Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9298 Utricularia gibba HOM05D004502 ORTHO05D005579 3.0e-190 668.3 329 100.0
SGA_v2.0_scaffold95G28821 Striga asiatica HOM05D004502 ORTHO05D005579 6.4e-124 448.0 309 71.5
SalBow3G3684 Salvia bowleyana HOM05D004502 ORTHO05D005579 1.6e-122 443.4 329 67.8
Migut.B01778 Erythranthe guttata HOM05D004502 ORTHO05D005579 2.3e-121 439.5 319 69.6
Lj9C585G14 Lonicera japonica HOM05D004502 ORTHO05D005579 8.1e-119 431.0 323 65.3
Actinidia14191 Actinidia chinensis HOM05D004502 ORTHO05D005579 2.4e-115 419.5 319 63.3
GSVIVG01027000001 Vitis vinifera HOM05D004502 ORTHO05D005579 2.3e-113 412.9 321 62.9
Rhsim01G0146800 Rhododendron simsii HOM05D004502 ORTHO05D005579 1.1e-112 410.6 326 62.3
Oeu052960.2 Olea europaea HOM05D004502 ORTHO05D005579 7.3e-112 407.9 344 59.3
MSTRG.17285 Avicennia marina HOM05D004502 ORTHO05D005579 1.2e-111 407.1 318 63.5
ECA234G4483 Erigeron canadensis HOM05D004502 ORTHO05D005579 3.6e-111 405.6 321 60.7
Hma1.2p1_0071F.1_g037745 Hydrangea macrophylla HOM05D004502 ORTHO05D005579 1.1e-110 404.1 319 59.2
CSS0020518 Camellia sinensis var. sinensis HOM05D004502 ORTHO05D005579 1.8e-110 403.3 320 61.9
CAN.G78.100 Capsicum annuum HOM05D004502 ORTHO05D005579 3.1e-110 402.5 327 59.6
Actinidia20888 Actinidia chinensis HOM05D004502 ORTHO05D005579 4.4e-109 398.7 320 61.9
HanXRQChr17g0562371 Helianthus annuus HOM05D004502 ORTHO05D005579 5.8e-109 398.3 323 60.1
Thecc.01G356300 Theobroma cacao HOM05D004502 ORTHO05D005579 6.4e-108 394.8 319 61.1
Cc02_g38300 Coffea canephora HOM05D004502 ORTHO05D005579 8.4e-108 394.4 322 59.0
Eucgr.E00113 Eucalyptus grandis HOM05D004502 ORTHO05D005579 8.4e-108 394.4 316 62.3
Lsat_1_v5_gn_4_34660 Lactuca sativa HOM05D004502 ORTHO05D005579 8.4e-108 394.4 316 60.4
Manes.01G254800 Manihot esculenta HOM05D004502 ORTHO05D005579 8.4e-108 394.4 319 60.2
ECA236G0795 Erigeron canadensis HOM05D004502 ORTHO05D005579 1.4e-107 393.7 322 59.0
Rhsim07G0013000 Rhododendron simsii HOM05D004502 ORTHO05D005579 1.9e-107 393.3 320 59.7
Duzib133G0971 Durio zibethinus HOM05D004502 ORTHO05D005579 2.4e-107 392.9 319 61.4
Peaxi162Scf00020g01028 Petunia axillaris HOM05D004502 ORTHO05D005579 2.4e-107 392.9 327 59.0
PGR042G2088 Punica granatum HOM05D004502 ORTHO05D005579 2.4e-107 392.9 323 60.7
TWI23G1305 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 3.5e-106 389.0 319 59.6
Cpa.g.sc11.33 Carica papaya HOM05D004502 ORTHO05D005579 4.6e-106 388.7 319 58.9
COL.COLO4_12736 Corchorus olitorius HOM05D004502 ORTHO05D005579 7.8e-106 387.9 316 59.8
Gorai.007G101400 Gossypium raimondii HOM05D004502 ORTHO05D005579 1.7e-105 386.7 319 59.6
TAR629G1389 Trochodendron aralioides HOM05D004502 ORTHO05D005579 1.7e-105 386.7 316 60.4
Dinv32500 Davidia involucrata HOM05D004502 ORTHO05D005579 3.0e-105 386.0 356 54.5
Ciclev10018851m.g Citrus clementina HOM05D004502 ORTHO05D005579 5.1e-105 385.2 328 58.2
QL04p054124 Quercus lobata HOM05D004502 ORTHO05D005579 5.1e-105 385.2 316 59.2
Gohir.D11G095000 Gossypium hirsutum HOM05D004502 ORTHO05D005579 6.6e-105 384.8 319 59.2
Sabra14G0063300 Salix brachista HOM05D004502 ORTHO05D005579 6.6e-105 384.8 338 56.8
DCAR_008618 Daucus carota HOM05D004502 ORTHO05D005579 1.5e-104 383.6 321 58.9
PGSC0003DMG400000181 Solanum tuberosum HOM05D004502 ORTHO05D005579 3.3e-104 382.5 320 57.8
Potri.014G087300 Populus trichocarpa HOM05D004502 ORTHO05D005579 4.3e-104 382.1 320 59.1
Sed0001889 Sechium edule HOM05D004502 ORTHO05D005579 1.6e-103 380.2 326 57.7
Solyc01g094860.4 Solanum lycopersicum HOM05D004502 ORTHO05D005579 1.6e-103 380.2 327 57.8
Thhalv10001314m.g Eutrema salsugineum HOM05D004502 ORTHO05D005579 2.8e-103 379.4 318 57.9
HanXRQChr06g0170231 Helianthus annuus HOM05D004502 ORTHO05D005579 2.8e-103 379.4 323 57.0
Sopen01g038640 Solanum pennellii HOM05D004502 ORTHO05D005579 2.8e-103 379.4 327 57.5
Atru.chr5.526 Acer truncatum HOM05D004502 ORTHO05D005579 4.8e-103 378.6 321 59.5
Haze_15535 Corylus avellana HOM05D004502 ORTHO05D005579 4.8e-103 378.6 321 57.9
Aa31LG1G27460 Aethionema arabicum HOM05D004502 ORTHO05D005579 1.4e-102 377.1 318 59.1
Nn1g01586 Nelumbo nucifera HOM05D004502 ORTHO05D005579 3.1e-102 375.9 319 57.7
Sed0014632 Sechium edule HOM05D004502 ORTHO05D005579 3.1e-102 375.9 323 56.7
Gorai.004G159100 Gossypium raimondii HOM05D004502 ORTHO05D005579 4.0e-102 375.6 319 59.6
Gohir.A08G131800 Gossypium hirsutum HOM05D004502 ORTHO05D005579 9.0e-102 374.4 319 59.2
Nn6g33342 Nelumbo nucifera HOM05D004502 ORTHO05D005579 1.5e-101 373.6 318 58.8
CiPaw.01G063800 Carya illinoinensis HOM05D004502 ORTHO05D005579 7.6e-101 371.3 319 57.1
CARHR141310 Cardamine hirsuta HOM05D004502 ORTHO05D005579 9.9e-101 370.9 318 57.2
Glyma.07G068700 Glycine max HOM05D004502 ORTHO05D005579 9.9e-101 370.9 322 54.7
CsaV3_6G000710 Cucumis sativus L. HOM05D004502 ORTHO05D005579 1.7e-100 370.2 327 56.6
Glyma.16G034551 Glycine max HOM05D004502 ORTHO05D005579 1.7e-100 370.2 322 55.3
AL4G45280 Arabidopsis lyrata HOM05D004502 ORTHO05D005579 2.2e-100 369.8 318 57.9
MD07G1133800 Malus domestica HOM05D004502 ORTHO05D005579 2.2e-100 369.8 324 56.2
Hund16660 Selenicereus undatus HOM05D004502 ORTHO05D005579 6.4e-100 368.2 321 57.6
AT2G46060 Arabidopsis thaliana HOM05D004502 ORTHO05D005579 1.4e-99 367.1 318 57.5
MELO3C021198.2 Cucumis melo HOM05D004502 ORTHO05D005579 1.9e-99 366.7 303 58.7
PSO478G3176 Papaver somniferum HOM05D004502 ORTHO05D005579 2.4e-99 366.3 319 53.9
A04p34250 Brassica napus HOM05D004502 ORTHO05D005579 4.2e-99 365.5 318 56.3
THA.LOC104802040 Tarenaya hassleriana HOM05D004502 ORTHO05D005579 4.2e-99 365.5 320 57.8
C04p72070 Brassica napus HOM05D004502 ORTHO05D005579 7.1e-99 364.8 318 56.3
Nitab4.5_0010258g0020 Nicotiana tabacum HOM05D004502 ORTHO05D005579 7.1e-99 364.8 320 56.6
PSO782G3525 Papaver somniferum HOM05D004502 ORTHO05D005579 9.3e-99 364.4 319 54.2
Carub.0004s2875 Capsella rubella HOM05D004502 ORTHO05D005579 1.6e-98 363.6 318 56.6
Glyma.09G257000 Glycine max HOM05D004502 ORTHO05D005579 2.1e-98 363.2 321 54.2
arahy.Tifrunner.gnm1.ann1.0GN1Z3 Arachis hypogaea HOM05D004502 ORTHO05D005579 3.5e-98 362.5 318 55.7
C04p06950 Brassica napus HOM05D004502 ORTHO05D005579 3.5e-98 362.5 318 55.3
BolC4t22316H Brassica oleracea HOM05D004502 ORTHO05D005579 3.5e-98 362.5 318 55.3
BraA04t18886Z Brassica rapa HOM05D004502 ORTHO05D005579 4.6e-98 362.1 318 56.0
Lj3g0021790 Lotus japonicus HOM05D004502 ORTHO05D005579 4.6e-98 362.1 324 54.9
Medtr8g028875 Medicago truncatula HOM05D004502 ORTHO05D005579 6.0e-98 361.7 322 55.0
A05p06020 Brassica napus HOM05D004502 ORTHO05D005579 1.0e-97 360.9 318 55.3
VMungo0331G1775 Vigna mungo HOM05D004502 ORTHO05D005579 1.0e-97 360.9 322 55.3
Glyma.18G235400 Glycine max HOM05D004502 ORTHO05D005579 1.3e-97 360.5 321 54.2
Nitab4.5_0000583g0350 Nicotiana tabacum HOM05D004502 ORTHO05D005579 2.3e-97 359.8 321 57.0
Phvul.010G100800 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 3.0e-97 359.4 323 56.0
Psat3g107400 Pisum sativum HOM05D004502 ORTHO05D005579 3.9e-97 359.0 320 54.7
vmacro13259 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 3.9e-97 359.0 320 55.3
Cfa003897 Carpinus fangiana HOM05D004502 ORTHO05D005579 5.1e-97 358.6 294 57.8
BraA05t19565Z Brassica rapa HOM05D004502 ORTHO05D005579 6.7e-97 358.2 318 55.0
RcHm_v2.0_Chr1g0356801 Rosa chinensis HOM05D004502 ORTHO05D005579 1.5e-96 357.1 330 54.2
Sp4g28120 Schrenkiella parvula HOM05D004502 ORTHO05D005579 1.5e-96 357.1 318 54.4
Phvul.008G060500 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 2.5e-96 356.3 319 55.2
VMungo1383G3442 Vigna mungo HOM05D004502 ORTHO05D005579 3.3e-96 355.9 319 55.5
arahy.Tifrunner.gnm1.ann1.04AGHE Arachis hypogaea HOM05D004502 ORTHO05D005579 1.3e-95 354.0 323 53.9
TPR.G37813 Trifolium pratense HOM05D004502 ORTHO05D005579 1.3e-95 354.0 321 54.8
arahy.Tifrunner.gnm1.ann1.V8X9PU Arachis hypogaea HOM05D004502 ORTHO05D005579 2.1e-95 353.2 318 55.3
AUR62004387 Chenopodium quinoa HOM05D004502 ORTHO05D005579 2.8e-95 352.8 321 54.5
arahy.Tifrunner.gnm1.ann1.C1BLFK Arachis hypogaea HOM05D004502 ORTHO05D005579 4.8e-95 352.1 323 53.6
FvH4_7g14850 Fragaria vesca HOM05D004502 ORTHO05D005579 8.1e-95 351.3 330 53.9
FAN01G2073 Fragaria x ananassa HOM05D004502 ORTHO05D005579 1.4e-94 350.5 330 53.9
Lalb_Chr17g0339421 Lupinus albus HOM05D004502 ORTHO05D005579 1.4e-94 350.5 319 55.8
Sc01g0003530 Simmondsia chinensis HOM05D004502 ORTHO05D005579 1.8e-94 350.1 320 53.4
HPP92_022633 Vanilla planifolia HOM05D004502 ORTHO05D005579 2.4e-94 349.7 324 55.2
ATR0680G297 Amborella trichopoda HOM05D004502 ORTHO05D005579 3.1e-94 349.4 321 55.5
FAN10G2351 Fragaria x ananassa HOM05D004502 ORTHO05D005579 4.0e-94 349.0 330 53.0
FAN10G2492 Fragaria x ananassa HOM05D004502 ORTHO05D005579 4.0e-94 349.0 330 53.0
FAN06G0667 Fragaria x ananassa HOM05D004502 ORTHO05D005579 5.3e-94 348.6 330 53.6
TPR.G17909 Trifolium pratense HOM05D004502 ORTHO05D005579 5.3e-94 348.6 326 54.3
Zm00001eb222430 Zea mays HOM05D004502 ORTHO05D005579 2.6e-93 346.3 327 53.2
ClCG06G003550 Citrullus lanatus HOM05D004502 ORTHO05D005579 4.5e-93 345.5 326 55.5
Os10g0446200 Oryza sativa ssp. japonica HOM05D004502 ORTHO05D005579 4.2e-91 339.0 327 51.4
Gohir.A11G090500 Gossypium hirsutum HOM05D004502 ORTHO05D005579 1.2e-90 337.4 274 59.5
Duzib138G1080 Durio zibethinus HOM05D004502 ORTHO05D005579 2.1e-90 336.7 274 60.6
CANSAT56G0477 Cannabis sativa HOM05D004502 ORTHO05D005579 3.5e-90 335.9 274 57.7
Aqoxy7G00260 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 7.9e-90 334.7 349 50.4
FAN06G1095 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.5e-88 329.7 373 47.7
QL12p032431 Quercus lobata HOM05D004502 ORTHO05D005579 7.4e-88 328.2 318 51.9
AUR62022593 Chenopodium quinoa HOM05D004502 ORTHO05D005579 2.5e-75 286.6 261 54.4
TWI60G0172 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 5.5e-75 285.4 306 49.3
MBI18_g32047_MAGBIO Magnolia biondii HOM05D004502 ORTHO05D005579 5.3e-70 268.9 357 43.7
Ca_23605_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 6.9e-70 268.5 227 57.7
Cc08_g14990 Coffea canephora HOM05D004502 ORTHO05D005579 2.2e-68 263.5 319 44.5
COL.COLO4_34496 Corchorus olitorius HOM05D004502 ORTHO05D005579 1.4e-67 260.8 293 46.8
Ca_00829_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 1.9e-67 260.4 223 57.4
Prupe.2G173600 Prunus persica HOM05D004502 ORTHO05D005579 2.5e-67 260.0 205 60.5
SHI13432 Sapria himalayana HOM05D004502 ORTHO05D005579 3.3e-64 249.6 322 43.2
Gohir.D08G153200 Gossypium hirsutum HOM05D004502 ORTHO05D005579 2.4e-62 243.4 195 63.1
FAN03G0719 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.9e-60 236.5 231 53.2
Psat4g212960 Pisum sativum HOM05D004502 ORTHO05D005579 8.5e-60 235.0 183 61.2
AUR62010714 Chenopodium quinoa HOM05D004502 ORTHO05D005579 1.2e-53 214.5 304 37.8
Pp3c10_11170 Physcomitrium patens HOM05D004502 ORTHO05D005579 9.4e-51 204.9 298 37.2
Mapoly0035s0107 Marchantia polymorpha HOM05D004502 ORTHO05D005579 1.3e-47 194.5 305 36.4
COL.COLO4_28934 Corchorus olitorius HOM05D004502 ORTHO05D005579 3.1e-46 189.9 183 52.5
vmacro20915 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 5.3e-46 189.1 134 65.7
vmacro20916 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 1.6e-45 187.6 184 53.8
Aqoxy7G00261 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 1.9e-43 180.6 199 47.2
Haze_08811 Corylus avellana HOM05D004502 ORTHO05D005579 5.7e-40 169.1 319 34.5
MD01G1067000 Malus domestica HOM05D004502 ORTHO05D005579 7.5e-40 168.7 179 49.2
EL10Ac1g00390 Beta vulgaris HOM05D004502 ORTHO05D005579 1.2e-32 144.8 339 32.4
CBR_g17145 Chara braunii HOM05D004502 ORTHO05D005579 1.4e-25 121.3 133 40.6
MD01G1067200 Malus domestica HOM05D004502 ORTHO05D005579 3.4e-24 116.7 98 55.1
CDE06G0272 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 8.6e-20 102.1 109 55.0
Hund14845 Selenicereus undatus HOM05D004502 ORTHO05D005579 8.6e-20 102.1 106 48.1
SEGI_07374 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 2.8e-18 97.1 100 46.0
CDE06G0820 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 9.8e-16 88.6 63 58.7
Hund14837 Selenicereus undatus HOM05D004502 ORTHO05D005579 3.2e-14 83.6 100 45.0
SEGI_31877 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 6.6e-12 75.9 63 49.2
Hund14846 Selenicereus undatus HOM05D004502 ORTHO05D005579 6.8e-09 65.9 51 54.9
arahy.Tifrunner.gnm1.ann1.R57FTB Arachis hypogaea HOM05D004502 ORTHO05D002623 3.4e-08 63.5 35 80.0
Thecc.03G282200 Theobroma cacao HOM05D004502 ORTHO05D005579 4.9e-07 59.7 55 45.5
CBR_g17143 Chara braunii HOM05D004502 ORTHO05D005579 1.4e-06 58.2 130 26.2


User provided reference genes

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