Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.0e-309 1065.8 511 100.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.3e-240 836.3 484 78.9
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 1.5e-233 812.8 478 78.7
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.2e-231 804.7 492 76.0
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 6.7e-229 797.3 492 75.6
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.3e-228 795.0 492 73.8
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.0e-225 785.8 499 72.7
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.8e-224 781.6 496 74.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.9e-223 779.2 497 73.2
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.3e-221 772.3 497 73.6
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-220 770.0 497 73.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.9e-220 769.2 497 73.0
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.5e-220 768.8 497 73.0
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 4.3e-220 768.1 561 65.2
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.4e-218 763.1 491 73.3
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.1e-218 761.9 497 71.2
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.1e-218 761.9 498 72.1
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 4.1e-218 761.5 497 71.8
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.3e-218 761.1 497 72.6
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.3e-216 756.5 497 72.2
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.2e-216 755.7 496 72.6
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 2.9e-216 755.4 497 72.4
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 8.5e-216 753.8 499 71.9
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.6e-214 748.0 501 70.9
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.1e-214 747.7 500 70.6
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 6.1e-214 747.7 497 71.4
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.3e-213 746.5 501 71.5
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.8e-213 746.1 499 70.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.0e-213 745.3 495 71.1
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 5.1e-213 744.6 496 71.2
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.5e-212 743.0 494 72.1
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-212 743.0 499 70.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-212 743.0 499 70.1
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.5e-212 743.0 502 71.1
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 2.5e-212 742.3 494 71.7
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.3e-212 741.9 499 70.9
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 4.3e-212 741.5 506 69.2
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 7.4e-212 740.7 503 69.6
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 9.7e-212 740.3 495 71.7
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.8e-211 738.8 495 71.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 3.7e-211 738.4 503 69.8
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.4e-210 735.7 511 68.9
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 3.1e-210 735.3 505 70.7
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 4.5e-209 731.5 516 69.2
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 5.9e-209 731.1 507 69.4
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.0e-208 730.3 506 67.0
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 2.2e-208 729.2 532 66.2
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 3.8e-208 728.4 503 68.8
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 6.5e-208 727.6 498 68.7
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 3.2e-207 725.3 505 68.7
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 3.2e-207 725.3 497 70.0
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 7.2e-207 724.2 497 68.2
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 9.4e-207 723.8 495 69.3
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 9.4e-207 723.8 495 69.3
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 9.4e-207 723.8 498 68.1
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 9.4e-207 723.8 503 68.0
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 9.4e-207 723.8 497 68.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.2e-206 723.4 496 69.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.2e-206 723.4 510 67.1
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 6.1e-206 721.1 489 69.7
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 3.0e-205 718.8 512 68.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 3.9e-205 718.4 488 67.8
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 5.1e-205 718.0 500 67.2
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 5.1e-205 718.0 524 67.6
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 8.8e-205 717.2 497 68.0
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.1e-204 716.8 496 69.0
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.1e-204 716.8 496 70.6
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 4.4e-204 714.9 498 67.3
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 7.4e-204 714.1 501 69.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.2e-203 712.6 501 66.7
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 4.8e-203 711.4 498 67.1
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 4.8e-203 711.4 498 67.1
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 1.4e-202 709.9 511 67.3
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.8e-202 709.5 510 66.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 9.1e-202 707.2 495 68.9
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 2.6e-201 705.7 523 64.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.6e-201 705.7 499 65.7
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.4e-201 705.3 499 65.7
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 3.4e-201 705.3 514 66.7
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.0e-200 703.7 527 63.9
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 4.2e-199 698.4 494 66.4
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 8.8e-197 690.6 495 65.7
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.3e-195 686.8 455 71.2
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.4e-194 683.3 524 62.6
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.8e-194 682.9 510 63.1
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.4e-194 682.6 493 65.5
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.6e-193 679.9 495 64.4
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 7.2e-191 671.0 526 61.8
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.2e-190 670.2 492 65.9
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.5e-188 663.3 526 61.2
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 6.5e-184 647.9 489 63.4
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.1e-183 647.1 429 69.7
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.2e-182 643.7 425 71.3
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.8e-179 631.7 487 61.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.4e-173 613.6 520 57.3
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 2.3e-173 612.8 503 59.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.2e-173 611.7 354 79.4
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 3.7e-171 605.5 511 59.1
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.4e-170 603.6 485 58.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 7.0e-170 601.3 500 59.6
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.7e-166 588.6 374 72.5
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 5.8e-156 555.1 408 66.7
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 4.2e-122 442.6 405 52.3
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 7.6e-116 421.8 406 49.8
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 9.9e-116 421.4 258 74.4
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.0e-112 411.4 387 51.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.3e-112 411.0 384 50.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.7e-107 394.0 394 47.2
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.8e-72 277.7 174 73.6
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.8e-64 251.1 162 67.9
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 3.5e-52 210.3 120 79.2
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 3.5e-36 157.1 319 32.9
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 9.5e-34 149.1 112 65.2
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.4e-29 135.2 123 54.5
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.5e-20 104.0 81 50.6
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 8.4e-14 82.8 55 63.6
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.1e-12 78.2 68 51.5
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.1e-12 78.2 68 51.5
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.1e-12 78.2 68 51.5
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 7.6e-07 59.7 114 28.1
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 9.9e-07 59.3 58 41.4


User provided reference genes

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