Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 4.9e-94 347.8 179 100.0
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 5.3e-64 248.1 185 73.0
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.5e-63 246.5 186 70.4
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 9.3e-61 237.3 185 71.9
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 9.3e-61 237.3 181 68.5
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 2.7e-60 235.7 177 71.2
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 6.0e-60 234.6 188 70.2
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 7.9e-60 234.2 180 66.1
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.3e-59 233.4 180 67.8
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.8e-59 233.0 187 69.5
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 3.9e-59 231.9 180 65.6
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 6.7e-59 231.1 186 66.7
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.9e-58 229.6 181 65.7
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.5e-58 229.2 183 66.7
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 3.3e-58 228.8 183 66.7
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 9.6e-58 227.3 180 68.3
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.6e-57 226.5 177 68.4
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 2.1e-57 226.1 178 65.7
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 2.8e-57 225.7 172 68.6
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 3.7e-57 225.3 185 64.9
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 6.2e-57 224.6 188 64.4
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 8.2e-57 224.2 170 68.8
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.4e-56 223.4 174 67.2
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 2.4e-56 222.6 174 67.2
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 2.4e-56 222.6 161 71.4
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 3.1e-56 222.2 193 63.7
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 3.1e-56 222.2 182 64.3
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 4.0e-56 221.9 176 69.3
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 4.0e-56 221.9 179 65.9
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.2e-55 220.3 183 63.9
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.5e-55 219.9 170 67.1
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 2.0e-55 219.5 181 66.9
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 2.0e-55 219.5 173 65.3
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 3.4e-55 218.8 175 66.3
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 7.6e-55 217.6 173 64.2
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 7.6e-55 217.6 173 64.2
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.0e-54 217.2 185 63.2
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 1.0e-54 217.2 174 66.7
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.0e-54 217.2 172 65.1
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 1.0e-54 217.2 172 64.0
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.7e-54 216.5 173 68.2
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.2e-54 216.1 182 64.8
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 2.2e-54 216.1 173 67.6
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 2.9e-54 215.7 183 62.8
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 5.0e-54 214.9 176 66.5
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 5.0e-54 214.9 185 62.7
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 1.1e-53 213.8 176 61.4
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 1.9e-53 213.0 186 61.3
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 3.2e-53 212.2 172 66.3
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 5.5e-53 211.5 187 59.4
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 9.3e-53 210.7 198 59.1
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 9.3e-53 210.7 178 63.5
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.6e-52 209.9 188 60.6
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 2.7e-52 209.1 188 60.6
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 3.5e-52 208.8 176 63.6
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.6e-52 208.4 188 60.6
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 4.6e-52 208.4 189 65.1
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 1.0e-51 207.2 188 59.6
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 1.0e-51 207.2 175 64.0
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 1.3e-51 206.8 187 61.5
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 2.3e-51 206.1 178 61.8
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 3.0e-51 205.7 188 60.1
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 3.9e-51 205.3 181 60.8
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 3.9e-51 205.3 177 58.8
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 3.9e-51 205.3 193 59.1
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 5.1e-51 204.9 176 63.6
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 6.7e-51 204.5 186 60.8
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 8.7e-51 204.1 177 62.7
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 8.7e-51 204.1 185 62.2
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.9e-50 203.0 180 65.0
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 4.3e-50 201.8 175 62.9
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 5.7e-50 201.4 129 75.2
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.3e-49 200.3 178 61.2
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 2.2e-49 199.5 179 62.0
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.8e-49 199.1 183 61.2
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 3.7e-49 198.7 181 60.8
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.7e-49 198.7 185 60.0
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.8e-49 198.4 184 59.2
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 1.1e-48 197.2 181 59.1
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.8e-48 196.4 186 59.1
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.8e-48 196.4 156 66.0
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.4e-48 196.1 158 67.7
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.1e-48 195.7 177 61.0
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 9.0e-48 194.1 184 58.7
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 9.0e-48 194.1 113 85.0
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 9.0e-48 194.1 135 71.1
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.2e-47 193.7 173 58.4
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.5e-47 193.4 113 85.0
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 4.5e-47 191.8 113 84.1
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 4.5e-47 191.8 183 57.4
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 4.5e-47 191.8 164 60.4
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 5.9e-47 191.4 179 58.7
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.0e-46 190.7 183 59.0
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 5.0e-46 188.3 183 56.3
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 5.0e-46 188.3 112 82.1
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.2e-45 185.3 118 74.6
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 7.2e-45 184.5 179 58.1
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 9.4e-45 184.1 113 77.9
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 1.2e-44 183.7 118 78.0
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.4e-43 180.3 112 76.8
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.4e-43 180.3 237 47.7
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.1e-42 177.2 145 64.8
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 7.4e-42 174.5 148 64.9
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 9.7e-42 174.1 148 64.9
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.7e-41 172.2 177 55.9
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.8e-40 169.9 134 64.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.4e-40 169.5 177 53.1
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.0e-39 166.4 183 53.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.4e-35 153.7 98 76.5
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-33 147.1 92 73.9
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 1.7e-33 146.7 89 83.1
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 2.2e-33 146.4 110 61.8
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 8.2e-33 144.4 92 76.1
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.1e-32 144.1 92 72.8
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 2.0e-31 139.8 129 54.3
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.2e-28 130.6 149 46.3
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 1.1e-26 124.0 70 81.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.5e-26 123.6 70 81.4
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.5e-26 123.6 89 64.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 2.0e-26 123.2 101 56.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.7e-25 120.2 97 58.8
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 8.2e-25 117.9 119 52.1
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 5.3e-24 115.2 94 56.4
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 9.1e-24 114.4 127 52.8
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 5.0e-22 108.6 93 58.1
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 6.5e-22 108.2 109 50.5
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 1.3e-17 94.0 92 52.2


User provided reference genes

Program Settings