Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9048 Utricularia gibba HOM05D003650 ORTHO05D004213 1.3e-193 679.5 337 100.0
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.1e-160 570.1 321 83.5
MSTRG.6431 Avicennia marina HOM05D003650 ORTHO05D004213 4.1e-158 561.6 335 77.9
SalBow6G5443 Salvia bowleyana HOM05D003650 ORTHO05D004213 2.2e-156 555.8 335 77.9
Migut.J01760 Erythranthe guttata HOM05D003650 ORTHO05D004213 1.2e-154 550.1 335 76.7
Oeu008162.1 Olea europaea HOM05D003650 ORTHO05D004213 4.3e-152 541.6 335 75.8
Nitab4.5_0005195g0070 Nicotiana tabacum HOM05D003650 ORTHO05D004213 7.4e-152 540.8 335 75.2
SGA_v2.0_scaffold69G23114 Striga asiatica HOM05D003650 ORTHO05D004213 2.4e-150 535.8 337 75.7
Cc06_g17090 Coffea canephora HOM05D003650 ORTHO05D004213 3.4e-149 531.9 335 72.8
Prupe.7G061300 Prunus persica HOM05D003650 ORTHO05D004213 4.5e-149 531.6 335 74.6
Peaxi162Scf00130g00016 Petunia axillaris HOM05D003650 ORTHO05D004213 2.2e-148 529.3 335 73.4
TWI77G0711 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 2.2e-148 529.3 338 71.9
CSS0010444 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 5.0e-148 528.1 335 71.9
Nitab4.5_0010636g0040 Nicotiana tabacum HOM05D003650 ORTHO05D004213 3.2e-147 525.4 358 69.6
Ah.13g076450 Amaranthus hybridus HOM05D003650 ORTHO05D004213 9.4e-147 523.9 335 73.1
Cpa.g.sc92.50 Carica papaya HOM05D003650 ORTHO05D004213 1.2e-146 523.5 335 71.6
Lj2A385G21 Lonicera japonica HOM05D003650 ORTHO05D004213 1.2e-146 523.5 336 72.0
Solyc04g015740.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 1.2e-146 523.5 335 73.1
RcHm_v2.0_Chr3g0482321 Rosa chinensis HOM05D003650 ORTHO05D004213 1.6e-146 523.1 335 71.9
TWI74G1194 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 2.1e-146 522.7 338 71.9
MD14G1071900 Malus domestica HOM05D003650 ORTHO05D004213 4.7e-146 521.5 335 72.8
vmacro07855 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 4.7e-146 521.5 335 73.1
CiPaw.09G038100 Carya illinoinensis HOM05D003650 ORTHO05D004213 6.1e-146 521.2 335 70.1
Ciclev10004391m.g Citrus clementina HOM05D003650 ORTHO05D004213 6.1e-146 521.2 337 71.2
Hund19149 Selenicereus undatus HOM05D003650 ORTHO05D004213 6.1e-146 521.2 335 71.9
PGSC0003DMG400027249 Solanum tuberosum HOM05D003650 ORTHO05D004213 6.1e-146 521.2 335 73.1
Actinidia09330 Actinidia chinensis HOM05D003650 ORTHO05D004213 7.9e-146 520.8 335 71.3
Sopen04g007820 Solanum pennellii HOM05D003650 ORTHO05D004213 7.9e-146 520.8 335 72.5
Atru.chr1.1095 Acer truncatum HOM05D003650 ORTHO05D004213 1.0e-145 520.4 337 71.5
EL10Ac3g07088 Beta vulgaris HOM05D003650 ORTHO05D004213 1.0e-145 520.4 335 72.8
Thecc.05G153700 Theobroma cacao HOM05D003650 ORTHO05D004213 1.4e-145 520.0 336 72.0
Aa31LG1G23780 Aethionema arabicum HOM05D003650 ORTHO05D004213 1.8e-145 519.6 337 71.2
FAN09G0940 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.8e-145 519.6 335 71.9
MD12G1073600 Malus domestica HOM05D003650 ORTHO05D004213 1.8e-145 519.6 336 72.6
AUR62026036 Chenopodium quinoa HOM05D003650 ORTHO05D004213 3.9e-145 518.5 335 72.8
GSVIVG01033278001 Vitis vinifera HOM05D003650 ORTHO05D004213 5.1e-145 518.1 335 70.7
AUR62024446 Chenopodium quinoa HOM05D003650 ORTHO05D004213 6.7e-145 517.7 335 72.5
FAN05G4085 Fragaria x ananassa HOM05D003650 ORTHO05D004213 8.8e-145 517.3 335 71.6
PGR004G2044 Punica granatum HOM05D003650 ORTHO05D004213 1.5e-144 516.5 335 70.1
Sed0014274 Sechium edule HOM05D003650 ORTHO05D004213 1.5e-144 516.5 335 71.0
TAR636G3054 Trochodendron aralioides HOM05D003650 ORTHO05D004213 1.5e-144 516.5 336 70.5
Actinidia39226 Actinidia chinensis HOM05D003650 ORTHO05D004213 2.0e-144 516.2 335 71.3
DCAR_013601 Daucus carota HOM05D003650 ORTHO05D004213 2.0e-144 516.2 335 71.0
AT2G41770 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 2.6e-144 515.8 337 71.2
CARHR136860 Cardamine hirsuta HOM05D003650 ORTHO05D004213 3.3e-144 515.4 337 70.9
Eucgr.A02349 Eucalyptus grandis HOM05D003650 ORTHO05D004213 7.4e-144 514.2 335 71.9
FvH4_6g23790 Fragaria vesca HOM05D003650 ORTHO05D004213 7.4e-144 514.2 335 71.3
FAN14G5543 Fragaria x ananassa HOM05D003650 ORTHO05D004213 7.4e-144 514.2 335 71.3
Hma1.2p1_2002F.1_g310720 Hydrangea macrophylla HOM05D003650 ORTHO05D004213 7.4e-144 514.2 335 71.0
Manes.09G021900 Manihot esculenta HOM05D003650 ORTHO05D004213 7.4e-144 514.2 335 70.4
Sc13g0001770 Simmondsia chinensis HOM05D003650 ORTHO05D004213 9.7e-144 513.8 338 71.3
QL07p000311 Quercus lobata HOM05D003650 ORTHO05D004213 1.3e-143 513.5 335 70.7
COL.COLO4_28278 Corchorus olitorius HOM05D003650 ORTHO05D004213 1.7e-143 513.1 335 69.6
Carub.0004s2405 Capsella rubella HOM05D003650 ORTHO05D004213 2.2e-143 512.7 337 70.9
MELO3C009717.2 Cucumis melo HOM05D003650 ORTHO05D004213 3.7e-143 511.9 335 71.6
AT3G57420 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 4.8e-143 511.5 338 70.7
FAN02G1020 Fragaria x ananassa HOM05D003650 ORTHO05D004213 4.8e-143 511.5 335 70.7
THA.LOC104802108 Tarenaya hassleriana HOM05D003650 ORTHO05D004213 4.8e-143 511.5 339 70.8
AL4G40080 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 6.3e-143 511.1 337 70.6
TAR633G1518 Trochodendron aralioides HOM05D003650 ORTHO05D004213 6.3e-143 511.1 336 68.8
Manes.08G050700 Manihot esculenta HOM05D003650 ORTHO05D004213 1.1e-142 510.4 335 70.7
CAN.G676.68 Capsicum annuum HOM05D003650 ORTHO05D004213 1.4e-142 510.0 345 70.4
Duzib093G1511 Durio zibethinus HOM05D003650 ORTHO05D004213 1.8e-142 509.6 336 70.2
Thhalv10016286m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.8e-142 509.6 337 70.3
CiPaw.10G033200 Carya illinoinensis HOM05D003650 ORTHO05D004213 3.1e-142 508.8 335 70.1
ClCG10G016580 Citrullus lanatus HOM05D003650 ORTHO05D004213 3.1e-142 508.8 335 71.0
Potri.006G051000 Populus trichocarpa HOM05D003650 ORTHO05D004213 4.1e-142 508.4 337 70.3
Sp4g24040 Schrenkiella parvula HOM05D003650 ORTHO05D004213 7.0e-142 507.7 337 70.0
CANSAT80G0970 Cannabis sativa HOM05D003650 ORTHO05D004213 1.2e-141 506.9 335 69.6
BcaNung02835 Brassica carinata HOM05D003650 ORTHO05D004213 1.5e-141 506.5 337 68.8
BraA03t11559Z Brassica rapa HOM05D003650 ORTHO05D004213 1.5e-141 506.5 337 69.7
A05p02520 Brassica napus HOM05D003650 ORTHO05D004213 2.0e-141 506.1 337 68.8
C03p27940 Brassica napus HOM05D003650 ORTHO05D004213 2.0e-141 506.1 337 69.7
Duzib128G1026 Durio zibethinus HOM05D003650 ORTHO05D004213 2.0e-141 506.1 336 70.2
C04p02980 Brassica napus HOM05D003650 ORTHO05D004213 3.5e-141 505.4 337 69.1
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 3.5e-141 505.4 338 68.9
BraA05t19245Z Brassica rapa HOM05D003650 ORTHO05D004213 3.5e-141 505.4 337 68.8
Lsat_1_v5_gn_9_29041 Lactuca sativa HOM05D003650 ORTHO05D004213 3.5e-141 505.4 336 69.6
A03p23420 Brassica napus HOM05D003650 ORTHO05D004213 5.9e-141 504.6 337 69.4
Duzib205G0897 Durio zibethinus HOM05D003650 ORTHO05D004213 7.7e-141 504.2 336 69.0
BolC3t15166H Brassica oleracea HOM05D003650 ORTHO05D004213 1.0e-140 503.8 337 69.4
Ah.04g151780 Amaranthus hybridus HOM05D003650 ORTHO05D004213 1.3e-140 503.4 348 69.3
Gohir.A09G122300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.7e-140 503.1 336 68.5
HanXRQChr10g0288771 Helianthus annuus HOM05D003650 ORTHO05D004213 1.7e-140 503.1 336 69.9
Carub.0005s2426 Capsella rubella HOM05D003650 ORTHO05D004213 2.2e-140 502.7 338 69.8
Sabra06G0035700 Salix brachista HOM05D003650 ORTHO05D004213 2.9e-140 502.3 335 69.9
AL5G38950 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 5.0e-140 501.5 338 69.8
Gorai.006G136600 Gossypium raimondii HOM05D003650 ORTHO05D004213 5.0e-140 501.5 336 68.5
Aqoxy2G00151 Aquilegia oxysepala HOM05D003650 ORTHO05D004213 6.5e-140 501.1 336 68.8
Thhalv10005801m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.1e-139 500.4 339 69.0
Gohir.D09G118300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.5e-139 500.0 336 67.9
Sabra16G0058400 Salix brachista HOM05D003650 ORTHO05D004213 5.5e-139 498.0 335 68.7
Glyma.10G097600 Glycine max HOM05D003650 ORTHO05D004213 9.4e-139 497.3 336 67.9
VMungo0720G2955 Vigna mungo HOM05D003650 ORTHO05D004213 9.4e-139 497.3 336 68.2
Lju124C41T4 Lonicera japonica HOM05D003650 ORTHO05D004213 1.2e-138 496.9 335 70.4
Gohir.A09G122200 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.6e-138 496.5 336 67.3
Gohir.D09G118400 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.6e-138 496.5 336 68.2
Phvul.007G252800 Phaseolus vulgaris HOM05D003650 ORTHO05D004213 1.6e-138 496.5 336 68.2
Potri.016G055700 Populus trichocarpa HOM05D003650 ORTHO05D004213 2.7e-138 495.7 335 68.4
Lj5g0024914 Lotus japonicus HOM05D003650 ORTHO05D004213 3.6e-138 495.4 335 67.5
Sp5g05180 Schrenkiella parvula HOM05D003650 ORTHO05D004213 3.6e-138 495.4 338 69.5
ECA247G3671 Erigeron canadensis HOM05D003650 ORTHO05D004213 6.1e-138 494.6 336 68.5
arahy.Tifrunner.gnm1.ann1.MS35EQ Arachis hypogaea HOM05D003650 ORTHO05D004213 1.4e-137 493.4 336 67.3
arahy.Tifrunner.gnm1.ann1.YDMB1U Arachis hypogaea HOM05D003650 ORTHO05D004213 2.3e-137 492.7 336 67.3
CSS0035654 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 1.1e-136 490.3 336 67.9
Ca_26017_v3 Cicer arietinum L. HOM05D003650 ORTHO05D004213 1.1e-136 490.3 335 65.7
Psat6g120000 Pisum sativum HOM05D003650 ORTHO05D004213 1.5e-136 490.0 336 66.7
CSS0046501 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 7.4e-136 487.6 336 67.3
Glyma.02G184100 Glycine max HOM05D003650 ORTHO05D004213 9.7e-136 487.3 336 67.0
CARHR167620 Cardamine hirsuta HOM05D003650 ORTHO05D004213 2.2e-135 486.1 340 66.8
Nn7g36273 Nelumbo nucifera HOM05D003650 ORTHO05D004213 2.8e-135 485.7 336 66.7
Rhsim07G0058200 Rhododendron simsii HOM05D003650 ORTHO05D004213 4.8e-135 485.0 336 67.3
PSO339G5560 Papaver somniferum HOM05D003650 ORTHO05D004213 6.3e-135 484.6 337 67.7
Haze_19859 Corylus avellana HOM05D003650 ORTHO05D004213 4.1e-134 481.9 416 58.2
PSO384G3418 Papaver somniferum HOM05D003650 ORTHO05D004213 1.2e-133 480.3 337 66.5
Rhsim03G0022300 Rhododendron simsii HOM05D003650 ORTHO05D004213 2.0e-133 479.6 402 59.2
TPR.G10642 Trifolium pratense HOM05D003650 ORTHO05D004213 5.9e-133 478.0 336 64.6
GSVIVG01032164001 Vitis vinifera HOM05D003650 ORTHO05D004213 2.2e-132 476.1 338 65.1
vmacro13691 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 1.2e-130 470.3 337 65.9
Prupe.2G020200 Prunus persica HOM05D003650 ORTHO05D004213 4.7e-130 468.4 338 64.2
Nitab4.5_0000707g0190 Nicotiana tabacum HOM05D003650 ORTHO05D004213 8.0e-130 467.6 335 66.3
Nitab4.5_0008441g0020 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.4e-129 466.8 335 66.3
Sopen01g034570 Solanum pennellii HOM05D003650 ORTHO05D004213 1.8e-129 466.5 335 65.7
Lalb_Chr06g0173451 Lupinus albus HOM05D003650 ORTHO05D004213 3.0e-129 465.7 336 64.6
ECA248G2213 Erigeron canadensis HOM05D003650 ORTHO05D004213 5.2e-129 464.9 336 64.3
HanXRQChr01g0008741 Helianthus annuus HOM05D003650 ORTHO05D004213 6.8e-129 464.5 336 64.0
Peaxi162Scf00694g00117 Petunia axillaris HOM05D003650 ORTHO05D004213 6.8e-129 464.5 335 64.5
Solyc01g087600.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 2.0e-128 463.0 335 64.8
CAN.G219.62 Capsicum annuum HOM05D003650 ORTHO05D004213 7.5e-128 461.1 335 65.1
Rhsim03G0021200 Rhododendron simsii HOM05D003650 ORTHO05D004213 2.2e-127 459.5 476 50.2
Oeu027406.1 Olea europaea HOM05D003650 ORTHO05D004213 4.8e-127 458.4 337 65.3
PGSC0003DMG400006853 Solanum tuberosum HOM05D003650 ORTHO05D004213 3.1e-126 455.7 359 61.3
RcHm_v2.0_Chr1g0317301 Rosa chinensis HOM05D003650 ORTHO05D004213 2.7e-125 452.6 339 62.8
CANSAT80G2225 Cannabis sativa HOM05D003650 ORTHO05D004213 1.0e-124 450.7 338 64.2
Lalb_Chr20g0110481 Lupinus albus HOM05D003650 ORTHO05D004213 1.3e-124 450.3 335 61.8
Cc02_g29000 Coffea canephora HOM05D003650 ORTHO05D004213 2.2e-124 449.5 335 62.1
MD07G1018300 Malus domestica HOM05D003650 ORTHO05D004213 2.2e-124 449.5 338 60.7
ATR0626G026 Amborella trichopoda HOM05D003650 ORTHO05D004213 1.9e-123 446.4 340 64.4
Lsat_1_v5_gn_5_161461 Lactuca sativa HOM05D003650 ORTHO05D004213 7.2e-123 444.5 338 62.1
CDE07G0124 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 6.1e-122 441.4 337 62.6
Zm00001eb287230 Zea mays HOM05D003650 ORTHO05D004213 1.8e-121 439.9 338 62.7
Os05g0391200 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 5.2e-121 438.3 338 63.3
FvH4_7g01460 Fragaria vesca HOM05D003650 ORTHO05D004213 9.8e-120 434.1 339 60.5
FAN06G0077 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.1e-118 430.6 339 60.2
HPP92_010728 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.6e-117 426.8 338 60.1
CANSAT80G1317 Cannabis sativa HOM05D003650 ORTHO05D004213 5.0e-116 421.8 263 74.1
Sed0014161 Sechium edule HOM05D003650 ORTHO05D004213 1.5e-115 420.2 351 59.5
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 6.1e-114 414.8 340 59.7
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.4e-110 403.7 339 56.9
MELO3C023570.2 Cucumis melo HOM05D003650 ORTHO05D004213 1.6e-106 390.2 339 54.9
Zm00001eb329540 Zea mays HOM05D003650 ORTHO05D004213 2.8e-106 389.4 338 55.0
CsaV3_7G030820 Cucumis sativus L. HOM05D003650 ORTHO05D004213 1.4e-105 387.1 339 55.2
Os07g0656400 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 2.3e-105 386.3 340 54.7
ClCG09G003920 Citrullus lanatus HOM05D003650 ORTHO05D004213 4.0e-105 385.6 339 54.9
Sed0006713 Sechium edule HOM05D003650 ORTHO05D004213 3.4e-104 382.5 340 54.1
Dinv39600 Davidia involucrata HOM05D003650 ORTHO05D004213 2.3e-92 343.2 266 62.4
FAN10G4002 Fragaria x ananassa HOM05D003650 ORTHO05D004213 8.6e-92 341.3 340 51.8
Dinv12480 Davidia involucrata HOM05D003650 ORTHO05D004213 1.3e-87 327.4 181 82.9
Nn2g15253 Nelumbo nucifera HOM05D003650 ORTHO05D004213 9.2e-86 321.2 181 80.7
Dinv09321 Davidia involucrata HOM05D003650 ORTHO05D004213 5.2e-81 305.4 181 77.3
CDE11G0341 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 5.4e-78 295.4 190 73.7
CDE11G0464 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 6.0e-77 292.0 305 50.2
AL4G39870 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 1.1e-73 281.2 167 77.8
Gorai.006G136700 Gossypium raimondii HOM05D003650 ORTHO05D004213 5.4e-70 268.9 336 42.0
Oeu023110.1 Olea europaea HOM05D003650 ORTHO05D004213 1.9e-67 260.4 138 88.4
Pp3c14_20380 Physcomitrium patens HOM05D003650 ORTHO05D004213 2.8e-66 256.5 341 37.8
Pp3c17_18550 Physcomitrium patens HOM05D003650 ORTHO05D004213 4.5e-64 249.2 341 36.4
SMO329G0078 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 1.3e-63 247.7 340 37.6
Mapoly0004s0304 Marchantia polymorpha HOM05D003650 ORTHO05D004213 1.8e-60 237.3 340 34.7
Medtr0121s0010 Medicago truncatula HOM05D003650 ORTHO05D004213 1.6e-58 230.7 138 76.8
SMO165G0114 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 1.4e-54 217.6 341 36.4
Oeu022754.1 Olea europaea HOM05D003650 ORTHO05D004213 3.2e-46 189.9 133 65.4
Actinidia02535 Actinidia chinensis HOM05D003650 ORTHO05D004213 4.5e-40 169.5 138 54.3
Actinidia19412 Actinidia chinensis HOM05D003650 ORTHO05D004213 5.9e-32 142.5 93 71.0
Lalb_Chr21g0316481 Lupinus albus HOM05D003650 ORTHO05D004213 3.6e-29 133.3 117 58.1
CsaV3_3G039750 Cucumis sativus L. HOM05D003650 ORTHO05D004213 6.1e-29 132.5 69 88.4
CARHR167380 Cardamine hirsuta HOM05D003650 ORTHO05D004213 3.0e-28 130.2 76 77.6


User provided reference genes

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