Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9330 Utricularia gibba HOM05D002191 ORTHO05D002292 1.7e-106 389.4 209 100.0
unitig_749.g13677 Utricularia gibba HOM05D002191 ORTHO05D002292 2.4e-76 289.3 211 77.3
SalBow6G0651 Salvia bowleyana HOM05D002191 ORTHO05D002292 2.8e-56 222.6 217 62.7
MSTRG.22258 Avicennia marina HOM05D002191 ORTHO05D002292 8.9e-55 217.6 234 57.3
Migut.N02715 Erythranthe guttata HOM05D002191 ORTHO05D002292 2.2e-53 213.0 214 60.7
Nitab4.5_0008020g0020 Nicotiana tabacum HOM05D002191 ORTHO05D002292 7.3e-49 198.0 215 56.7
Nitab4.5_0000287g0220 Nicotiana tabacum HOM05D002191 ORTHO05D002292 2.8e-48 196.1 215 56.7
Oeu012422.2 Olea europaea HOM05D002191 ORTHO05D002292 2.8e-48 196.1 214 58.9
PGSC0003DMG401008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 1.5e-46 190.3 217 56.7
PGSC0003DMG402008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 2.2e-45 186.4 218 56.4
Cc10_g04500 Coffea canephora HOM05D002191 ORTHO05D002292 4.9e-45 185.3 217 58.5
GSVIVG01009482001 Vitis vinifera HOM05D002191 ORTHO05D002292 1.1e-44 184.1 216 56.0
Dinv35950 Davidia involucrata HOM05D002191 ORTHO05D002292 5.4e-44 181.8 196 56.6
Solyc04g078810.4 Solanum lycopersicum HOM05D002191 ORTHO05D002292 5.4e-44 181.8 217 54.4
CAN.G1030.13 Capsicum annuum HOM05D002191 ORTHO05D002292 7.1e-44 181.4 210 55.7
Sopen04g032410 Solanum pennellii HOM05D002191 ORTHO05D002292 1.0e-42 177.6 218 54.1
Lj4C771T16 Lonicera japonica HOM05D002191 ORTHO05D002292 6.6e-42 174.9 198 56.6
Actinidia38062 Actinidia chinensis HOM05D002191 ORTHO05D002292 8.7e-42 174.5 196 54.1
Cpa.g.sc49.29 Carica papaya HOM05D002191 ORTHO05D002292 1.1e-41 174.1 206 52.9
Peaxi162Scf00458g00318 Petunia axillaris HOM05D002191 ORTHO05D002292 1.5e-41 173.7 200 55.5
Hma1.2p1_0360F.1_g135580 Hydrangea macrophylla HOM05D002191 ORTHO05D002292 1.3e-40 170.6 216 53.2
Duzib041G0280 Durio zibethinus HOM05D002191 ORTHO05D002292 2.8e-40 169.5 214 51.9
Ciclev10000692m.g Citrus clementina HOM05D002191 ORTHO05D002292 8.1e-40 167.9 226 51.8
Dinv39306 Davidia involucrata HOM05D002191 ORTHO05D002292 1.1e-39 167.5 213 52.1
SGA_v2.0_scaffold28G11779 Striga asiatica HOM05D002191 ORTHO05D002292 1.4e-39 167.2 245 49.4
Atru.chr13.706_Atru.chr13.707 Acer truncatum HOM05D002191 ORTHO05D002292 3.1e-39 166.0 212 51.4
COL.COLO4_26522 Corchorus olitorius HOM05D002191 ORTHO05D002292 3.1e-39 166.0 223 51.1
Manes.05G174600 Manihot esculenta HOM05D002191 ORTHO05D002292 5.3e-39 165.2 231 51.9
Manes.18G038200 Manihot esculenta HOM05D002191 ORTHO05D002292 3.4e-38 162.5 232 50.4
CANSAT25G2991 Cannabis sativa HOM05D002191 ORTHO05D002292 4.4e-38 162.2 207 55.1
Potri.014G027900 Populus trichocarpa HOM05D002191 ORTHO05D002292 9.9e-38 161.0 209 54.5
Duzib093G1665 Durio zibethinus HOM05D002191 ORTHO05D002292 2.2e-37 159.8 223 50.7
Sed0013931 Sechium edule HOM05D002191 ORTHO05D002292 2.9e-37 159.5 200 51.0
CSS0019866 Camellia sinensis var. sinensis HOM05D002191 ORTHO05D002292 4.9e-37 158.7 196 52.6
Duzib116G0100 Durio zibethinus HOM05D002191 ORTHO05D002292 4.9e-37 158.7 222 50.5
vmacro04445 Vaccinium macrocarpon HOM05D002191 ORTHO05D002292 8.4e-37 157.9 259 44.0
MELO3C010849.2 Cucumis melo HOM05D002191 ORTHO05D002292 1.4e-36 157.1 200 50.5
Prupe.1G434200 Prunus persica HOM05D002191 ORTHO05D002292 3.2e-36 156.0 208 51.0
QL02p004649 Quercus lobata HOM05D002191 ORTHO05D002292 4.2e-36 155.6 227 49.3
Eucgr.F02334 Eucalyptus grandis HOM05D002191 ORTHO05D002292 1.6e-35 153.7 198 50.0
Cfa018086 Carpinus fangiana HOM05D002191 ORTHO05D002292 3.5e-35 152.5 209 52.6
Potri.002G125200 Populus trichocarpa HOM05D002191 ORTHO05D002292 3.5e-35 152.5 208 50.0
SGA_v2.0_scaffold14G06995 Striga asiatica HOM05D002191 ORTHO05D002292 6.0e-35 151.8 209 52.6
CiPaw.15G055500 Carya illinoinensis HOM05D002191 ORTHO05D002292 1.0e-34 151.0 203 52.2
MD08G1098900 Malus domestica HOM05D002191 ORTHO05D002292 1.0e-34 151.0 198 50.0
CiPaw.16G042600 Carya illinoinensis HOM05D002191 ORTHO05D002292 1.7e-34 150.2 220 50.0
Actinidia22638 Actinidia chinensis HOM05D002191 ORTHO05D002292 2.3e-34 149.8 203 49.3
Sabra02G0098300 Salix brachista HOM05D002191 ORTHO05D002292 3.0e-34 149.4 206 50.5
AUR62031368 Chenopodium quinoa HOM05D002191 ORTHO05D002292 3.9e-34 149.1 198 54.0
Gorai.009G212800 Gossypium raimondii HOM05D002191 ORTHO05D002292 1.5e-33 147.1 221 50.2
Sc02g0007200 Simmondsia chinensis HOM05D002191 ORTHO05D002292 1.5e-33 147.1 220 48.6
Gohir.A06G019100 Gossypium hirsutum HOM05D002191 ORTHO05D002292 1.9e-33 146.7 221 48.0
Nn5g30283 Nelumbo nucifera HOM05D002191 ORTHO05D002292 1.9e-33 146.7 221 45.2
DCAR_008800 Daucus carota HOM05D002191 ORTHO05D002292 3.3e-33 146.0 213 46.0
AUR62043210 Chenopodium quinoa HOM05D002191 ORTHO05D002292 5.6e-33 145.2 198 53.5
THA.LOC104814166 Tarenaya hassleriana HOM05D002191 ORTHO05D002292 5.6e-33 145.2 196 49.0
TWI36G0260 Tripterygium wilfordii HOM05D002191 ORTHO05D002292 5.6e-33 145.2 215 49.3
RcHm_v2.0_Chr6g0308061 Rosa chinensis HOM05D002191 ORTHO05D002292 9.6e-33 144.4 206 47.6
Actinidia23286 Actinidia chinensis HOM05D002191 ORTHO05D002292 1.3e-32 144.1 195 48.7
ClCG08G016010 Citrullus lanatus HOM05D002191 ORTHO05D002292 1.6e-32 143.7 221 45.2
Nn1g04838 Nelumbo nucifera HOM05D002191 ORTHO05D002292 1.6e-32 143.7 203 49.8
PGR031G3008 Punica granatum HOM05D002191 ORTHO05D002292 1.6e-32 143.7 213 47.9
Sabra14G0019000 Salix brachista HOM05D002191 ORTHO05D002292 1.6e-32 143.7 212 50.5
Gohir.A05G203300 Gossypium hirsutum HOM05D002191 ORTHO05D002292 2.8e-32 142.9 221 48.4
VMungo0647G1146 Vigna mungo HOM05D002191 ORTHO05D002292 2.8e-32 142.9 247 46.6
Gorai.010G020400 Gossypium raimondii HOM05D002191 ORTHO05D002292 3.6e-32 142.5 226 49.6
arahy.Tifrunner.gnm1.ann1.CE0UAC Arachis hypogaea HOM05D002191 ORTHO05D002292 8.1e-32 141.4 214 46.7
arahy.Tifrunner.gnm1.ann1.ZNK5XH Arachis hypogaea HOM05D002191 ORTHO05D002292 8.1e-32 141.4 214 46.7
Rhsim07G0228000 Rhododendron simsii HOM05D002191 ORTHO05D002292 8.1e-32 141.4 210 49.0
TWI56G0639 Tripterygium wilfordii HOM05D002191 ORTHO05D002292 2.4e-31 139.8 200 51.0
Lalb_Chr14g0368621 Lupinus albus HOM05D002191 ORTHO05D002292 3.1e-31 139.4 232 46.6
Hund24033 Selenicereus undatus HOM05D002191 ORTHO05D002292 3.1e-31 139.4 219 47.5
Hund30799 Selenicereus undatus HOM05D002191 ORTHO05D002292 3.1e-31 139.4 219 47.5
TPR.G3808 Trifolium pratense HOM05D002191 ORTHO05D002292 5.3e-31 138.7 227 48.5
Glyma.17G241500 Glycine max HOM05D002191 ORTHO05D002292 1.5e-30 137.1 247 44.5
Phvul.001G022700 Phaseolus vulgaris HOM05D002191 ORTHO05D002292 2.6e-30 136.3 247 46.2
Ah.05g167380 Amaranthus hybridus HOM05D002191 ORTHO05D002292 5.8e-30 135.2 214 46.7
FAN27G2558 Fragaria x ananassa HOM05D002191 ORTHO05D002292 7.6e-30 134.8 209 45.5
FvH4_2g34300 Fragaria vesca HOM05D002191 ORTHO05D002292 9.9e-30 134.4 215 46.0
FAN24G1847 Fragaria x ananassa HOM05D002191 ORTHO05D002292 9.9e-30 134.4 215 46.0
Lj5g0008906 Lotus japonicus HOM05D002191 ORTHO05D002292 9.9e-30 134.4 244 43.9
Lalb_Chr22g0355071 Lupinus albus HOM05D002191 ORTHO05D002292 9.9e-30 134.4 198 48.5
Lalb_Chr24g0399281 Lupinus albus HOM05D002191 ORTHO05D002292 9.9e-30 134.4 218 46.8
Psat6g012960 Pisum sativum HOM05D002191 ORTHO05D002292 2.9e-29 132.9 218 47.2
THA.LOC104812570 Tarenaya hassleriana HOM05D002191 ORTHO05D002292 3.8e-29 132.5 194 45.4
Glyma.14G083500 Glycine max HOM05D002191 ORTHO05D002292 2.4e-28 129.8 241 44.0
FAN15G0638 Fragaria x ananassa HOM05D002191 ORTHO05D002292 1.2e-27 127.5 209 45.5
EL10As7g23741 Beta vulgaris HOM05D002191 ORTHO05D002292 1.6e-27 127.1 195 48.2
Lj1g0019274 Lotus japonicus HOM05D002191 ORTHO05D002292 1.6e-27 127.1 224 44.2
Sed0001622 Sechium edule HOM05D002191 ORTHO05D002292 4.6e-27 125.6 199 45.2
AL1G52870 Arabidopsis lyrata HOM05D002191 ORTHO05D002292 6.0e-27 125.2 196 48.0
HanXRQChr16g0508151 Helianthus annuus HOM05D002191 ORTHO05D002292 6.0e-27 125.2 199 50.8
TAR625G0689 Trochodendron aralioides HOM05D002191 ORTHO05D002292 6.0e-27 125.2 210 44.3
Aa31sc633G10 Aethionema arabicum HOM05D002191 ORTHO05D002292 7.9e-27 124.8 195 44.1
HanXRQChr09g0267531 Helianthus annuus HOM05D002191 ORTHO05D002292 1.0e-26 124.4 197 47.2
Medtr1g019280 Medicago truncatula HOM05D002191 ORTHO05D002292 1.0e-26 124.4 229 43.7
Rhsim06G0051000 Rhododendron simsii HOM05D002191 ORTHO05D002292 1.0e-26 124.4 208 42.8
Peaxi162Scf00010g02712 Petunia axillaris HOM05D002191 ORTHO05D002292 1.3e-26 124.0 210 41.9
DCAR_012780 Daucus carota HOM05D002191 ORTHO05D002292 1.8e-26 123.6 159 49.1
FAN20G2633 Fragaria x ananassa HOM05D002191 ORTHO05D002292 1.8e-26 123.6 208 45.7
Carub.0001s3564 Capsella rubella HOM05D002191 ORTHO05D002292 2.3e-26 123.2 203 47.8
Gohir.D05G206400 Gossypium hirsutum HOM05D002191 ORTHO05D002292 2.3e-26 123.2 220 44.1
AT1G45207 Arabidopsis thaliana HOM05D002191 ORTHO05D002292 5.1e-26 122.1 209 43.1
Sc15g0006070 Simmondsia chinensis HOM05D002191 ORTHO05D002292 1.5e-25 120.6 221 45.7
Gohir.D06G017500 Gossypium hirsutum HOM05D002191 ORTHO05D002292 5.6e-25 118.6 225 44.9
Thhalv10011395m.g Eutrema salsugineum HOM05D002191 ORTHO05D002292 7.4e-25 118.2 191 44.0
Sp1g34030 Schrenkiella parvula HOM05D002191 ORTHO05D002292 7.4e-25 118.2 193 45.6
Lsat_1_v5_gn_1_21220 Lactuca sativa HOM05D002191 ORTHO05D002292 9.6e-25 117.9 204 43.6
Actinidia29875 Actinidia chinensis HOM05D002191 ORTHO05D002292 4.8e-24 115.5 151 46.4
ECA232G3719 Erigeron canadensis HOM05D002191 ORTHO05D002292 4.8e-24 115.5 172 47.1
HanXRQChr04g0103161 Helianthus annuus HOM05D002191 ORTHO05D002292 4.0e-23 112.5 194 45.4
Lsat_1_v5_gn_4_126520 Lactuca sativa HOM05D002191 ORTHO05D002292 5.3e-23 112.1 201 44.8
Nitab4.5_0001692g0010 Nicotiana tabacum HOM05D002191 ORTHO05D002292 5.3e-23 112.1 209 43.1
ClCG05G019940 Citrullus lanatus HOM05D002191 ORTHO05D002292 6.9e-23 111.7 203 41.9
TAR381G1221 Trochodendron aralioides HOM05D002191 ORTHO05D002292 3.4e-22 109.4 192 42.7
CsaV3_4G034380 Cucumis sativus L. HOM05D002191 ORTHO05D002292 7.6e-22 108.2 217 41.0
MD15G1081400 Malus domestica HOM05D002191 ORTHO05D002292 2.2e-21 106.7 135 47.4
Ca_13287_v3 Cicer arietinum L. HOM05D002191 ORTHO05D002292 4.9e-21 105.5 214 41.1
TAR628G0699 Trochodendron aralioides HOM05D002191 ORTHO05D000877 4.9e-21 105.5 174 44.3
BcaC07g37263 Brassica carinata HOM05D002191 ORTHO05D002292 6.5e-21 105.1 193 43.0
BolC8t47535H Brassica oleracea HOM05D002191 ORTHO05D002292 6.5e-21 105.1 193 43.0
PSO541G0213 Papaver somniferum HOM05D002191 ORTHO05D002292 1.1e-20 104.4 196 42.3
Thecc.08G005500 Theobroma cacao HOM05D002191 ORTHO05D002292 3.2e-20 102.8 132 50.0
MELO3C016759.2 Cucumis melo HOM05D002191 ORTHO05D002292 4.2e-20 102.4 217 39.6
A08p06150 Brassica napus HOM05D002191 ORTHO05D002292 1.6e-19 100.5 195 43.1
C08p06930 Brassica napus HOM05D002191 ORTHO05D002292 2.1e-19 100.1 196 41.3
Sed0023242 Sechium edule HOM05D002191 ORTHO05D002292 2.7e-19 99.8 196 39.8
BraA08t32615Z Brassica rapa HOM05D002191 ORTHO05D002292 3.5e-19 99.4 195 42.6
Nitab4.5_0005942g0010 Nicotiana tabacum HOM05D002191 ORTHO05D002292 4.6e-19 99.0 209 40.7
CAN.G222.148 Capsicum annuum HOM05D002870 ORTHO05D003241 1.0e-18 97.8 100 54.0
PSO675G8389 Papaver somniferum HOM05D002191 ORTHO05D002292 1.0e-18 97.8 191 40.8
vmacro21513 Vaccinium macrocarpon HOM05D002191 ORTHO05D002292 3.0e-18 96.3 195 41.5
BcaB04g17568 Brassica carinata HOM05D002191 ORTHO05D002292 6.7e-18 95.1 192 40.6
CARHR036350 Cardamine hirsuta HOM05D002191 ORTHO05D002292 8.7e-18 94.7 194 40.7
Nn5g30281 Nelumbo nucifera HOM05D002191 ORTHO05D002292 7.4e-17 91.7 104 50.0
PSO210G1256 Papaver somniferum HOM05D002191 ORTHO05D002292 2.1e-16 90.1 215 37.2
CDE04G1850 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 8.2e-16 88.2 196 37.8
PSO170G4868 Papaver somniferum HOM05D002191 ORTHO05D002292 6.9e-15 85.1 216 36.6
CAN.G74.2 Capsicum annuum HOM05D004995 ORTHO05D002292 2.9e-13 79.7 130 45.4
ECA247G1568 Erigeron canadensis HOM05D002191 ORTHO05D002292 2.5e-12 76.6 143 39.2
MBI03_g13476_MAGBIO Magnolia biondii HOM05D002191 ORTHO05D002292 5.5e-12 75.5 207 37.2
CDE08G1143 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 8.7e-10 68.2 223 32.3
Hma1.2p1_2112F.1_g314230 Hydrangea macrophylla HOM05D002191 ORTHO05D031251 1.8e-07 60.5 47 72.3
Glyma.03G083500 Glycine max HOM05D002191 ORTHO05D002292 2.0e-06 57.0 119 38.7


User provided reference genes

Program Settings