Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 3.4e-259 897.9 478 100.0
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 1.0e-186 657.1 455 71.4
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 8.5e-186 654.1 432 73.1
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 8.5e-186 654.1 432 73.1
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.9e-185 652.9 455 72.1
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 5.5e-185 651.4 455 71.0
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.2e-184 650.2 455 71.4
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 1.6e-184 649.8 455 71.4
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 2.1e-184 649.4 455 72.1
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.0e-183 647.1 455 71.4
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 3.0e-183 645.6 455 70.5
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 5.2e-183 644.8 432 72.9
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 5.2e-183 644.8 432 73.6
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 5.2e-183 644.8 455 70.1
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 6.8e-183 644.4 432 72.9
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 6.8e-183 644.4 431 73.8
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.2e-182 643.7 431 73.5
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 1.2e-182 643.7 432 72.5
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 1.2e-182 643.7 455 71.9
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.5e-182 643.3 431 73.8
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.5e-182 643.3 455 69.9
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 2.0e-182 642.9 455 69.5
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 5.7e-182 641.3 432 73.1
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 5.7e-182 641.3 455 71.4
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 9.8e-182 640.6 455 69.7
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 9.8e-182 640.6 455 72.7
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 2.8e-181 639.0 432 73.1
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 2.8e-181 639.0 432 72.5
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 3.7e-181 638.6 455 70.3
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 4.8e-181 638.3 455 73.8
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 6.3e-181 637.9 455 69.7
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 6.3e-181 637.9 455 69.5
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 6.3e-181 637.9 455 69.5
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 8.3e-181 637.5 432 72.2
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 1.1e-180 637.1 432 72.0
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 1.1e-180 637.1 455 70.1
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 2.4e-180 636.0 432 71.5
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 4.1e-180 635.2 455 69.7
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 5.4e-180 634.8 455 69.2
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 9.1e-180 634.0 494 65.4
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 1.2e-179 633.6 455 68.8
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 1.2e-179 633.6 455 69.2
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 1.2e-179 633.6 432 72.0
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 1.6e-179 633.3 455 70.8
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 1.6e-179 633.3 403 77.7
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 5.9e-179 631.3 455 68.4
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 7.7e-179 630.9 473 67.9
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 3.8e-178 628.6 455 68.4
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 5.0e-178 628.2 432 70.6
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 5.0e-178 628.2 431 71.5
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 5.5e-177 624.8 432 72.0
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 7.2e-177 624.4 455 70.3
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 3.6e-176 622.1 431 71.2
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 6.1e-176 621.3 455 67.7
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 3.0e-175 619.0 432 71.1
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 3.1e-172 609.0 432 69.0
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 1.2e-171 607.1 455 67.5
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 8.6e-170 600.9 407 72.2
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 2.5e-169 599.4 520 60.8
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 3.3e-169 599.0 432 68.8
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 4.3e-169 598.6 405 72.3
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 7.2e-169 597.8 432 68.8
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 9.5e-169 597.4 432 68.8
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 9.5e-169 597.4 432 68.8
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 2.1e-168 596.3 455 66.2
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 2.3e-167 592.8 455 67.0
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 1.2e-166 590.5 404 70.8
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 9.8e-166 587.4 483 62.9
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 1.1e-164 583.9 455 64.8
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 1.4e-164 583.6 470 64.0
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 4.1e-164 582.0 456 64.5
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 1.6e-163 580.1 455 65.9
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 2.7e-163 579.3 432 66.2
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 3.5e-163 578.9 455 67.0
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 3.0e-162 575.9 455 66.8
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 5.0e-162 575.1 455 65.7
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 6.6e-162 574.7 455 66.6
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 6.6e-162 574.7 432 65.5
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 1.1e-161 573.9 407 68.6
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 2.5e-161 572.8 395 72.9
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 9.5e-161 570.9 455 65.5
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 1.6e-160 570.1 455 65.9
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 1.6e-160 570.1 455 65.7
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 1.8e-159 566.6 456 65.4
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 1.8e-159 566.6 456 65.4
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 1.8e-159 566.6 456 65.4
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 2.3e-159 566.2 456 65.4
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 4.0e-159 565.5 528 57.6
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 6.8e-159 564.7 497 59.6
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 2.0e-158 563.1 455 64.6
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 4.1e-156 555.4 411 65.7
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 5.4e-156 555.1 425 66.1
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 8.6e-154 547.7 425 64.9
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 2.9e-141 506.1 432 58.8
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 3.2e-140 502.7 432 58.1
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 3.5e-139 499.2 425 60.7
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 1.3e-133 480.7 456 53.9
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 2.2e-133 479.9 462 53.7
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 5.6e-129 465.3 332 72.0
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 8.1e-128 461.5 383 61.4
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 5.3e-127 458.8 432 52.3
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 7.6e-118 428.3 350 64.3
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 3.2e-116 422.9 284 73.9
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 2.5e-97 360.1 414 51.7
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 1.6e-83 314.3 248 59.3
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 2.6e-73 280.4 239 58.2
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 1.6e-70 271.2 443 36.3
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 1.8e-63 247.7 212 64.2
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 2.6e-57 227.3 178 68.0
Oeu032270.1 Olea europaea HOM05D005803 ORTHO05D008090 6.3e-56 222.6 141 72.3
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 6.3e-56 222.6 153 68.0
SEGI_31260 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 6.1e-51 206.1 180 52.8
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.9e-44 184.5 130 66.9
TPR.G29241 Trifolium pratense HOM05D005803 ORTHO05D008090 5.4e-31 139.8 91 68.1
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 2.8e-27 127.5 90 68.9
Hma1.2p1_0055F.1_g031500 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 6.8e-26 122.9 90 65.6
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 1.9e-23 114.8 155 43.9
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 1.9e-23 114.8 155 43.9
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 7.8e-22 109.4 180 38.3
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 5.1e-21 106.7 178 38.2
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 5.6e-20 103.2 77 63.6
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 1.4e-18 98.6 167 37.7
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 6.9e-18 96.3 57 78.9
THA.LOC104804009 Tarenaya hassleriana HOM05D003301 ORTHO05D003665 4.3e-12 77.0 304 25.7
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 1.3e-11 75.5 53 67.9
Hma1.2p1_1012F.1_g247600 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.6e-11 75.1 90 45.6
Phvul.004G048400 Phaseolus vulgaris HOM05D003301 ORTHO05D003665 6.2e-11 73.2 304 25.3
Lalb_Chr06g0174721 Lupinus albus HOM05D003301 ORTHO05D003665 1.1e-10 72.4 304 26.0
Atru.chr4.2782 Acer truncatum HOM05D005803 ORTHO05D008090 1.8e-10 71.6 84 46.4
GSVIVG01015317001 Vitis vinifera HOM05D003301 ORTHO05D003665 2.4e-10 71.2 289 25.6
AagrBONN_evm.TU.Sc2ySwM_368.1566 Anthoceros agrestis HOM05D004454 ORTHO05D005462 9.0e-10 69.3 158 27.8
SEGI_29512 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 9.0e-10 69.3 71 52.1
CiPaw.01G151200 Carya illinoinensis HOM05D003301 ORTHO05D003665 7.6e-09 66.2 194 27.8
Gohir.A02G118200 Gossypium hirsutum HOM05D003301 ORTHO05D003665 7.6e-09 66.2 291 23.7
Gohir.D03G058800 Gossypium hirsutum HOM05D003301 ORTHO05D003665 7.6e-09 66.2 291 24.1
Lsat_1_v5_gn_5_17960 Lactuca sativa HOM05D004454 ORTHO05D005462 1.3e-08 65.5 171 27.5
Gorai.003G062700 Gossypium raimondii HOM05D003301 ORTHO05D003665 2.2e-08 64.7 291 23.7
Pp3c11_22970 Physcomitrium patens HOM05D003301 ORTHO05D003665 2.2e-08 64.7 304 24.3
Duzib150G0839 Durio zibethinus HOM05D003301 ORTHO05D003665 8.4e-08 62.8 287 22.6
Peaxi162Scf00017g02211 Petunia axillaris HOM05D004454 ORTHO05D005462 1.1e-07 62.4 260 24.6
THA.LOC104810537 Tarenaya hassleriana HOM05D003301 ORTHO05D003665 1.9e-07 61.6 301 23.6
ECA246G3380 Erigeron canadensis HOM05D004454 ORTHO05D005462 2.4e-07 61.2 259 25.5
Medtr1g103750 Medicago truncatula HOM05D004454 ORTHO05D005462 4.2e-07 60.5 259 24.3
HanXRQChr05g0155441 Helianthus annuus HOM05D004454 ORTHO05D005462 9.3e-07 59.3 159 27.0
HanXRQChr14g0438801 Helianthus annuus HOM05D004454 ORTHO05D005462 4.6e-06 57.0 159 27.0
Thecc.06G098300 Theobroma cacao HOM05D003301 ORTHO05D003665 4.6e-06 57.0 287 23.3


User provided reference genes

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