23 114.0 439 27.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.8e-23 114.0 409 28.9
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 8.0e-23 112.5 208 40.4
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 8.0e-23 112.5 187 39.0
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.0e-22 112.1 423 29.1
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.4e-22 111.7 367 29.4
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.4e-22 111.7 394 30.2
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.8e-22 111.3 383 29.0
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.3e-22 110.9 387 27.1
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.3e-22 110.9 114 50.9
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 2.3e-22 110.9 125 48.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 3.0e-22 110.5 103 53.4
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 4.0e-22 110.2 391 28.4
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 6.8e-22 109.4 392 29.1
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 6.8e-22 109.4 99 56.6
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 6.8e-22 109.4 431 28.8
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 8.8e-22 109.0 206 37.4
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 8.8e-22 109.0 346 28.6
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.8e-22 109.0 405 28.4
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 8.8e-22 109.0 190 37.4
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.2e-21 108.6 410 28.0
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 2.0e-21 107.8 219 35.2
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.0e-21 107.8 386 31.1
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.4e-21 106.7 382 28.0
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 7.5e-21 105.9 100 54.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 7.5e-21 105.9 389 30.3
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 9.8e-21 105.5 395 27.6
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 9.8e-21 105.5 82 59.8
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 2.2e-20 104.4 407 28.3
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 2.2e-20 104.4 82 56.1
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.8e-20 104.0 388 29.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 2.8e-20 104.0 178 37.1
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.9e-20 103.2 100 52.0
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.1e-19 102.1 387 30.2
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 1.4e-19 101.7 412 26.2
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.4e-19 100.9 99 51.5
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.1e-19 100.5 408 27.9
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.1e-19 100.1 97 49.5
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 5.4e-19 99.8 436 27.3
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 5.4e-19 99.8 436 27.3
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 9.2e-19 99.0 90 54.4
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-18 98.6 98 53.1
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-18 98.6 98 53.1
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.2e-18 98.6 104 47.1
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 2.0e-18 97.8 93 49.5
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.0e-18 97.8 84 56.0
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.7e-18 97.4 93 53.8
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 3.5e-18 97.1 432 26.4
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 5.9e-18 96.3 431 26.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.0e-17 95.5 442 27.1
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.3e-17 94.4 180 34.4
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 2.9e-17 94.0 99 51.5
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.9e-17 94.0 94 51.1
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 8.6e-17 92.4 104 44.2
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 8.6e-17 92.4 410 25.6
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.1e-16 92.0 85 50.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.5e-16 91.7 392 26.8
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.5e-16 91.7 377 26.8
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.9e-16 91.3 193 34.7
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.5e-16 90.9 417 25.4
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 6.1e-15 86.3 52 75.0
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.8e-14 84.7 101 45.5
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.2e-13 82.0 56 69.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 3.4e-13 80.5 165 32.7
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-12 78.6 57 61.4
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.3e-12 78.6 406 26.8
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 6.4e-12 76.3 164 31.1
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.7e-10 70.9 48 62.5
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.9e-10 69.7 48 66.7
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 5.0e-09 66.6 44 65.9
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 1.2e-07 62.0 151 31.1
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.4e-06 58.5 67 40.3
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.1e-06 57.4 80 40.0
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 3.1e-06 57.4 73 41.1
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 6.8e-06 56.2 62 45.2


User provided reference genes

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